RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
SUMO1-203ENST00000392246 RGPD5Q99666 1765 aa20.25■□□□□ 0.83
SUMO1-203ENST00000392246 CAMTA1Q9Y6Y1 1673 aa20.25■□□□□ 0.83
SUMO1-203ENST00000392246 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
SUMO1-203ENST00000392246 AXIN2Q9Y2T1 843 aa20.25■□□□□ 0.83
SUMO1-203ENST00000392246 KIF24Q5T7B8 1368 aa20.24■□□□□ 0.83
SUMO1-203ENST00000392246 EVA1CP58658 441 aa20.24■□□□□ 0.83
SUMO1-203ENST00000392246 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.24■□□□□ 0.83
SUMO1-203ENST00000392246 RTL1A6NKG5 1358 aa20.23■□□□□ 0.83
SUMO1-203ENST00000392246 HOXC9P31274 260 aa20.23■□□□□ 0.83
SUMO1-203ENST00000392246 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
SUMO1-203ENST00000392246 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
SUMO1-203ENST00000392246 NRAPQ86VF7 1730 aa20.23■□□□□ 0.83
SUMO1-203ENST00000392246 PPM1GO15355 546 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-203ENST00000392246 BLMP54132 1417 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-203ENST00000392246 FLT4P35916 1363 aa20.22■□□□□ 0.83
SUMO1-203ENST00000392246 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
SUMO1-203ENST00000392246 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-203ENST00000392246 QTRT2Q9H974 415 aaKnown RBP20.21■□□□□ 0.83
SUMO1-203ENST00000392246 PEAK1Q9H792 1746 aa20.21■□□□□ 0.83
SUMO1-203ENST00000392246 COL5A2P05997 1499 aaPredicted RBP20.21■□□□□ 0.83
SUMO1-203ENST00000392246 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
SUMO1-203ENST00000392246 RALBP1Q15311 655 aa20.2■□□□□ 0.82
SUMO1-203ENST00000392246 VPS72Q15906 364 aa20.19■□□□□ 0.82
SUMO1-203ENST00000392246 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
SUMO1-203ENST00000392246 ATRNO75882 1429 aa20.18■□□□□ 0.82
SUMO1-203ENST00000392246 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
SUMO1-203ENST00000392246 INSRP06213 1382 aa20.18■□□□□ 0.82
SUMO1-203ENST00000392246 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
SUMO1-203ENST00000392246 MTHFSP49914 203 aa20.17■□□□□ 0.82
SUMO1-203ENST00000392246 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
SUMO1-203ENST00000392246 ERBB3P21860 1342 aa20.17■□□□□ 0.82
SUMO1-203ENST00000392246 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
SUMO1-203ENST00000392246 LARP1Q6PKG0 1096 aaKnown RBP20.17■□□□□ 0.82
SUMO1-203ENST00000392246 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
SUMO1-203ENST00000392246 PPP2R1AP30153 589 aa20.16■□□□□ 0.82
SUMO1-203ENST00000392246 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
SUMO1-203ENST00000392246 LTV1Q96GA3 475 aaPredicted RBP20.16■□□□□ 0.82
SUMO1-203ENST00000392246 GJD4Q96KN9 370 aaPredicted RBP20.16■□□□□ 0.82
SUMO1-203ENST00000392246 TOM1L2Q6ZVM7 507 aa20.15■□□□□ 0.82
SUMO1-203ENST00000392246 CDK12Q9NYV4 1490 aaPredicted RBP20.15■□□□□ 0.82
SUMO1-203ENST00000392246 SPATA31A5Q5VU36 1347 aa20.15■□□□□ 0.82
SUMO1-203ENST00000392246 SPATA31A7Q8IWB4 1347 aa20.15■□□□□ 0.82
SUMO1-203ENST00000392246 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
SUMO1-203ENST00000392246 CRB1P82279 1406 aa20.14■□□□□ 0.81
SUMO1-203ENST00000392246 RBM6P78332 1123 aaKnown RBP20.13■□□□□ 0.81
SUMO1-203ENST00000392246 RXRBP28702 533 aa20.12■□□□□ 0.81
SUMO1-203ENST00000392246 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
SUMO1-203ENST00000392246 SPATA31A1Q5TZJ5 1347 aa20.12■□□□□ 0.81
SUMO1-203ENST00000392246 CARD10Q9BWT7 1032 aa20.12■□□□□ 0.81
SUMO1-203ENST00000392246 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
SUMO1-203ENST00000392246 ANP32CO43423 234 aa20.11■□□□□ 0.81
SUMO1-203ENST00000392246 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
SUMO1-203ENST00000392246 THRAP3Q9Y2W1 955 aaKnown RBP20.1■□□□□ 0.81
SUMO1-203ENST00000392246 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
SUMO1-203ENST00000392246 GLI3P10071 1580 aa20.09■□□□□ 0.81
SUMO1-203ENST00000392246 EIF4A2Q14240 407 aaKnown RBP20.09■□□□□ 0.81
SUMO1-203ENST00000392246 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
SUMO1-203ENST00000392246 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
SUMO1-203ENST00000392246 RGPD2P0DJD1 1756 aa20.09■□□□□ 0.81
SUMO1-203ENST00000392246 DIAPH1O60610 1272 aaKnown RBP20.07■□□□□ 0.8
SUMO1-203ENST00000392246 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
SUMO1-203ENST00000392246 BARGINQ6ZT62 677 aa20.07■□□□□ 0.8
SUMO1-203ENST00000392246 NBPF4Q96M43 638 aa20.07■□□□□ 0.8
SUMO1-203ENST00000392246 IL13P35225 146 aa20.06■□□□□ 0.8
SUMO1-203ENST00000392246 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
SUMO1-203ENST00000392246 ONECUT3O60422 494 aaPredicted RBP20.05■□□□□ 0.8
SUMO1-203ENST00000392246 EYA1Q99502 592 aa20.05■□□□□ 0.8
SUMO1-203ENST00000392246 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
SUMO1-203ENST00000392246 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
SUMO1-203ENST00000392246 CDCA7Q9BWT1 371 aaPredicted RBP20.02■□□□□ 0.8
SUMO1-203ENST00000392246 IGSF1Q8N6C5 1336 aa20.02■□□□□ 0.79
SUMO1-203ENST00000392246 USHBP1Q8N6Y0 703 aa20.02■□□□□ 0.79
SUMO1-203ENST00000392246 A0A0G2JS52 829 aa20.01■□□□□ 0.79
SUMO1-203ENST00000392246 MYT1Q01538 1121 aa20.01■□□□□ 0.79
SUMO1-203ENST00000392246 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
SUMO1-203ENST00000392246 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
SUMO1-203ENST00000392246 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
SUMO1-203ENST00000392246 IL2RBP14784 551 aa20■□□□□ 0.79
SUMO1-203ENST00000392246 NCAPD2Q15021 1401 aa20■□□□□ 0.79
SUMO1-203ENST00000392246 RGPD1P0DJD0 1748 aa19.99■□□□□ 0.79
SUMO1-203ENST00000392246 THSD7AQ9UPZ6 1657 aa19.99■□□□□ 0.79
SUMO1-203ENST00000392246 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
SUMO1-203ENST00000392246 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
SUMO1-203ENST00000392246 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
SUMO1-203ENST00000392246 RGS12O14924 1447 aa19.98■□□□□ 0.79
SUMO1-203ENST00000392246 PARP4Q9UKK3 1724 aaKnown RBP19.97■□□□□ 0.79
SUMO1-203ENST00000392246 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
SUMO1-203ENST00000392246 TATP17735 454 aaPredicted RBP19.96■□□□□ 0.79
SUMO1-203ENST00000392246 EXOC5O00471 708 aa19.95■□□□□ 0.78
SUMO1-203ENST00000392246 DDB1Q16531 1140 aa19.95■□□□□ 0.78
SUMO1-203ENST00000392246 KDRP35968 1356 aa19.95■□□□□ 0.78
SUMO1-203ENST00000392246 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
SUMO1-203ENST00000392246 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
SUMO1-203ENST00000392246 MEGF6O75095 1541 aa19.94■□□□□ 0.78
SUMO1-203ENST00000392246 HMOX1P09601 288 aa19.93■□□□□ 0.78
SUMO1-203ENST00000392246 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
SUMO1-203ENST00000392246 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
SUMO1-203ENST00000392246 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
SUMO1-203ENST00000392246 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms