RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 MCM4P33991 863 aa16.18■□□□□ 0.18
VGLL3-202ENST00000398399 JAKMIP3Q5VZ66 844 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 GGT6Q6P531 493 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 IVLP07476 585 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 PRIMPOLQ96LW4 560 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
VGLL3-202ENST00000398399 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
VGLL3-202ENST00000398399 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
VGLL3-202ENST00000398399 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
VGLL3-202ENST00000398399 KIF5CO60282 957 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
VGLL3-202ENST00000398399 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 CCDC183Q5T5S1 534 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 DESP17661 470 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
VGLL3-202ENST00000398399 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
VGLL3-202ENST00000398399 KIAA1328Q86T90 577 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 SKIDA1Q1XH10 827 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 TAX1BP1Q86VP1 789 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 FOSBP53539 338 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 FAM193AP78312 1265 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
VGLL3-202ENST00000398399 CASQ1P31415 396 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
VGLL3-202ENST00000398399 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
VGLL3-202ENST00000398399 PAXBP1Q9Y5B6 917 aa16.14■□□□□ 0.17
VGLL3-202ENST00000398399 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
VGLL3-202ENST00000398399 NF2P35240 595 aa16.14■□□□□ 0.17
VGLL3-202ENST00000398399 GSDMDP57764 484 aa16.14■□□□□ 0.17
VGLL3-202ENST00000398399 MAP2K1Q02750 393 aaPredicted RBP16.13■□□□□ 0.17
VGLL3-202ENST00000398399 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
VGLL3-202ENST00000398399 MYZAPP0CAP1 466 aa16.13■□□□□ 0.17
VGLL3-202ENST00000398399 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
VGLL3-202ENST00000398399 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
VGLL3-202ENST00000398399 STAMBPO95630 424 aa16.12■□□□□ 0.17
VGLL3-202ENST00000398399 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.17
VGLL3-202ENST00000398399 NKTRP30414 1462 aaKnown RBP16.12■□□□□ 0.17
VGLL3-202ENST00000398399 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
VGLL3-202ENST00000398399 PPM1EQ8WY54 764 aa16.12■□□□□ 0.17
VGLL3-202ENST00000398399 KRT32Q14532 448 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 SYCE3A1L190 88 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 CTAGE5O15320 804 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 DHX29Q7Z478 1369 aaKnown RBP16.11■□□□□ 0.17
VGLL3-202ENST00000398399 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 TUBB4BP68371 445 aa16.11■□□□□ 0.17
VGLL3-202ENST00000398399 SPECC1LQ69YQ0 1117 aa16.1■□□□□ 0.17
VGLL3-202ENST00000398399 CUL7Q14999 1698 aa16.1■□□□□ 0.17
VGLL3-202ENST00000398399 SMC1AQ14683 1233 aaKnown RBP16.1■□□□□ 0.17
VGLL3-202ENST00000398399 TAF4BQ92750 862 aa16.1■□□□□ 0.17
VGLL3-202ENST00000398399 GNAI2P04899 355 aa16.1■□□□□ 0.17
VGLL3-202ENST00000398399 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
VGLL3-202ENST00000398399 CCT4P50991 539 aaKnown RBP16.1■□□□□ 0.17
VGLL3-202ENST00000398399 LARP1BQ659C4 914 aaKnown RBP16.1■□□□□ 0.17
VGLL3-202ENST00000398399 VPS36Q86VN1 386 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 ELL2O00472 640 aaPredicted RBP16.09■□□□□ 0.17
VGLL3-202ENST00000398399 WASF1Q92558 559 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 RAD21O60216 631 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
VGLL3-202ENST00000398399 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 CCDC175P0C221 793 aa16.09■□□□□ 0.17
VGLL3-202ENST00000398399 EHBP1Q8NDI1 1231 aa16.08■□□□□ 0.17
VGLL3-202ENST00000398399 KRT222Q8N1A0 295 aa16.08■□□□□ 0.17
VGLL3-202ENST00000398399 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.17
VGLL3-202ENST00000398399 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
VGLL3-202ENST00000398399 CEP63Q96MT8 703 aa16.08■□□□□ 0.16
VGLL3-202ENST00000398399 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
VGLL3-202ENST00000398399 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
VGLL3-202ENST00000398399 SPA17Q15506 151 aa16.08■□□□□ 0.16
VGLL3-202ENST00000398399 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
VGLL3-202ENST00000398399 PPP1R12BO60237 982 aaPredicted RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
VGLL3-202ENST00000398399 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
VGLL3-202ENST00000398399 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
VGLL3-202ENST00000398399 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
VGLL3-202ENST00000398399 GTPBP4Q9BZE4 634 aaKnown RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
VGLL3-202ENST00000398399 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
VGLL3-202ENST00000398399 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
VGLL3-202ENST00000398399 GTF2A1P52655 376 aaPredicted RBP16.06■□□□□ 0.16
VGLL3-202ENST00000398399 CBX1P83916 185 aa16.06■□□□□ 0.16
VGLL3-202ENST00000398399 CETN2P41208 172 aa16.06■□□□□ 0.16
VGLL3-202ENST00000398399 NAA15Q9BXJ9 866 aaKnown RBP16.06■□□□□ 0.16
VGLL3-202ENST00000398399 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
VGLL3-202ENST00000398399 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
VGLL3-202ENST00000398399 TRIM21P19474 475 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms