RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
ERCC2-202ENST00000391942 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
ERCC2-202ENST00000391942 IP6K1Q92551 441 aa22.88■■□□□ 1.25
ERCC2-202ENST00000391942 RGPD5Q99666 1765 aa22.88■■□□□ 1.25
ERCC2-202ENST00000391942 FAM83GA6ND36 823 aa22.87■■□□□ 1.25
ERCC2-202ENST00000391942 AXIN2Q9Y2T1 843 aa22.87■■□□□ 1.25
ERCC2-202ENST00000391942 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
ERCC2-202ENST00000391942 LRP6O75581 1613 aa22.87■■□□□ 1.25
ERCC2-202ENST00000391942 COL18A1P39060 1754 aa22.87■■□□□ 1.25
ERCC2-202ENST00000391942 LTV1Q96GA3 475 aaPredicted RBP22.86■■□□□ 1.25
ERCC2-202ENST00000391942 KIF24Q5T7B8 1368 aa22.86■■□□□ 1.25
ERCC2-202ENST00000391942 DIAPH1O60610 1272 aaKnown RBP22.84■■□□□ 1.25
ERCC2-202ENST00000391942 INSRP06213 1382 aa22.84■■□□□ 1.25
ERCC2-202ENST00000391942 LMO7Q8WWI1 1683 aa22.83■■□□□ 1.25
ERCC2-202ENST00000391942 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.25
ERCC2-202ENST00000391942 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
ERCC2-202ENST00000391942 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
ERCC2-202ENST00000391942 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
ERCC2-202ENST00000391942 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
ERCC2-202ENST00000391942 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
ERCC2-202ENST00000391942 C8orf37Q96NL8 207 aa22.81■■□□□ 1.24
ERCC2-202ENST00000391942 ABCC6O95255 1503 aa22.81■■□□□ 1.24
ERCC2-202ENST00000391942 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
ERCC2-202ENST00000391942 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
ERCC2-202ENST00000391942 IL13P35225 146 aa22.8■■□□□ 1.24
ERCC2-202ENST00000391942 BTG4Q9NY30 223 aa22.79■■□□□ 1.24
ERCC2-202ENST00000391942 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
ERCC2-202ENST00000391942 PNISRQ8TF01 805 aaKnown RBP22.79■■□□□ 1.24
ERCC2-202ENST00000391942 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
ERCC2-202ENST00000391942 STRN4Q9NRL3 753 aa22.78■■□□□ 1.24
ERCC2-202ENST00000391942 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
ERCC2-202ENST00000391942 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
ERCC2-202ENST00000391942 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
ERCC2-202ENST00000391942 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
ERCC2-202ENST00000391942 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
ERCC2-202ENST00000391942 ERBB3P21860 1342 aa22.77■■□□□ 1.24
ERCC2-202ENST00000391942 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
ERCC2-202ENST00000391942 EVA1CP58658 441 aa22.75■■□□□ 1.23
ERCC2-202ENST00000391942 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.23
ERCC2-202ENST00000391942 USHBP1Q8N6Y0 703 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 EYA1Q99502 592 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 ADAMTS8Q9UP79 889 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 RGPD1P0DJD0 1748 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 HMOX1P09601 288 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 NBPF6Q5VWK0 638 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 NBPF4Q96M43 638 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
ERCC2-202ENST00000391942 SLIT2O94813 1529 aa22.72■■□□□ 1.23
ERCC2-202ENST00000391942 NRAPQ86VF7 1730 aa22.72■■□□□ 1.23
ERCC2-202ENST00000391942 LARP1Q6PKG0 1096 aaKnown RBP22.72■■□□□ 1.23
ERCC2-202ENST00000391942 ILDR1Q86SU0 546 aaPredicted RBP22.72■■□□□ 1.23
ERCC2-202ENST00000391942 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
ERCC2-202ENST00000391942 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
ERCC2-202ENST00000391942 FAM208AQ9UK61 1670 aaKnown RBP22.7■■□□□ 1.22
ERCC2-202ENST00000391942 TOM1L2Q6ZVM7 507 aa22.7■■□□□ 1.22
ERCC2-202ENST00000391942 AEBP1Q8IUX7 1158 aa22.7■■□□□ 1.22
ERCC2-202ENST00000391942 IGSF1Q8N6C5 1336 aa22.69■■□□□ 1.22
ERCC2-202ENST00000391942 SULT6B1Q6IMI4 303 aa22.69■■□□□ 1.22
ERCC2-202ENST00000391942 AFF2P51816 1311 aa22.67■■□□□ 1.22
ERCC2-202ENST00000391942 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
ERCC2-202ENST00000391942 FNBP4Q8N3X1 1017 aaPredicted RBP22.67■■□□□ 1.22
ERCC2-202ENST00000391942 BCL9LQ86UU0 1499 aa22.67■■□□□ 1.22
ERCC2-202ENST00000391942 UNC5CLQ8IV45 518 aa22.66■■□□□ 1.22
ERCC2-202ENST00000391942 USP35Q9P2H5 1018 aa22.66■■□□□ 1.22
ERCC2-202ENST00000391942 USP21Q9UK80 565 aa22.66■■□□□ 1.22
ERCC2-202ENST00000391942 CRB1P82279 1406 aa22.65■■□□□ 1.22
ERCC2-202ENST00000391942 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
ERCC2-202ENST00000391942 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.21
ERCC2-202ENST00000391942 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
ERCC2-202ENST00000391942 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.21
ERCC2-202ENST00000391942 FCHSD2O94868 740 aa22.62■■□□□ 1.21
ERCC2-202ENST00000391942 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
ERCC2-202ENST00000391942 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.62■■□□□ 1.21
ERCC2-202ENST00000391942 KDRP35968 1356 aa22.61■■□□□ 1.21
ERCC2-202ENST00000391942 NCAPD2Q15021 1401 aa22.61■■□□□ 1.21
ERCC2-202ENST00000391942 VPS72Q15906 364 aa22.59■■□□□ 1.21
ERCC2-202ENST00000391942 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
ERCC2-202ENST00000391942 PLEKHF1Q96S99 279 aa22.59■■□□□ 1.21
ERCC2-202ENST00000391942 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
ERCC2-202ENST00000391942 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.2
ERCC2-202ENST00000391942 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.2
ERCC2-202ENST00000391942 SPATA31A5Q5VU36 1347 aa22.57■■□□□ 1.2
ERCC2-202ENST00000391942 SPATA31A7Q8IWB4 1347 aa22.57■■□□□ 1.2
ERCC2-202ENST00000391942 RAPGEF4Q8WZA2 1011 aa22.57■■□□□ 1.2
ERCC2-202ENST00000391942 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
ERCC2-202ENST00000391942 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
ERCC2-202ENST00000391942 MEGF6O75095 1541 aa22.56■■□□□ 1.2
ERCC2-202ENST00000391942 NEFMP07197 916 aa22.55■■□□□ 1.2
ERCC2-202ENST00000391942 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
ERCC2-202ENST00000391942 TATP17735 454 aaPredicted RBP22.54■■□□□ 1.2
ERCC2-202ENST00000391942 ATRNO75882 1429 aa22.54■■□□□ 1.2
ERCC2-202ENST00000391942 APAF1O14727 1248 aa22.54■■□□□ 1.2
ERCC2-202ENST00000391942 IL2RBP14784 551 aa22.54■■□□□ 1.2
ERCC2-202ENST00000391942 QTRT2Q9H974 415 aaKnown RBP22.54■■□□□ 1.2
ERCC2-202ENST00000391942 TRPC5Q9UL62 973 aaPredicted RBP22.54■■□□□ 1.2
ERCC2-202ENST00000391942 RRP7AQ9Y3A4 280 aaKnown RBP22.54■■□□□ 1.2
ERCC2-202ENST00000391942 WNK3Q9BYP7 1800 aa22.53■■□□□ 1.2
ERCC2-202ENST00000391942 PARP4Q9UKK3 1724 aaKnown RBP22.52■■□□□ 1.2
ERCC2-202ENST00000391942 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
ERCC2-202ENST00000391942 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms