RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CABLES1Q8TDN4 633 aa36.54■■■■□ 3.44
CPNE1-203ENST00000397442 RGPD1P0DJD0 1748 aa36.52■■■■□ 3.44
CPNE1-203ENST00000397442 UBAP1LF5GYI3 381 aa36.51■■■■□ 3.44
CPNE1-203ENST00000397442 IP6K1Q92551 441 aa36.51■■■■□ 3.44
CPNE1-203ENST00000397442 ABCA3Q99758 1704 aa36.49■■■■□ 3.43
CPNE1-203ENST00000397442 PIP4K2BP78356 416 aa36.48■■■■□ 3.43
CPNE1-203ENST00000397442 RUNDC1Q96C34 613 aa36.48■■■■□ 3.43
CPNE1-203ENST00000397442 PLEKHF1Q96S99 279 aa36.47■■■■□ 3.43
CPNE1-203ENST00000397442 PHLPP1O60346 1717 aa36.46■■■■□ 3.43
CPNE1-203ENST00000397442 COL16A1Q07092 1604 aaPredicted RBP36.46■■■■□ 3.43
CPNE1-203ENST00000397442 LRRC59Q96AG4 307 aaKnown RBP36.46■■■■□ 3.43
CPNE1-203ENST00000397442 ZC3H6P61129 1189 aaKnown RBP36.45■■■■□ 3.43
CPNE1-203ENST00000397442 APAF1O14727 1248 aa36.45■■■■□ 3.42
CPNE1-203ENST00000397442 FCHSD2O94868 740 aa36.45■■■■□ 3.42
CPNE1-203ENST00000397442 RSPH6AQ9H0K4 717 aa36.45■■■■□ 3.42
CPNE1-203ENST00000397442 ZBTB7CA1YPR0 619 aa36.43■■■■□ 3.42
CPNE1-203ENST00000397442 CPDO75976 1380 aa36.42■■■■□ 3.42
CPNE1-203ENST00000397442 COL18A1P39060 1754 aa36.42■■■■□ 3.42
CPNE1-203ENST00000397442 HMOX1P09601 288 aa36.42■■■■□ 3.42
CPNE1-203ENST00000397442 SALL2Q9Y467 1007 aaPredicted RBP36.42■■■■□ 3.42
CPNE1-203ENST00000397442 COL22A1Q8NFW1 1626 aaPredicted RBP36.39■■■■□ 3.42
CPNE1-203ENST00000397442 AXIN2Q9Y2T1 843 aa36.39■■■■□ 3.42
CPNE1-203ENST00000397442 RGPD5Q99666 1765 aa36.38■■■■□ 3.41
CPNE1-203ENST00000397442 TCP11L2Q8N4U5 519 aa36.38■■■■□ 3.41
CPNE1-203ENST00000397442 IGSF1Q8N6C5 1336 aa36.37■■■■□ 3.41
CPNE1-203ENST00000397442 KIAA0232Q92628 1395 aa36.37■■■■□ 3.41
CPNE1-203ENST00000397442 ABCC6O95255 1503 aa36.37■■■■□ 3.41
CPNE1-203ENST00000397442 PRKAR2BP31323 418 aa36.37■■■■□ 3.41
CPNE1-203ENST00000397442 EYA1Q99502 592 aa36.37■■■■□ 3.41
CPNE1-203ENST00000397442 AEBP1Q8IUX7 1158 aa36.36■■■■□ 3.41
CPNE1-203ENST00000397442 PNNQ9H307 717 aaKnown RBP36.36■■■■□ 3.41
CPNE1-203ENST00000397442 LTV1Q96GA3 475 aaPredicted RBP36.35■■■■□ 3.41
CPNE1-203ENST00000397442 SULT6B1Q6IMI4 303 aa36.34■■■■□ 3.41
CPNE1-203ENST00000397442 KDRP35968 1356 aa36.33■■■■□ 3.41
CPNE1-203ENST00000397442 ZNF521Q96K83 1311 aa36.32■■■■□ 3.41
CPNE1-203ENST00000397442 NGEFQ8N5V2 710 aa36.32■■■■□ 3.4
CPNE1-203ENST00000397442 CHRNA2Q15822 529 aa36.3■■■■□ 3.4
CPNE1-203ENST00000397442 MAPK8IP3Q9UPT6 1336 aa36.3■■■■□ 3.4
CPNE1-203ENST00000397442 RGPD2P0DJD1 1756 aa36.3■■■■□ 3.4
CPNE1-203ENST00000397442 PHACTR3Q96KR7 559 aa36.29■■■■□ 3.4
CPNE1-203ENST00000397442 RRP7AQ9Y3A4 280 aaKnown RBP36.29■■■■□ 3.4
CPNE1-203ENST00000397442 HAP1P54257 671 aaPredicted RBP36.28■■■■□ 3.4
CPNE1-203ENST00000397442 ANKRD24Q8TF21 1146 aa36.28■■■■□ 3.4
CPNE1-203ENST00000397442 LMO7Q8WWI1 1683 aa36.27■■■■□ 3.4
CPNE1-203ENST00000397442 NCBP3Q53F19 620 aaKnown RBP36.27■■■■□ 3.4
CPNE1-203ENST00000397442 NBPF6Q5VWK0 638 aa36.26■■■■□ 3.4
CPNE1-203ENST00000397442 NBPF4Q96M43 638 aa36.26■■■■□ 3.4
CPNE1-203ENST00000397442 PHF23Q9BUL5 403 aaPredicted RBP36.26■■■■□ 3.4
CPNE1-203ENST00000397442 ERBB3P21860 1342 aa36.26■■■■□ 3.39
CPNE1-203ENST00000397442 TMPOP42166 694 aaKnown RBP36.26■■■■□ 3.39
CPNE1-203ENST00000397442 CAMTA1Q9Y6Y1 1673 aa36.25■■■■□ 3.39
CPNE1-203ENST00000397442 PRDM11Q9NQV5 511 aa36.25■■■■□ 3.39
CPNE1-203ENST00000397442 NEUROD2Q15784 382 aa36.24■■■■□ 3.39
CPNE1-203ENST00000397442 NCAPD2Q15021 1401 aa36.23■■■■□ 3.39
CPNE1-203ENST00000397442 PDE3BQ13370 1112 aa36.23■■■■□ 3.39
CPNE1-203ENST00000397442 CCDC27Q2M243 656 aa36.22■■■■□ 3.39
CPNE1-203ENST00000397442 WWC1Q8IX03 1113 aa36.21■■■■□ 3.39
CPNE1-203ENST00000397442 NEFMP07197 916 aa36.2■■■■□ 3.39
CPNE1-203ENST00000397442 USHBP1Q8N6Y0 703 aa36.19■■■■□ 3.38
CPNE1-203ENST00000397442 CDCA7LQ96GN5 454 aa36.19■■■■□ 3.38
CPNE1-203ENST00000397442 FAM83GA6ND36 823 aa36.17■■■■□ 3.38
CPNE1-203ENST00000397442 NFE2L2Q16236 605 aa36.17■■■■□ 3.38
CPNE1-203ENST00000397442 FAM208AQ9UK61 1670 aaKnown RBP36.17■■■■□ 3.38
CPNE1-203ENST00000397442 TRIM35Q9UPQ4 493 aa36.16■■■■□ 3.38
CPNE1-203ENST00000397442 RIPK4P57078 832 aa36.16■■■■□ 3.38
CPNE1-203ENST00000397442 DLG5Q8TDM6 1919 aa36.14■■■■□ 3.38
CPNE1-203ENST00000397442 COL5A2P05997 1499 aaPredicted RBP36.13■■■■□ 3.37
CPNE1-203ENST00000397442 GOLGA2Q08379 1002 aa36.13■■■■□ 3.37
CPNE1-203ENST00000397442 COL14A1Q05707 1796 aaKnown RBP36.11■■■■□ 3.37
CPNE1-203ENST00000397442 SPINK5Q9NQ38 1064 aaPredicted RBP36.1■■■■□ 3.37
CPNE1-203ENST00000397442 JCADQ9P266 1359 aa36.08■■■■□ 3.37
CPNE1-203ENST00000397442 WDR63Q8IWG1 891 aa36.08■■■■□ 3.37
CPNE1-203ENST00000397442 NLRP2Q9NX02 1062 aa36.07■■■■□ 3.37
CPNE1-203ENST00000397442 CSB-PGBD3P0DP91 1061 aa36.07■■■■□ 3.36
CPNE1-203ENST00000397442 SLFN5Q08AF3 891 aa36.07■■■■□ 3.36
CPNE1-203ENST00000397442 MTHFSDQ2M296 383 aaKnown RBP36.07■■■■□ 3.36
CPNE1-203ENST00000397442 WDR17Q8IZU2 1322 aa36.06■■■■□ 3.36
CPNE1-203ENST00000397442 TRMT2AQ8IZ69 625 aaKnown RBP36.05■■■■□ 3.36
CPNE1-203ENST00000397442 HSPA1LP34931 641 aa36.03■■■■□ 3.36
CPNE1-203ENST00000397442 DUSP27Q5VZP5 1158 aa36.03■■■■□ 3.36
CPNE1-203ENST00000397442 E9PSI1 815 aa36■■■■□ 3.35
CPNE1-203ENST00000397442 BTG4Q9NY30 223 aa36■■■■□ 3.35
CPNE1-203ENST00000397442 NUTM2BA6NNL0 878 aaPredicted RBP36■■■■□ 3.35
CPNE1-203ENST00000397442 NUTM2EB1AL46 878 aaPredicted RBP36■■■■□ 3.35
CPNE1-203ENST00000397442 ADAMTS2O95450 1211 aa36■■■■□ 3.35
CPNE1-203ENST00000397442 NUTM2AQ8IVF1 878 aaPredicted RBP36■■■■□ 3.35
CPNE1-203ENST00000397442 GAS2L2Q8NHY3 880 aa36■■■■□ 3.35
CPNE1-203ENST00000397442 PLCH1Q4KWH8 1693 aa35.99■■■■□ 3.35
CPNE1-203ENST00000397442 LMOD3Q0VAK6 560 aa35.98■■■■□ 3.35
CPNE1-203ENST00000397442 STRN4Q9NRL3 753 aa35.97■■■■□ 3.35
CPNE1-203ENST00000397442 LARP1Q6PKG0 1096 aaKnown RBP35.96■■■■□ 3.35
CPNE1-203ENST00000397442 TOM1L2Q6ZVM7 507 aa35.95■■■■□ 3.35
CPNE1-203ENST00000397442 THUMPD2Q9BTF0 503 aaKnown RBP35.95■■■■□ 3.35
CPNE1-203ENST00000397442 IL16Q14005 1332 aa35.95■■■■□ 3.35
CPNE1-203ENST00000397442 MEGF6O75095 1541 aa35.94■■■■□ 3.34
CPNE1-203ENST00000397442 EVA1CP58658 441 aa35.94■■■■□ 3.34
CPNE1-203ENST00000397442 CARD10Q9BWT7 1032 aa35.93■■■■□ 3.34
CPNE1-203ENST00000397442 DCTN1Q14203 1278 aa35.92■■■■□ 3.34
CPNE1-203ENST00000397442 SPATA31A6Q5VVP1 1343 aa35.92■■■■□ 3.34
CPNE1-203ENST00000397442 RAPGEF4Q8WZA2 1011 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms