RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PPP1R9BQ96SB3 815 aa14.38□□□□□ -0.11
PDCD4-202ENST00000393104 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
PDCD4-202ENST00000393104 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
PDCD4-202ENST00000393104 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
PDCD4-202ENST00000393104 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
PDCD4-202ENST00000393104 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
PDCD4-202ENST00000393104 LRRC7Q96NW7 1537 aa14.38□□□□□ -0.11
PDCD4-202ENST00000393104 TRAK1Q9UPV9 953 aa14.37□□□□□ -0.11
PDCD4-202ENST00000393104 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
PDCD4-202ENST00000393104 RRP9O43818 475 aaKnown RBP14.37□□□□□ -0.11
PDCD4-202ENST00000393104 DLG5Q8TDM6 1919 aa14.36□□□□□ -0.11
PDCD4-202ENST00000393104 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
PDCD4-202ENST00000393104 A0A1W2PP64 1363 aa14.36□□□□□ -0.11
PDCD4-202ENST00000393104 CYP2E1P05181 493 aaPredicted RBP14.36□□□□□ -0.11
PDCD4-202ENST00000393104 RIPK4P57078 832 aa14.36□□□□□ -0.11
PDCD4-202ENST00000393104 UPF2Q9HAU5 1272 aaKnown RBP14.36□□□□□ -0.11
PDCD4-202ENST00000393104 MON2Q7Z3U7 1717 aa14.36□□□□□ -0.11
PDCD4-202ENST00000393104 ZBTB7BO15156 539 aaPredicted RBP14.35□□□□□ -0.11
PDCD4-202ENST00000393104 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
PDCD4-202ENST00000393104 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
PDCD4-202ENST00000393104 KIF20BQ96Q89 1820 aa14.35□□□□□ -0.11
PDCD4-202ENST00000393104 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
PDCD4-202ENST00000393104 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
PDCD4-202ENST00000393104 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
PDCD4-202ENST00000393104 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
PDCD4-202ENST00000393104 SSFA2P28290 1259 aa14.34□□□□□ -0.11
PDCD4-202ENST00000393104 PKNOX2Q96KN3 472 aa14.34□□□□□ -0.11
PDCD4-202ENST00000393104 ISY1Q9ULR0 285 aaKnown RBP14.34□□□□□ -0.11
PDCD4-202ENST00000393104 CHD1LQ86WJ1 897 aa14.34□□□□□ -0.11
PDCD4-202ENST00000393104 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
PDCD4-202ENST00000393104 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.33□□□□□ -0.11
PDCD4-202ENST00000393104 NSD2O96028 1365 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 ATP7BP35670 1465 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 DDX19BQ9UMR2 479 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
PDCD4-202ENST00000393104 PKP1Q13835 747 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 TBC1D9Q6ZT07 1266 aa14.33□□□□□ -0.12
PDCD4-202ENST00000393104 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
PDCD4-202ENST00000393104 IL16Q14005 1332 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 USP54Q70EL1 1684 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 ATAD2Q6PL18 1390 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 THEMISQ8N1K5 641 aaPredicted RBP14.32□□□□□ -0.12
PDCD4-202ENST00000393104 EVC2Q86UK5 1308 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 NRKQ7Z2Y5 1582 aa14.32□□□□□ -0.12
PDCD4-202ENST00000393104 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
PDCD4-202ENST00000393104 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDCD4-202ENST00000393104 METP08581 1390 aa14.31□□□□□ -0.12
PDCD4-202ENST00000393104 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
PDCD4-202ENST00000393104 ZDHHC9Q9Y397 364 aa14.3□□□□□ -0.12
PDCD4-202ENST00000393104 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
PDCD4-202ENST00000393104 HSCBQ8IWL3 235 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 FTSJ3Q8IY81 847 aaKnown RBP14.29□□□□□ -0.12
PDCD4-202ENST00000393104 PDLIM2Q96JY6 352 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 FYB1O15117 783 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 RGS12O14924 1447 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
PDCD4-202ENST00000393104 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
PDCD4-202ENST00000393104 VSIG10Q8N0Z9 540 aa14.28□□□□□ -0.12
PDCD4-202ENST00000393104 CHAMP1Q96JM3 812 aa14.28□□□□□ -0.12
PDCD4-202ENST00000393104 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
PDCD4-202ENST00000393104 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
PDCD4-202ENST00000393104 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
PDCD4-202ENST00000393104 HSP90AA1P07900 732 aaKnown RBP14.28□□□□□ -0.12
PDCD4-202ENST00000393104 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.12
PDCD4-202ENST00000393104 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.12
PDCD4-202ENST00000393104 K7ELQ4 463 aaPredicted RBP14.27□□□□□ -0.13
PDCD4-202ENST00000393104 ABCC4O15439 1325 aa14.27□□□□□ -0.13
PDCD4-202ENST00000393104 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
PDCD4-202ENST00000393104 VAMP4O75379 141 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 MRPL50Q8N5N7 158 aaKnown RBP14.26□□□□□ -0.13
PDCD4-202ENST00000393104 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 OFD1O75665 1012 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 LTKP29376 864 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 ZNF445P59923 1031 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
PDCD4-202ENST00000393104 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 FBLN1P23142 703 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 CEBPAP49715 358 aaPredicted RBP14.26□□□□□ -0.13
PDCD4-202ENST00000393104 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 GPT2Q8TD30 523 aa14.26□□□□□ -0.13
PDCD4-202ENST00000393104 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
PDCD4-202ENST00000393104 RBSNQ9H1K0 784 aa14.25□□□□□ -0.13
PDCD4-202ENST00000393104 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
PDCD4-202ENST00000393104 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
PDCD4-202ENST00000393104 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
PDCD4-202ENST00000393104 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
PDCD4-202ENST00000393104 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
PDCD4-202ENST00000393104 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
PDCD4-202ENST00000393104 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
PDCD4-202ENST00000393104 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
PDCD4-202ENST00000393104 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
PDCD4-202ENST00000393104 ZSCAN23Q3MJ62 389 aa14.22□□□□□ -0.13
PDCD4-202ENST00000393104 TXNDC2Q86VQ3 553 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms