RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
LMCD1-202ENST00000397386 FCHSD2O94868 740 aa16.82■□□□□ 0.28
LMCD1-202ENST00000397386 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
LMCD1-202ENST00000397386 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
LMCD1-202ENST00000397386 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
LMCD1-202ENST00000397386 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
LMCD1-202ENST00000397386 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
LMCD1-202ENST00000397386 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
LMCD1-202ENST00000397386 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
LMCD1-202ENST00000397386 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
LMCD1-202ENST00000397386 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
LMCD1-202ENST00000397386 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
LMCD1-202ENST00000397386 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
LMCD1-202ENST00000397386 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.28
LMCD1-202ENST00000397386 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
LMCD1-202ENST00000397386 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.27
LMCD1-202ENST00000397386 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
LMCD1-202ENST00000397386 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
LMCD1-202ENST00000397386 KDRP35968 1356 aa16.76■□□□□ 0.27
LMCD1-202ENST00000397386 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
LMCD1-202ENST00000397386 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
LMCD1-202ENST00000397386 COL18A1P39060 1754 aa16.75■□□□□ 0.27
LMCD1-202ENST00000397386 APAF1O14727 1248 aa16.75■□□□□ 0.27
LMCD1-202ENST00000397386 NEFMP07197 916 aa16.75■□□□□ 0.27
LMCD1-202ENST00000397386 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
LMCD1-202ENST00000397386 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
LMCD1-202ENST00000397386 EYA1Q99502 592 aa16.74■□□□□ 0.27
LMCD1-202ENST00000397386 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
LMCD1-202ENST00000397386 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
LMCD1-202ENST00000397386 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
LMCD1-202ENST00000397386 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
LMCD1-202ENST00000397386 ERBB3P21860 1342 aa16.73■□□□□ 0.27
LMCD1-202ENST00000397386 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
LMCD1-202ENST00000397386 HMOX1P09601 288 aa16.72■□□□□ 0.27
LMCD1-202ENST00000397386 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
LMCD1-202ENST00000397386 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
LMCD1-202ENST00000397386 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
LMCD1-202ENST00000397386 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
LMCD1-202ENST00000397386 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
LMCD1-202ENST00000397386 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
LMCD1-202ENST00000397386 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
LMCD1-202ENST00000397386 LMO7Q8WWI1 1683 aa16.7■□□□□ 0.26
LMCD1-202ENST00000397386 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
LMCD1-202ENST00000397386 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
LMCD1-202ENST00000397386 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
LMCD1-202ENST00000397386 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
LMCD1-202ENST00000397386 JCADQ9P266 1359 aa16.69■□□□□ 0.26
LMCD1-202ENST00000397386 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
LMCD1-202ENST00000397386 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
LMCD1-202ENST00000397386 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
LMCD1-202ENST00000397386 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
LMCD1-202ENST00000397386 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
LMCD1-202ENST00000397386 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
LMCD1-202ENST00000397386 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
LMCD1-202ENST00000397386 PHACTR3Q96KR7 559 aa16.67■□□□□ 0.26
LMCD1-202ENST00000397386 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
LMCD1-202ENST00000397386 NFE2L2Q16236 605 aa16.66■□□□□ 0.26
LMCD1-202ENST00000397386 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
LMCD1-202ENST00000397386 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
LMCD1-202ENST00000397386 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
LMCD1-202ENST00000397386 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
LMCD1-202ENST00000397386 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
LMCD1-202ENST00000397386 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
LMCD1-202ENST00000397386 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
LMCD1-202ENST00000397386 RIPK4P57078 832 aa16.64■□□□□ 0.25
LMCD1-202ENST00000397386 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
LMCD1-202ENST00000397386 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
LMCD1-202ENST00000397386 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
LMCD1-202ENST00000397386 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
LMCD1-202ENST00000397386 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
LMCD1-202ENST00000397386 CSB-PGBD3P0DP91 1061 aa16.62■□□□□ 0.25
LMCD1-202ENST00000397386 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
LMCD1-202ENST00000397386 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
LMCD1-202ENST00000397386 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
LMCD1-202ENST00000397386 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
LMCD1-202ENST00000397386 HSPA1LP34931 641 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 IL16Q14005 1332 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 E9PSI1 815 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
LMCD1-202ENST00000397386 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
LMCD1-202ENST00000397386 EVA1CP58658 441 aa16.59■□□□□ 0.25
LMCD1-202ENST00000397386 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
LMCD1-202ENST00000397386 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
LMCD1-202ENST00000397386 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
LMCD1-202ENST00000397386 CARD10Q9BWT7 1032 aa16.59■□□□□ 0.25
LMCD1-202ENST00000397386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMCD1-202ENST00000397386 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
LMCD1-202ENST00000397386 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
LMCD1-202ENST00000397386 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
LMCD1-202ENST00000397386 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
LMCD1-202ENST00000397386 CRB1P82279 1406 aa16.58■□□□□ 0.24
LMCD1-202ENST00000397386 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
LMCD1-202ENST00000397386 FBXO41Q8TF61 875 aa16.57■□□□□ 0.24
LMCD1-202ENST00000397386 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
LMCD1-202ENST00000397386 PLCH1Q4KWH8 1693 aa16.57■□□□□ 0.24
LMCD1-202ENST00000397386 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
LMCD1-202ENST00000397386 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
LMCD1-202ENST00000397386 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms