RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 KCNQ2O43526 872 aa30.33■■■□□ 2.45
TRAF4-203ENST00000394925 PTF1AQ7RTS3 328 aa30.33■■■□□ 2.45
TRAF4-203ENST00000394925 TRPM1Q7Z4N2 1603 aa30.33■■■□□ 2.45
TRAF4-203ENST00000394925 CPSF1Q10570 1443 aaKnown RBP30.32■■■□□ 2.44
TRAF4-203ENST00000394925 ARHGEF25Q86VW2 580 aa30.32■■■□□ 2.44
TRAF4-203ENST00000394925 ZNF692Q9BU19 519 aaPredicted RBP30.32■■■□□ 2.44
TRAF4-203ENST00000394925 RGPD5Q99666 1765 aa30.31■■■□□ 2.44
TRAF4-203ENST00000394925 KCNH5Q8NCM2 988 aa30.31■■■□□ 2.44
TRAF4-203ENST00000394925 SIN3AQ96ST3 1273 aa30.31■■■□□ 2.44
TRAF4-203ENST00000394925 BCL11BQ9C0K0 894 aaPredicted RBP30.31■■■□□ 2.44
TRAF4-203ENST00000394925 WNK3Q9BYP7 1800 aa30.31■■■□□ 2.44
TRAF4-203ENST00000394925 MARCH10Q8NA82 808 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-203ENST00000394925 RGPD3A6NKT7 1758 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-203ENST00000394925 RGPD4Q7Z3J3 1758 aa30.3■■■□□ 2.44
TRAF4-203ENST00000394925 CSB-PGBD3P0DP91 1061 aa30.29■■■□□ 2.44
TRAF4-203ENST00000394925 CDCA7Q9BWT1 371 aaPredicted RBP30.29■■■□□ 2.44
TRAF4-203ENST00000394925 ROCK2O75116 1388 aaKnown RBP30.28■■■□□ 2.44
TRAF4-203ENST00000394925 AKAP12Q02952 1782 aa30.28■■■□□ 2.44
TRAF4-203ENST00000394925 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
TRAF4-203ENST00000394925 TTC21AQ8NDW8 1320 aa30.26■■■□□ 2.44
TRAF4-203ENST00000394925 NEUROD1Q13562 356 aa30.26■■■□□ 2.43
TRAF4-203ENST00000394925 CARD10Q9BWT7 1032 aa30.26■■■□□ 2.43
TRAF4-203ENST00000394925 YY1P25490 414 aa30.24■■■□□ 2.43
TRAF4-203ENST00000394925 PROM2Q8N271 834 aa30.23■■■□□ 2.43
TRAF4-203ENST00000394925 KTN1Q86UP2 1357 aaKnown RBP30.23■■■□□ 2.43
TRAF4-203ENST00000394925 BCL9O00512 1426 aa30.22■■■□□ 2.43
TRAF4-203ENST00000394925 EXOC5O00471 708 aa30.21■■■□□ 2.43
TRAF4-203ENST00000394925 NINLQ9Y2I6 1382 aa30.2■■■□□ 2.43
TRAF4-203ENST00000394925 NFAT5O94916 1531 aa30.2■■■□□ 2.42
TRAF4-203ENST00000394925 PDGFDQ9GZP0 370 aaPredicted RBP30.19■■■□□ 2.42
TRAF4-203ENST00000394925 CASZ1Q86V15 1759 aa30.18■■■□□ 2.42
TRAF4-203ENST00000394925 DCAF8L1A6NGE4 600 aa30.18■■■□□ 2.42
TRAF4-203ENST00000394925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.17■■■□□ 2.42
TRAF4-203ENST00000394925 CCDC7Q96M83 1385 aa30.16■■■□□ 2.42
TRAF4-203ENST00000394925 ZBTB7AO95365 584 aa30.15■■■□□ 2.42
TRAF4-203ENST00000394925 TXNRD1Q16881 649 aa30.15■■■□□ 2.42
TRAF4-203ENST00000394925 MON2Q7Z3U7 1717 aa30.14■■■□□ 2.42
TRAF4-203ENST00000394925 STK32BQ9NY57 414 aa30.12■■■□□ 2.41
TRAF4-203ENST00000394925 ABCC6O95255 1503 aa30.12■■■□□ 2.41
TRAF4-203ENST00000394925 TNS2Q63HR2 1409 aa30.11■■■□□ 2.41
TRAF4-203ENST00000394925 NME9Q86XW9 330 aa30.1■■■□□ 2.41
TRAF4-203ENST00000394925 USP31Q70CQ4 1352 aa30.1■■■□□ 2.41
TRAF4-203ENST00000394925 SLC15A2Q16348 729 aa30.09■■■□□ 2.41
TRAF4-203ENST00000394925 NLRP2Q9NX02 1062 aa30.09■■■□□ 2.41
TRAF4-203ENST00000394925 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
TRAF4-203ENST00000394925 TMC1Q8TDI8 760 aa30.08■■■□□ 2.41
TRAF4-203ENST00000394925 ACSBG1Q96GR2 724 aa30.08■■■□□ 2.41
TRAF4-203ENST00000394925 SBNO2Q9Y2G9 1366 aa30.07■■■□□ 2.4
TRAF4-203ENST00000394925 ERBB3P21860 1342 aa30.07■■■□□ 2.4
TRAF4-203ENST00000394925 PTGER2P43116 358 aa30.06■■■□□ 2.4
TRAF4-203ENST00000394925 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
TRAF4-203ENST00000394925 LTN1O94822 1766 aa30.05■■■□□ 2.4
TRAF4-203ENST00000394925 MYOM1P52179 1685 aa30.05■■■□□ 2.4
TRAF4-203ENST00000394925 CARD11Q9BXL7 1154 aa30.05■■■□□ 2.4
TRAF4-203ENST00000394925 NHSQ6T4R5 1651 aa30.04■■■□□ 2.4
TRAF4-203ENST00000394925 USP54Q70EL1 1684 aa30.04■■■□□ 2.4
TRAF4-203ENST00000394925 KAT6BQ8WYB5 2073 aa30.03■■■□□ 2.4
TRAF4-203ENST00000394925 IL2RBP14784 551 aa30.03■■■□□ 2.4
TRAF4-203ENST00000394925 HDGFL2Q7Z4V5 671 aaPredicted RBP30.03■■■□□ 2.4
TRAF4-203ENST00000394925 SLC12A5Q9H2X9 1139 aa30.03■■■□□ 2.4
TRAF4-203ENST00000394925 ANKRD24Q8TF21 1146 aa30.02■■■□□ 2.4
TRAF4-203ENST00000394925 MTFR1LQ9H019 292 aa29.98■■■□□ 2.39
TRAF4-203ENST00000394925 EDC4Q6P2E9 1401 aaKnown RBP29.97■■■□□ 2.39
TRAF4-203ENST00000394925 FHDC1Q9C0D6 1143 aaPredicted RBP29.96■■■□□ 2.39
TRAF4-203ENST00000394925 BTAF1O14981 1849 aa29.96■■■□□ 2.39
TRAF4-203ENST00000394925 SYT17Q9BSW7 474 aa29.95■■■□□ 2.39
TRAF4-203ENST00000394925 TERF2IPQ9NYB0 399 aa29.95■■■□□ 2.39
TRAF4-203ENST00000394925 A0A1W2PP64 1363 aa29.93■■■□□ 2.38
TRAF4-203ENST00000394925 SGIP1Q9BQI5 828 aa29.92■■■□□ 2.38
TRAF4-203ENST00000394925 PAPPAQ13219 1627 aa29.91■■■□□ 2.38
TRAF4-203ENST00000394925 UTRNP46939 3433 aa29.9■■■□□ 2.38
TRAF4-203ENST00000394925 LTV1Q96GA3 475 aaPredicted RBP29.9■■■□□ 2.38
TRAF4-203ENST00000394925 ZNF827Q17R98 1081 aa29.89■■■□□ 2.38
TRAF4-203ENST00000394925 IP6K1Q92551 441 aa29.89■■■□□ 2.38
TRAF4-203ENST00000394925 DDX54Q8TDD1 881 aaKnown RBP29.88■■■□□ 2.37
TRAF4-203ENST00000394925 LRRC4BQ9NT99 713 aa29.88■■■□□ 2.37
TRAF4-203ENST00000394925 PUS7Q96PZ0 661 aaKnown RBP29.87■■■□□ 2.37
TRAF4-203ENST00000394925 ARXQ96QS3 562 aa29.87■■■□□ 2.37
TRAF4-203ENST00000394925 TONSLQ96HA7 1378 aa29.86■■■□□ 2.37
TRAF4-203ENST00000394925 FAM208AQ9UK61 1670 aaKnown RBP29.82■■■□□ 2.36
TRAF4-203ENST00000394925 ZNF784Q8NCA9 323 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-203ENST00000394925 COG3Q96JB2 828 aa29.81■■■□□ 2.36
TRAF4-203ENST00000394925 FBLN1P23142 703 aa29.8■■■□□ 2.36
TRAF4-203ENST00000394925 AKT1S1Q96B36 256 aa29.8■■■□□ 2.36
TRAF4-203ENST00000394925 SYTL4Q96C24 671 aaPredicted RBP29.8■■■□□ 2.36
TRAF4-203ENST00000394925 MAP3K19Q56UN5 1328 aa29.79■■■□□ 2.36
TRAF4-203ENST00000394925 SLC27A3Q5K4L6 730 aa29.79■■■□□ 2.36
TRAF4-203ENST00000394925 CHD4Q14839 1912 aa29.79■■■□□ 2.36
TRAF4-203ENST00000394925 ST20-MTHFSA0A0A6YYL1 179 aa29.78■■■□□ 2.36
TRAF4-203ENST00000394925 HOXC9P31274 260 aa29.78■■■□□ 2.36
TRAF4-203ENST00000394925 AMPHP49418 695 aa29.78■■■□□ 2.36
TRAF4-203ENST00000394925 TESK2Q96S53 571 aa29.78■■■□□ 2.36
TRAF4-203ENST00000394925 PRIM1P49642 420 aaKnown RBP29.77■■■□□ 2.36
TRAF4-203ENST00000394925 KCNQ4P56696 695 aa29.77■■■□□ 2.36
TRAF4-203ENST00000394925 MAP3K5Q99683 1374 aa29.76■■■□□ 2.35
TRAF4-203ENST00000394925 RGPD2P0DJD1 1756 aa29.75■■■□□ 2.35
TRAF4-203ENST00000394925 SLC16A10Q8TF71 515 aa29.75■■■□□ 2.35
TRAF4-203ENST00000394925 QSER1Q2KHR3 1735 aa29.74■■■□□ 2.35
TRAF4-203ENST00000394925 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
TRAF4-203ENST00000394925 ZCRB1Q8TBF4 217 aaKnown RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms