RNA–Protein interactions for RNA: ENST00000391762.5

NDUFA3-202, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 5 BASIC

Gene NDUFA3, Length 435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-202ENST00000391762 CRB1P82279 1406 aa12.96□□□□□ -0.34
NDUFA3-202ENST00000391762 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
NDUFA3-202ENST00000391762 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
NDUFA3-202ENST00000391762 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
NDUFA3-202ENST00000391762 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
NDUFA3-202ENST00000391762 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
NDUFA3-202ENST00000391762 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
NDUFA3-202ENST00000391762 NME9Q86XW9 330 aa12.94□□□□□ -0.34
NDUFA3-202ENST00000391762 CCDC9Q9Y3X0 531 aaKnown RBP12.94□□□□□ -0.34
NDUFA3-202ENST00000391762 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
NDUFA3-202ENST00000391762 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
NDUFA3-202ENST00000391762 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
NDUFA3-202ENST00000391762 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
NDUFA3-202ENST00000391762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
NDUFA3-202ENST00000391762 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
NDUFA3-202ENST00000391762 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
NDUFA3-202ENST00000391762 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
NDUFA3-202ENST00000391762 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
NDUFA3-202ENST00000391762 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 LRP5O75197 1615 aa12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
NDUFA3-202ENST00000391762 SOX12O15370 315 aa12.87□□□□□ -0.35
NDUFA3-202ENST00000391762 DEFB132Q7Z7B7 95 aa12.87□□□□□ -0.35
NDUFA3-202ENST00000391762 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
NDUFA3-202ENST00000391762 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
NDUFA3-202ENST00000391762 ERBB3P21860 1342 aa12.87□□□□□ -0.35
NDUFA3-202ENST00000391762 A0A0G2JS52 829 aa12.86□□□□□ -0.35
NDUFA3-202ENST00000391762 TMF1P82094 1093 aa12.86□□□□□ -0.35
NDUFA3-202ENST00000391762 MYT1Q01538 1121 aa12.86□□□□□ -0.35
NDUFA3-202ENST00000391762 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-202ENST00000391762 BTAF1O14981 1849 aa12.85□□□□□ -0.35
NDUFA3-202ENST00000391762 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
NDUFA3-202ENST00000391762 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
NDUFA3-202ENST00000391762 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
NDUFA3-202ENST00000391762 DOT1LQ8TEK3 1739 aa12.85□□□□□ -0.35
NDUFA3-202ENST00000391762 BCL9O00512 1426 aa12.84□□□□□ -0.35
NDUFA3-202ENST00000391762 PKD1L3Q7Z443 1732 aa12.84□□□□□ -0.35
NDUFA3-202ENST00000391762 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
NDUFA3-202ENST00000391762 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
NDUFA3-202ENST00000391762 EVA1CP58658 441 aa12.83□□□□□ -0.36
NDUFA3-202ENST00000391762 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
NDUFA3-202ENST00000391762 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 FYB1O15117 783 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
NDUFA3-202ENST00000391762 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
NDUFA3-202ENST00000391762 FBLN1P23142 703 aa12.81□□□□□ -0.36
NDUFA3-202ENST00000391762 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
NDUFA3-202ENST00000391762 MEGF6O75095 1541 aa12.81□□□□□ -0.36
NDUFA3-202ENST00000391762 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
NDUFA3-202ENST00000391762 HSPA5P11021 654 aaKnown RBP12.8□□□□□ -0.36
NDUFA3-202ENST00000391762 TUBGCP6Q96RT7 1819 aa12.79□□□□□ -0.36
NDUFA3-202ENST00000391762 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
NDUFA3-202ENST00000391762 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
NDUFA3-202ENST00000391762 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
NDUFA3-202ENST00000391762 LY75O60449 1722 aa12.79□□□□□ -0.36
NDUFA3-202ENST00000391762 C11orf95C9JLR9 678 aaPredicted RBP12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 TRIM37O94972 964 aa12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 IP6K1Q92551 441 aa12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
NDUFA3-202ENST00000391762 HOXC9P31274 260 aa12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 COG3Q96JB2 828 aa12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 CAMKK2Q96RR4 588 aa12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
NDUFA3-202ENST00000391762 ITGB4P16144 1822 aa12.76□□□□□ -0.37
NDUFA3-202ENST00000391762 BAG6P46379 1132 aa12.76□□□□□ -0.37
NDUFA3-202ENST00000391762 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
NDUFA3-202ENST00000391762 DDB1Q16531 1140 aa12.76□□□□□ -0.37
NDUFA3-202ENST00000391762 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 QSER1Q2KHR3 1735 aa12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
NDUFA3-202ENST00000391762 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
NDUFA3-202ENST00000391762 INSRP06213 1382 aa12.74□□□□□ -0.37
NDUFA3-202ENST00000391762 FLT4P35916 1363 aa12.74□□□□□ -0.37
NDUFA3-202ENST00000391762 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
NDUFA3-202ENST00000391762 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
NDUFA3-202ENST00000391762 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
NDUFA3-202ENST00000391762 VIRMAQ69YN4 1812 aaKnown RBP12.73□□□□□ -0.37
NDUFA3-202ENST00000391762 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
NDUFA3-202ENST00000391762 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
NDUFA3-202ENST00000391762 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
NDUFA3-202ENST00000391762 NSD2O96028 1365 aa12.71□□□□□ -0.37
NDUFA3-202ENST00000391762 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
NDUFA3-202ENST00000391762 IL2RBP14784 551 aa12.71□□□□□ -0.37
NDUFA3-202ENST00000391762 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
NDUFA3-202ENST00000391762 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-202ENST00000391762 APBA3O96018 575 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms