RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
CCR9-203ENST00000395963 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
CCR9-203ENST00000395963 HOXC9P31274 260 aa11.76□□□□□ -0.53
CCR9-203ENST00000395963 AMPHP49418 695 aa11.76□□□□□ -0.53
CCR9-203ENST00000395963 NWD2Q9ULI1 1742 aa11.75□□□□□ -0.53
CCR9-203ENST00000395963 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
CCR9-203ENST00000395963 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
CCR9-203ENST00000395963 IL13P35225 146 aa11.75□□□□□ -0.53
CCR9-203ENST00000395963 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
CCR9-203ENST00000395963 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
CCR9-203ENST00000395963 KDRP35968 1356 aa11.74□□□□□ -0.53
CCR9-203ENST00000395963 FCHSD2O94868 740 aa11.74□□□□□ -0.53
CCR9-203ENST00000395963 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
CCR9-203ENST00000395963 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
CCR9-203ENST00000395963 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
CCR9-203ENST00000395963 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
CCR9-203ENST00000395963 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
CCR9-203ENST00000395963 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.72□□□□□ -0.53
CCR9-203ENST00000395963 KIAA0232Q92628 1395 aa11.72□□□□□ -0.53
CCR9-203ENST00000395963 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
CCR9-203ENST00000395963 CNGB1Q14028 1251 aaPredicted RBP11.71□□□□□ -0.53
CCR9-203ENST00000395963 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
CCR9-203ENST00000395963 NEFMP07197 916 aa11.71□□□□□ -0.53
CCR9-203ENST00000395963 ERBB3P21860 1342 aa11.71□□□□□ -0.54
CCR9-203ENST00000395963 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
CCR9-203ENST00000395963 PLCH1Q4KWH8 1693 aa11.7□□□□□ -0.54
CCR9-203ENST00000395963 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
CCR9-203ENST00000395963 NRAPQ86VF7 1730 aa11.7□□□□□ -0.54
CCR9-203ENST00000395963 PRDM11Q9NQV5 511 aa11.69□□□□□ -0.54
CCR9-203ENST00000395963 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
CCR9-203ENST00000395963 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
CCR9-203ENST00000395963 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
CCR9-203ENST00000395963 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
CCR9-203ENST00000395963 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCR9-203ENST00000395963 FAM9BQ8IZU0 186 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 SLIT2O94813 1529 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 ZBED9Q6R2W3 1325 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 WDR17Q8IZU2 1322 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
CCR9-203ENST00000395963 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
CCR9-203ENST00000395963 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
CCR9-203ENST00000395963 PARP4Q9UKK3 1724 aaKnown RBP11.67□□□□□ -0.54
CCR9-203ENST00000395963 MAPK8IP3Q9UPT6 1336 aa11.67□□□□□ -0.54
CCR9-203ENST00000395963 RGPD5Q99666 1765 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
CCR9-203ENST00000395963 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
CCR9-203ENST00000395963 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 CRB1P82279 1406 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 SOX12O15370 315 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 LMOD3Q0VAK6 560 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
CCR9-203ENST00000395963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCR9-203ENST00000395963 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
CCR9-203ENST00000395963 HSPA1LP34931 641 aa11.65□□□□□ -0.54
CCR9-203ENST00000395963 EYA1Q99502 592 aa11.65□□□□□ -0.54
CCR9-203ENST00000395963 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
CCR9-203ENST00000395963 OVOS2A0A0G2JMS6 1433 aa11.65□□□□□ -0.54
CCR9-203ENST00000395963 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.55
CCR9-203ENST00000395963 PKD1L3Q7Z443 1732 aa11.64□□□□□ -0.55
CCR9-203ENST00000395963 FBLN1P23142 703 aa11.64□□□□□ -0.55
CCR9-203ENST00000395963 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
CCR9-203ENST00000395963 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
CCR9-203ENST00000395963 CARD10Q9BWT7 1032 aa11.64□□□□□ -0.55
CCR9-203ENST00000395963 THRAP3Q9Y2W1 955 aaKnown RBP11.64□□□□□ -0.55
CCR9-203ENST00000395963 HTATSF1O43719 755 aaKnown RBP11.64□□□□□ -0.55
CCR9-203ENST00000395963 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
CCR9-203ENST00000395963 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
CCR9-203ENST00000395963 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
CCR9-203ENST00000395963 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
CCR9-203ENST00000395963 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
CCR9-203ENST00000395963 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
CCR9-203ENST00000395963 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
CCR9-203ENST00000395963 LRP6O75581 1613 aa11.62□□□□□ -0.55
CCR9-203ENST00000395963 PRKAR2BP31323 418 aa11.62□□□□□ -0.55
CCR9-203ENST00000395963 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCR9-203ENST00000395963 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 IL16Q14005 1332 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 RGPD2P0DJD1 1756 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 ADAMTS7Q9UKP4 1686 aa11.61□□□□□ -0.55
CCR9-203ENST00000395963 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 EVA1CP58658 441 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 CHRNA2Q15822 529 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
CCR9-203ENST00000395963 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
CCR9-203ENST00000395963 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
CCR9-203ENST00000395963 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
CCR9-203ENST00000395963 TMPOP42166 694 aaKnown RBP11.59□□□□□ -0.55
CCR9-203ENST00000395963 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
CCR9-203ENST00000395963 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
CCR9-203ENST00000395963 TATP17735 454 aaPredicted RBP11.59□□□□□ -0.55
CCR9-203ENST00000395963 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
CCR9-203ENST00000395963 APAF1O14727 1248 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms