RNA–Protein interactions for RNA: ENST00000396563.8

SP140L-202, Transcript of SP140 nuclear body protein like, humanhuman

TSL 1 (best) BASIC

Gene SP140L, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-202ENST00000396563 TRIM27P14373 513 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 DMTNQ08495 405 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
SP140L-202ENST00000396563 MED14O60244 1454 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 SSFA2P28290 1259 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
SP140L-202ENST00000396563 LRSAM1Q6UWE0 723 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 CDC45O75419 566 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 KIF20AO95235 890 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
SP140L-202ENST00000396563 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
SP140L-202ENST00000396563 KIAA2012Q0VF49 1180 aa13.16□□□□□ -0.3
SP140L-202ENST00000396563 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
SP140L-202ENST00000396563 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
SP140L-202ENST00000396563 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
SP140L-202ENST00000396563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.16□□□□□ -0.3
SP140L-202ENST00000396563 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.3
SP140L-202ENST00000396563 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
SP140L-202ENST00000396563 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
SP140L-202ENST00000396563 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
SP140L-202ENST00000396563 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
SP140L-202ENST00000396563 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
SP140L-202ENST00000396563 CAVIN1Q6NZI2 390 aaKnown RBP13.14□□□□□ -0.31
SP140L-202ENST00000396563 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
SP140L-202ENST00000396563 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
SP140L-202ENST00000396563 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
SP140L-202ENST00000396563 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
SP140L-202ENST00000396563 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
SP140L-202ENST00000396563 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
SP140L-202ENST00000396563 PHF14O94880 888 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
SP140L-202ENST00000396563 UVSSAQ2YD98 709 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
SP140L-202ENST00000396563 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
SP140L-202ENST00000396563 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SP140L-202ENST00000396563 KIF1BO60333 1816 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 ST18O60284 1047 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
SP140L-202ENST00000396563 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
SP140L-202ENST00000396563 ABCC1P33527 1531 aa13.12□□□□□ -0.31
SP140L-202ENST00000396563 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
SP140L-202ENST00000396563 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
SP140L-202ENST00000396563 MTHFSP49914 203 aa13.1□□□□□ -0.31
SP140L-202ENST00000396563 MCM2P49736 904 aa13.1□□□□□ -0.31
SP140L-202ENST00000396563 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
SP140L-202ENST00000396563 PLCH2O75038 1416 aa13.09□□□□□ -0.31
SP140L-202ENST00000396563 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
SP140L-202ENST00000396563 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
SP140L-202ENST00000396563 FANCAO15360 1455 aa13.09□□□□□ -0.31
SP140L-202ENST00000396563 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.31
SP140L-202ENST00000396563 TPM3P06753 285 aa13.08□□□□□ -0.32
SP140L-202ENST00000396563 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
SP140L-202ENST00000396563 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.32
SP140L-202ENST00000396563 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
SP140L-202ENST00000396563 ANKRD36BQ8N2N9 1353 aa13.08□□□□□ -0.32
SP140L-202ENST00000396563 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
SP140L-202ENST00000396563 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
SP140L-202ENST00000396563 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
SP140L-202ENST00000396563 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
SP140L-202ENST00000396563 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
SP140L-202ENST00000396563 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
SP140L-202ENST00000396563 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
SP140L-202ENST00000396563 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
SP140L-202ENST00000396563 ASXL2Q76L83 1435 aa13.07□□□□□ -0.32
SP140L-202ENST00000396563 APBB1O00213 710 aa13.06□□□□□ -0.32
SP140L-202ENST00000396563 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
SP140L-202ENST00000396563 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
SP140L-202ENST00000396563 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
SP140L-202ENST00000396563 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
SP140L-202ENST00000396563 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
SP140L-202ENST00000396563 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 ATAD2Q6PL18 1390 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 REC8O95072 547 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
SP140L-202ENST00000396563 CDC42BPGQ6DT37 1551 aa13.04□□□□□ -0.32
SP140L-202ENST00000396563 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
SP140L-202ENST00000396563 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
SP140L-202ENST00000396563 SPTLC3Q9NUV7 552 aa13.04□□□□□ -0.32
SP140L-202ENST00000396563 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
SP140L-202ENST00000396563 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
SP140L-202ENST00000396563 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
SP140L-202ENST00000396563 FEZ1Q99689 392 aa13.03□□□□□ -0.32
SP140L-202ENST00000396563 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms