RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 FKBP8Q14318 412 aa17.62■□□□□ 0.41
SRSF5-201ENST00000394366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
SRSF5-201ENST00000394366 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
SRSF5-201ENST00000394366 ATRNO75882 1429 aa17.62■□□□□ 0.41
SRSF5-201ENST00000394366 USP19O94966 1318 aa17.61■□□□□ 0.41
SRSF5-201ENST00000394366 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
SRSF5-201ENST00000394366 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
SRSF5-201ENST00000394366 ZC3H6P61129 1189 aaKnown RBP17.61■□□□□ 0.41
SRSF5-201ENST00000394366 GCP02774 474 aa17.6■□□□□ 0.41
SRSF5-201ENST00000394366 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
SRSF5-201ENST00000394366 COG3Q96JB2 828 aa17.6■□□□□ 0.41
SRSF5-201ENST00000394366 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
SRSF5-201ENST00000394366 CRYBG1Q9Y4K1 1723 aa17.6■□□□□ 0.41
SRSF5-201ENST00000394366 COL3A1P02461 1466 aaPredicted RBP17.59■□□□□ 0.41
SRSF5-201ENST00000394366 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
SRSF5-201ENST00000394366 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
SRSF5-201ENST00000394366 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
SRSF5-201ENST00000394366 RUNDC1Q96C34 613 aa17.58■□□□□ 0.41
SRSF5-201ENST00000394366 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.4
SRSF5-201ENST00000394366 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
SRSF5-201ENST00000394366 VPS72Q15906 364 aa17.58■□□□□ 0.4
SRSF5-201ENST00000394366 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
SRSF5-201ENST00000394366 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
SRSF5-201ENST00000394366 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
SRSF5-201ENST00000394366 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SRSF5-201ENST00000394366 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
SRSF5-201ENST00000394366 NME9Q86XW9 330 aa17.56■□□□□ 0.4
SRSF5-201ENST00000394366 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.55■□□□□ 0.4
SRSF5-201ENST00000394366 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 APAF1O14727 1248 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 RGS12O14924 1447 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 CPDO75976 1380 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
SRSF5-201ENST00000394366 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
SRSF5-201ENST00000394366 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
SRSF5-201ENST00000394366 MAP2P11137 1827 aaKnown RBP17.54■□□□□ 0.4
SRSF5-201ENST00000394366 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
SRSF5-201ENST00000394366 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
SRSF5-201ENST00000394366 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
SRSF5-201ENST00000394366 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
SRSF5-201ENST00000394366 SENP3-EIF4A1A0A087X0R7 540 aa17.53■□□□□ 0.4
SRSF5-201ENST00000394366 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
SRSF5-201ENST00000394366 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
SRSF5-201ENST00000394366 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■□□□□ 10.8
SRSF5-201ENST00000394366 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
SRSF5-201ENST00000394366 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
SRSF5-201ENST00000394366 SLIT3O75094 1523 aa17.53■□□□□ 0.4
SRSF5-201ENST00000394366 SOX12O15370 315 aa17.52■□□□□ 0.4
SRSF5-201ENST00000394366 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
SRSF5-201ENST00000394366 EVA1CP58658 441 aa17.51■□□□□ 0.39
SRSF5-201ENST00000394366 STRN4Q9NRL3 753 aa17.51■□□□□ 0.39
SRSF5-201ENST00000394366 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
SRSF5-201ENST00000394366 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
SRSF5-201ENST00000394366 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
SRSF5-201ENST00000394366 GLI3P10071 1580 aa17.49■□□□□ 0.39
SRSF5-201ENST00000394366 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
SRSF5-201ENST00000394366 E9PSI1 815 aa17.49■□□□□ 0.39
SRSF5-201ENST00000394366 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
SRSF5-201ENST00000394366 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
SRSF5-201ENST00000394366 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
SRSF5-201ENST00000394366 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
SRSF5-201ENST00000394366 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
SRSF5-201ENST00000394366 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
SRSF5-201ENST00000394366 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
SRSF5-201ENST00000394366 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
SRSF5-201ENST00000394366 CAMTA1Q9Y6Y1 1673 aa17.47■□□□□ 0.39
SRSF5-201ENST00000394366 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
SRSF5-201ENST00000394366 FCHSD2O94868 740 aa17.47■□□□□ 0.39
SRSF5-201ENST00000394366 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
SRSF5-201ENST00000394366 A0A0G2JS52 829 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 NEFMP07197 916 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 MYT1Q01538 1121 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
SRSF5-201ENST00000394366 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
SRSF5-201ENST00000394366 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
SRSF5-201ENST00000394366 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
SRSF5-201ENST00000394366 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
SRSF5-201ENST00000394366 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
SRSF5-201ENST00000394366 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
SRSF5-201ENST00000394366 LMO7Q8WWI1 1683 aa17.45■□□□□ 0.38
SRSF5-201ENST00000394366 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
SRSF5-201ENST00000394366 NFAT5O94916 1531 aa17.44■□□□□ 0.38
SRSF5-201ENST00000394366 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.38
SRSF5-201ENST00000394366 USP35Q9P2H5 1018 aa17.43■□□□□ 0.38
SRSF5-201ENST00000394366 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
SRSF5-201ENST00000394366 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
SRSF5-201ENST00000394366 RRP1P56182 461 aaKnown RBP17.43■□□□□ 0.38
SRSF5-201ENST00000394366 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
SRSF5-201ENST00000394366 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
SRSF5-201ENST00000394366 IL13P35225 146 aa17.42■□□□□ 0.38
SRSF5-201ENST00000394366 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
SRSF5-201ENST00000394366 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
SRSF5-201ENST00000394366 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.38
SRSF5-201ENST00000394366 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.38
SRSF5-201ENST00000394366 CRB1P82279 1406 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms