RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
CASP4-201ENST00000393150 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
CASP4-201ENST00000393150 NBPF8Q3BBV2 869 aa11.85□□□□□ -0.51
CASP4-201ENST00000393150 TPRNQ4KMQ1 711 aa11.85□□□□□ -0.51
CASP4-201ENST00000393150 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
CASP4-201ENST00000393150 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
CASP4-201ENST00000393150 NALCNQ8IZF0 1738 aa11.84□□□□□ -0.51
CASP4-201ENST00000393150 C7P10643 843 aa11.84□□□□□ -0.51
CASP4-201ENST00000393150 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
CASP4-201ENST00000393150 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
CASP4-201ENST00000393150 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
CASP4-201ENST00000393150 KIF3CO14782 793 aa11.83□□□□□ -0.52
CASP4-201ENST00000393150 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
CASP4-201ENST00000393150 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
CASP4-201ENST00000393150 STK26Q9P289 416 aa11.83□□□□□ -0.52
CASP4-201ENST00000393150 ARIH1Q9Y4X5 557 aaPredicted RBP11.83□□□□□ -0.52
CASP4-201ENST00000393150 NRXN3Q9Y4C0 1643 aa11.82□□□□□ -0.52
CASP4-201ENST00000393150 SLIT2O94813 1529 aa11.82□□□□□ -0.52
CASP4-201ENST00000393150 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CASP4-201ENST00000393150 DSG2Q14126 1118 aa11.82□□□□□ -0.52
CASP4-201ENST00000393150 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
CASP4-201ENST00000393150 SEC24BO95487 1268 aa11.81□□□□□ -0.52
CASP4-201ENST00000393150 TMEM92Q6UXU6 159 aa11.81□□□□□ -0.52
CASP4-201ENST00000393150 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
CASP4-201ENST00000393150 SPHKAPQ2M3C7 1700 aa11.81□□□□□ -0.52
CASP4-201ENST00000393150 ARHGEF10O15013 1369 aa11.8□□□□□ -0.52
CASP4-201ENST00000393150 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.8□□□□□ -0.52
CASP4-201ENST00000393150 MARF1Q9Y4F3 1742 aaKnown RBP11.8□□□□□ -0.52
CASP4-201ENST00000393150 PXDNQ92626 1479 aa11.79□□□□□ -0.52
CASP4-201ENST00000393150 FOXK1P85037 733 aa11.79□□□□□ -0.52
CASP4-201ENST00000393150 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
CASP4-201ENST00000393150 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
CASP4-201ENST00000393150 GLI3P10071 1580 aa11.78□□□□□ -0.52
CASP4-201ENST00000393150 NAIPQ13075 1403 aa11.78□□□□□ -0.52
CASP4-201ENST00000393150 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
CASP4-201ENST00000393150 NEXMIFQ5QGS0 1516 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 APBA3O96018 575 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 SPON1Q9HCB6 807 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
CASP4-201ENST00000393150 CDC42BPGQ6DT37 1551 aa11.76□□□□□ -0.53
CASP4-201ENST00000393150 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
CASP4-201ENST00000393150 PARD3Q8TEW0 1356 aa11.76□□□□□ -0.53
CASP4-201ENST00000393150 FAM83GA6ND36 823 aa11.76□□□□□ -0.53
CASP4-201ENST00000393150 KIF1BO60333 1816 aa11.76□□□□□ -0.53
CASP4-201ENST00000393150 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
CASP4-201ENST00000393150 SEMA3EO15041 775 aa11.75□□□□□ -0.53
CASP4-201ENST00000393150 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
CASP4-201ENST00000393150 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
CASP4-201ENST00000393150 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
CASP4-201ENST00000393150 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
CASP4-201ENST00000393150 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
CASP4-201ENST00000393150 G3V3G9 751 aa11.74□□□□□ -0.53
CASP4-201ENST00000393150 TRIM37O94972 964 aa11.74□□□□□ -0.53
CASP4-201ENST00000393150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
CASP4-201ENST00000393150 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
CASP4-201ENST00000393150 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
CASP4-201ENST00000393150 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
CASP4-201ENST00000393150 EVA1CP58658 441 aa11.72□□□□□ -0.53
CASP4-201ENST00000393150 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
CASP4-201ENST00000393150 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
CASP4-201ENST00000393150 NWD2Q9ULI1 1742 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 KIF1AQ12756 1690 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 KCNQ2O43526 872 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 RGL3Q3MIN7 710 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 PRDM11Q9NQV5 511 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 POGKQ9P215 609 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 DISP2A7MBM2 1401 aa11.71□□□□□ -0.53
CASP4-201ENST00000393150 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.54
CASP4-201ENST00000393150 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 ANKRD30BQ9BXX2 1392 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 CLTCL1P53675 1640 aa11.7□□□□□ -0.54
CASP4-201ENST00000393150 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
CASP4-201ENST00000393150 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
CASP4-201ENST00000393150 POTEMA6NI47 508 aa11.68□□□□□ -0.54
CASP4-201ENST00000393150 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
CASP4-201ENST00000393150 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
CASP4-201ENST00000393150 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
CASP4-201ENST00000393150 DPYSL4O14531 572 aa11.67□□□□□ -0.54
CASP4-201ENST00000393150 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
CASP4-201ENST00000393150 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
CASP4-201ENST00000393150 SAFB2Q14151 953 aaKnown RBP eCLIP11.66□□□□□ -0.54
CASP4-201ENST00000393150 USP35Q9P2H5 1018 aa11.66□□□□□ -0.54
CASP4-201ENST00000393150 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
CASP4-201ENST00000393150 TECPR2O15040 1411 aa11.66□□□□□ -0.54
CASP4-201ENST00000393150 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
CASP4-201ENST00000393150 RRBP1Q9P2E9 1410 aaKnown RBP11.65□□□□□ -0.54
CASP4-201ENST00000393150 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
CASP4-201ENST00000393150 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
CASP4-201ENST00000393150 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
CASP4-201ENST00000393150 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
CASP4-201ENST00000393150 NRXN1Q9ULB1 1477 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms