RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OVOS2Q6IE36 1432 aa22.93■■□□□ 1.26
TSPAN4-205ENST00000397406 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
TSPAN4-205ENST00000397406 USP19O94966 1318 aa22.92■■□□□ 1.26
TSPAN4-205ENST00000397406 ZC3H6P61129 1189 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 PRDM11Q9NQV5 511 aa22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-205ENST00000397406 MAP2P11137 1827 aaKnown RBP22.9■■□□□ 1.26
TSPAN4-205ENST00000397406 ABTB2Q8N961 1025 aa22.9■■□□□ 1.26
TSPAN4-205ENST00000397406 BRWD3Q6RI45 1802 aa22.89■■□□□ 1.25
TSPAN4-205ENST00000397406 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
TSPAN4-205ENST00000397406 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
TSPAN4-205ENST00000397406 FAM98CQ17RN3 349 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-205ENST00000397406 COG3Q96JB2 828 aa22.87■■□□□ 1.25
TSPAN4-205ENST00000397406 TNNT2P45379 298 aaPredicted RBP22.86■■□□□ 1.25
TSPAN4-205ENST00000397406 MRS2Q9HD23 443 aa22.86■■□□□ 1.25
TSPAN4-205ENST00000397406 CAMTA1Q9Y6Y1 1673 aa22.84■■□□□ 1.25
TSPAN4-205ENST00000397406 GCP02774 474 aa22.84■■□□□ 1.25
TSPAN4-205ENST00000397406 CPDO75976 1380 aa22.84■■□□□ 1.25
TSPAN4-205ENST00000397406 AATKQ6ZMQ8 1374 aa22.83■■□□□ 1.25
TSPAN4-205ENST00000397406 KRT27Q7Z3Y8 459 aa22.82■■□□□ 1.24
TSPAN4-205ENST00000397406 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
TSPAN4-205ENST00000397406 LMO7Q8WWI1 1683 aa22.82■■□□□ 1.24
TSPAN4-205ENST00000397406 NLRP6P59044 892 aa22.81■■□□□ 1.24
TSPAN4-205ENST00000397406 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
TSPAN4-205ENST00000397406 SMG6Q86US8 1419 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-205ENST00000397406 THSD7AQ9UPZ6 1657 aa22.8■■□□□ 1.24
TSPAN4-205ENST00000397406 SLIT3O75094 1523 aa22.79■■□□□ 1.24
TSPAN4-205ENST00000397406 FAM182BQ5T319 152 aa22.79■■□□□ 1.24
TSPAN4-205ENST00000397406 CCDC125Q86Z20 511 aa22.79■■□□□ 1.24
TSPAN4-205ENST00000397406 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
TSPAN4-205ENST00000397406 MTHFSP49914 203 aa22.78■■□□□ 1.24
TSPAN4-205ENST00000397406 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-205ENST00000397406 FBLN1P23142 703 aa22.77■■□□□ 1.24
TSPAN4-205ENST00000397406 DEFB132Q7Z7B7 95 aa22.77■■□□□ 1.24
TSPAN4-205ENST00000397406 NFAT5O94916 1531 aa22.77■■□□□ 1.24
TSPAN4-205ENST00000397406 LTN1O94822 1766 aa22.76■■□□□ 1.23
TSPAN4-205ENST00000397406 PEAK1Q9H792 1746 aa22.76■■□□□ 1.23
TSPAN4-205ENST00000397406 PNISRQ8TF01 805 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-205ENST00000397406 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
TSPAN4-205ENST00000397406 COL3A1P02461 1466 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-205ENST00000397406 A0A0G2JS52 829 aa22.74■■□□□ 1.23
TSPAN4-205ENST00000397406 MYT1Q01538 1121 aa22.74■■□□□ 1.23
TSPAN4-205ENST00000397406 COL5A2P05997 1499 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-205ENST00000397406 USP35Q9P2H5 1018 aa22.73■■□□□ 1.23
TSPAN4-205ENST00000397406 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
TSPAN4-205ENST00000397406 EMILIN1Q9Y6C2 1016 aa22.73■■□□□ 1.23
TSPAN4-205ENST00000397406 RRS1Q15050 365 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-205ENST00000397406 INSRP06213 1382 aa22.72■■□□□ 1.23
TSPAN4-205ENST00000397406 COL18A1P39060 1754 aa22.7■■□□□ 1.22
TSPAN4-205ENST00000397406 EVA1CP58658 441 aa22.7■■□□□ 1.22
TSPAN4-205ENST00000397406 BARGINQ6ZT62 677 aa22.7■■□□□ 1.22
TSPAN4-205ENST00000397406 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
TSPAN4-205ENST00000397406 CFAP53Q96M91 514 aa22.7■■□□□ 1.22
TSPAN4-205ENST00000397406 SOX12O15370 315 aa22.69■■□□□ 1.22
TSPAN4-205ENST00000397406 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
TSPAN4-205ENST00000397406 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
TSPAN4-205ENST00000397406 KCNH5Q8NCM2 988 aa22.68■■□□□ 1.22
TSPAN4-205ENST00000397406 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
TSPAN4-205ENST00000397406 ZBTB7CA1YPR0 619 aa22.67■■□□□ 1.22
TSPAN4-205ENST00000397406 TCP11L2Q8N4U5 519 aa22.66■■□□□ 1.22
TSPAN4-205ENST00000397406 KIF24Q5T7B8 1368 aa22.66■■□□□ 1.22
TSPAN4-205ENST00000397406 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-205ENST00000397406 FLT4P35916 1363 aa22.63■■□□□ 1.21
TSPAN4-205ENST00000397406 CRB1P82279 1406 aa22.63■■□□□ 1.21
TSPAN4-205ENST00000397406 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
TSPAN4-205ENST00000397406 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
TSPAN4-205ENST00000397406 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-205ENST00000397406 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-205ENST00000397406 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
TSPAN4-205ENST00000397406 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-205ENST00000397406 RGPD1P0DJD0 1748 aa22.6■■□□□ 1.21
TSPAN4-205ENST00000397406 RGPD5Q99666 1765 aa22.6■■□□□ 1.21
TSPAN4-205ENST00000397406 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-205ENST00000397406 HOXC9P31274 260 aa22.59■■□□□ 1.21
TSPAN4-205ENST00000397406 AMPHP49418 695 aa22.59■■□□□ 1.21
TSPAN4-205ENST00000397406 EN1Q05925 392 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-205ENST00000397406 WDR17Q8IZU2 1322 aa22.59■■□□□ 1.21
TSPAN4-205ENST00000397406 IL13P35225 146 aa22.58■■□□□ 1.21
TSPAN4-205ENST00000397406 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.21
TSPAN4-205ENST00000397406 TNS1Q9HBL0 1735 aaKnown RBP22.58■■□□□ 1.2
TSPAN4-205ENST00000397406 ABCC6O95255 1503 aa22.58■■□□□ 1.2
TSPAN4-205ENST00000397406 DISP2A7MBM2 1401 aa22.58■■□□□ 1.2
TSPAN4-205ENST00000397406 TRIM37O94972 964 aa22.57■■□□□ 1.2
TSPAN4-205ENST00000397406 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
TSPAN4-205ENST00000397406 IP6K1Q92551 441 aa22.57■■□□□ 1.2
TSPAN4-205ENST00000397406 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
TSPAN4-205ENST00000397406 BAG6P46379 1132 aa22.56■■□□□ 1.2
TSPAN4-205ENST00000397406 EIF4A2Q14240 407 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-205ENST00000397406 TOM1L2Q6ZVM7 507 aa22.56■■□□□ 1.2
TSPAN4-205ENST00000397406 PARP4Q9UKK3 1724 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-205ENST00000397406 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
TSPAN4-205ENST00000397406 CAMKK2Q96RR4 588 aa22.54■■□□□ 1.2
TSPAN4-205ENST00000397406 EZH2Q15910 746 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-205ENST00000397406 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
TSPAN4-205ENST00000397406 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
TSPAN4-205ENST00000397406 U2SURPO15042 1029 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-205ENST00000397406 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms