RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ZNF316A6NFI3 1004 aaPredicted RBP34.69■■■■□ 3.14
TMEM55B-202ENST00000398020 CC2D1BQ5T0F9 858 aaKnown RBP34.69■■■■□ 3.14
TMEM55B-202ENST00000398020 MAP3K19Q56UN5 1328 aa34.68■■■■□ 3.14
TMEM55B-202ENST00000398020 TRPC5Q9UL62 973 aaPredicted RBP34.68■■■■□ 3.14
TMEM55B-202ENST00000398020 RGPD5Q99666 1765 aa34.67■■■■□ 3.14
TMEM55B-202ENST00000398020 ATRNO75882 1429 aa34.67■■■■□ 3.14
TMEM55B-202ENST00000398020 MORC1Q86VD1 984 aa34.66■■■■□ 3.14
TMEM55B-202ENST00000398020 EVA1CP58658 441 aa34.64■■■■□ 3.14
TMEM55B-202ENST00000398020 CCDC9Q9Y3X0 531 aaKnown RBP34.63■■■■□ 3.13
TMEM55B-202ENST00000398020 COL5A2P05997 1499 aaPredicted RBP34.63■■■■□ 3.13
TMEM55B-202ENST00000398020 AMPHP49418 695 aa34.62■■■■□ 3.13
TMEM55B-202ENST00000398020 VPS72Q15906 364 aa34.61■■■■□ 3.13
TMEM55B-202ENST00000398020 EMILIN1Q9Y6C2 1016 aa34.6■■■■□ 3.13
TMEM55B-202ENST00000398020 ABCC6O95255 1503 aa34.59■■■■□ 3.13
TMEM55B-202ENST00000398020 LARP1Q6PKG0 1096 aaKnown RBP34.59■■■■□ 3.13
TMEM55B-202ENST00000398020 MAP2P11137 1827 aaKnown RBP34.58■■■■□ 3.13
TMEM55B-202ENST00000398020 RXRBP28702 533 aa34.58■■■■□ 3.13
TMEM55B-202ENST00000398020 IP6K1Q92551 441 aa34.58■■■■□ 3.13
TMEM55B-202ENST00000398020 GJD4Q96KN9 370 aaPredicted RBP34.58■■■■□ 3.13
TMEM55B-202ENST00000398020 PPM1GO15355 546 aaPredicted RBP34.57■■■■□ 3.13
TMEM55B-202ENST00000398020 HOXC9P31274 260 aa34.57■■■■□ 3.13
TMEM55B-202ENST00000398020 PEAK1Q9H792 1746 aa34.57■■■■□ 3.13
TMEM55B-202ENST00000398020 NPC1L1Q9UHC9 1359 aa34.57■■■■□ 3.12
TMEM55B-202ENST00000398020 RBM6P78332 1123 aaKnown RBP34.57■■■■□ 3.12
TMEM55B-202ENST00000398020 GLI3P10071 1580 aa34.55■■■■□ 3.12
TMEM55B-202ENST00000398020 POLKQ9UBT6 870 aa34.55■■■■□ 3.12
TMEM55B-202ENST00000398020 USP35Q9P2H5 1018 aa34.54■■■■□ 3.12
TMEM55B-202ENST00000398020 RTL1A6NKG5 1358 aa34.53■■■■□ 3.12
TMEM55B-202ENST00000398020 SPATA31A5Q5VU36 1347 aa34.53■■■■□ 3.12
TMEM55B-202ENST00000398020 SPATA31A7Q8IWB4 1347 aa34.53■■■■□ 3.12
TMEM55B-202ENST00000398020 CSB-PGBD3P0DP91 1061 aa34.53■■■■□ 3.12
TMEM55B-202ENST00000398020 LTV1Q96GA3 475 aaPredicted RBP34.53■■■■□ 3.12
TMEM55B-202ENST00000398020 BLMP54132 1417 aaPredicted RBP34.52■■■■□ 3.12
TMEM55B-202ENST00000398020 ILDR2Q71H61 639 aa34.52■■■■□ 3.12
TMEM55B-202ENST00000398020 ANKRD24Q8TF21 1146 aa34.52■■■■□ 3.12
TMEM55B-202ENST00000398020 ERBB3P21860 1342 aa34.51■■■■□ 3.12
TMEM55B-202ENST00000398020 WDR17Q8IZU2 1322 aa34.51■■■■□ 3.12
TMEM55B-202ENST00000398020 HSP90AB2PQ58FF8 381 aa34.5■■■■□ 3.11
TMEM55B-202ENST00000398020 TOM1L2Q6ZVM7 507 aa34.5■■■■□ 3.11
TMEM55B-202ENST00000398020 FLT4P35916 1363 aa34.5■■■■□ 3.11
TMEM55B-202ENST00000398020 SPATA31A1Q5TZJ5 1347 aa34.49■■■■□ 3.11
TMEM55B-202ENST00000398020 CRB1P82279 1406 aa34.48■■■■□ 3.11
TMEM55B-202ENST00000398020 KIF24Q5T7B8 1368 aa34.46■■■■□ 3.11
TMEM55B-202ENST00000398020 FAM98CQ17RN3 349 aaKnown RBP34.45■■■■□ 3.11
TMEM55B-202ENST00000398020 INSRP06213 1382 aa34.44■■■■□ 3.1
TMEM55B-202ENST00000398020 NLRP2Q9NX02 1062 aa34.44■■■■□ 3.1
TMEM55B-202ENST00000398020 RGS12O14924 1447 aa34.43■■■■□ 3.1
TMEM55B-202ENST00000398020 SMG6Q86US8 1419 aaKnown RBP34.42■■■■□ 3.1
TMEM55B-202ENST00000398020 A0A0G2JS52 829 aa34.4■■■■□ 3.1
TMEM55B-202ENST00000398020 MYT1Q01538 1121 aa34.4■■■■□ 3.1
TMEM55B-202ENST00000398020 TCP11L2Q8N4U5 519 aa34.4■■■■□ 3.1
TMEM55B-202ENST00000398020 CARD10Q9BWT7 1032 aa34.39■■■■□ 3.1
TMEM55B-202ENST00000398020 RGPD2P0DJD1 1756 aa34.39■■■■□ 3.1
TMEM55B-202ENST00000398020 MTHFSP49914 203 aa34.38■■■■□ 3.09
TMEM55B-202ENST00000398020 CDK12Q9NYV4 1490 aaPredicted RBP34.38■■■■□ 3.09
TMEM55B-202ENST00000398020 FAM208AQ9UK61 1670 aaKnown RBP34.36■■■■□ 3.09
TMEM55B-202ENST00000398020 SEPT12Q8IYM1 358 aa34.35■■■■□ 3.09
TMEM55B-202ENST00000398020 ONECUT3O60422 494 aaPredicted RBP34.35■■■■□ 3.09
TMEM55B-202ENST00000398020 THRAP3Q9Y2W1 955 aaKnown RBP34.35■■■■□ 3.09
TMEM55B-202ENST00000398020 PARD3Q8TEW0 1356 aa34.34■■■■□ 3.09
TMEM55B-202ENST00000398020 NBPF6Q5VWK0 638 aa34.33■■■■□ 3.09
TMEM55B-202ENST00000398020 BARGINQ6ZT62 677 aa34.33■■■■□ 3.09
TMEM55B-202ENST00000398020 NBPF4Q96M43 638 aa34.33■■■■□ 3.09
TMEM55B-202ENST00000398020 PPP2R1AP30153 589 aa34.32■■■■□ 3.08
TMEM55B-202ENST00000398020 EIF4A2Q14240 407 aaKnown RBP34.31■■■■□ 3.08
TMEM55B-202ENST00000398020 USHBP1Q8N6Y0 703 aa34.31■■■■□ 3.08
TMEM55B-202ENST00000398020 THSD7AQ9UPZ6 1657 aa34.31■■■■□ 3.08
TMEM55B-202ENST00000398020 BRWD3Q6RI45 1802 aa34.28■■■■□ 3.08
TMEM55B-202ENST00000398020 WNK3Q9BYP7 1800 aa34.28■■■■□ 3.08
TMEM55B-202ENST00000398020 EYA1Q99502 592 aa34.25■■■■□ 3.07
TMEM55B-202ENST00000398020 RALBP1Q15311 655 aa34.24■■■■□ 3.07
TMEM55B-202ENST00000398020 DISP2A7MBM2 1401 aa34.23■■■■□ 3.07
TMEM55B-202ENST00000398020 EP400Q96L91 3159 aa34.21■■■■□ 3.07
TMEM55B-202ENST00000398020 PARP4Q9UKK3 1724 aaKnown RBP34.21■■■■□ 3.07
TMEM55B-202ENST00000398020 IL2RBP14784 551 aa34.21■■■■□ 3.07
TMEM55B-202ENST00000398020 IL13P35225 146 aa34.2■■■■□ 3.07
TMEM55B-202ENST00000398020 PRKRIP1Q9H875 184 aaPredicted RBP34.19■■■■□ 3.06
TMEM55B-202ENST00000398020 LRRC37A3O60309 1634 aa34.19■■■■□ 3.06
TMEM55B-202ENST00000398020 COL3A1P02461 1466 aaPredicted RBP34.19■■■■□ 3.06
TMEM55B-202ENST00000398020 KRT27Q7Z3Y8 459 aa34.19■■■■□ 3.06
TMEM55B-202ENST00000398020 CDCA7Q9BWT1 371 aaPredicted RBP34.19■■■■□ 3.06
TMEM55B-202ENST00000398020 DIAPH1O60610 1272 aaKnown RBP34.17■■■■□ 3.06
TMEM55B-202ENST00000398020 DDB1Q16531 1140 aa34.17■■■■□ 3.06
TMEM55B-202ENST00000398020 FAM182BQ5T319 152 aa34.17■■■■□ 3.06
TMEM55B-202ENST00000398020 MEGF6O75095 1541 aa34.16■■■■□ 3.06
TMEM55B-202ENST00000398020 IGSF1Q8N6C5 1336 aa34.16■■■■□ 3.06
TMEM55B-202ENST00000398020 CFAP53Q96M91 514 aa34.15■■■■□ 3.06
TMEM55B-202ENST00000398020 NCAPD2Q15021 1401 aa34.14■■■■□ 3.06
TMEM55B-202ENST00000398020 PDE3BQ13370 1112 aa34.14■■■■□ 3.06
TMEM55B-202ENST00000398020 MYBBP1AQ9BQG0 1328 aaKnown RBP34.13■■■■□ 3.05
TMEM55B-202ENST00000398020 RAPGEF4Q8WZA2 1011 aa34.13■■■■□ 3.05
TMEM55B-202ENST00000398020 RGPD1P0DJD0 1748 aa34.13■■■■□ 3.05
TMEM55B-202ENST00000398020 EXOC5O00471 708 aa34.12■■■■□ 3.05
TMEM55B-202ENST00000398020 AEBP1Q8IUX7 1158 aa34.11■■■■□ 3.05
TMEM55B-202ENST00000398020 TNS2Q63HR2 1409 aa34.09■■■■□ 3.05
TMEM55B-202ENST00000398020 U2SURPO15042 1029 aaKnown RBP34.09■■■■□ 3.05
TMEM55B-202ENST00000398020 TATP17735 454 aaPredicted RBP34.09■■■■□ 3.05
TMEM55B-202ENST00000398020 SULT6B1Q6IMI4 303 aa34.09■■■■□ 3.05
TMEM55B-202ENST00000398020 OVOS2A0A0G2JMS6 1433 aa34.08■■■■□ 3.05
TMEM55B-202ENST00000398020 HMOX1P09601 288 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms