RNA–Protein interactions for RNA: ENST00000390601.3

IGHV3-11-201, Transcript of immunoglobulin heavy variable 3-11 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGHV3-11, Length 473 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-11-201ENST00000390601 CPSF1Q10570 1443 aaKnown RBP17.86■□□□□ 0.45
IGHV3-11-201ENST00000390601 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
IGHV3-11-201ENST00000390601 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
IGHV3-11-201ENST00000390601 AXIN2Q9Y2T1 843 aa17.84■□□□□ 0.45
IGHV3-11-201ENST00000390601 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
IGHV3-11-201ENST00000390601 PLSCR1O15162 318 aa17.83■□□□□ 0.44
IGHV3-11-201ENST00000390601 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
IGHV3-11-201ENST00000390601 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
IGHV3-11-201ENST00000390601 SOX12O15370 315 aa17.82■□□□□ 0.44
IGHV3-11-201ENST00000390601 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
IGHV3-11-201ENST00000390601 PUS7Q96PZ0 661 aaKnown RBP17.82■□□□□ 0.44
IGHV3-11-201ENST00000390601 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
IGHV3-11-201ENST00000390601 EXOC5O00471 708 aa17.81■□□□□ 0.44
IGHV3-11-201ENST00000390601 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
IGHV3-11-201ENST00000390601 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
IGHV3-11-201ENST00000390601 TMC1Q8TDI8 760 aa17.8■□□□□ 0.44
IGHV3-11-201ENST00000390601 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
IGHV3-11-201ENST00000390601 COL18A1P39060 1754 aa17.8■□□□□ 0.44
IGHV3-11-201ENST00000390601 BCL9O00512 1426 aa17.8■□□□□ 0.44
IGHV3-11-201ENST00000390601 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
IGHV3-11-201ENST00000390601 ABCC6O95255 1503 aa17.79■□□□□ 0.44
IGHV3-11-201ENST00000390601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
IGHV3-11-201ENST00000390601 RREB1Q92766 1687 aa17.78■□□□□ 0.44
IGHV3-11-201ENST00000390601 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
IGHV3-11-201ENST00000390601 SPON1Q9HCB6 807 aa17.77■□□□□ 0.44
IGHV3-11-201ENST00000390601 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
IGHV3-11-201ENST00000390601 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
IGHV3-11-201ENST00000390601 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
IGHV3-11-201ENST00000390601 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
IGHV3-11-201ENST00000390601 NFAT5O94916 1531 aa17.75■□□□□ 0.43
IGHV3-11-201ENST00000390601 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
IGHV3-11-201ENST00000390601 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
IGHV3-11-201ENST00000390601 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
IGHV3-11-201ENST00000390601 KCNQ2O43526 872 aa17.74■□□□□ 0.43
IGHV3-11-201ENST00000390601 NME9Q86XW9 330 aa17.74■□□□□ 0.43
IGHV3-11-201ENST00000390601 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
IGHV3-11-201ENST00000390601 MON2Q7Z3U7 1717 aa17.73■□□□□ 0.43
IGHV3-11-201ENST00000390601 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
IGHV3-11-201ENST00000390601 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-11-201ENST00000390601 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
IGHV3-11-201ENST00000390601 ERBB3P21860 1342 aa17.72■□□□□ 0.43
IGHV3-11-201ENST00000390601 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.43
IGHV3-11-201ENST00000390601 IL2RBP14784 551 aa17.71■□□□□ 0.43
IGHV3-11-201ENST00000390601 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
IGHV3-11-201ENST00000390601 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
IGHV3-11-201ENST00000390601 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
IGHV3-11-201ENST00000390601 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
IGHV3-11-201ENST00000390601 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
IGHV3-11-201ENST00000390601 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
IGHV3-11-201ENST00000390601 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
IGHV3-11-201ENST00000390601 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
IGHV3-11-201ENST00000390601 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
IGHV3-11-201ENST00000390601 PROM2Q8N271 834 aa17.68■□□□□ 0.42
IGHV3-11-201ENST00000390601 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
IGHV3-11-201ENST00000390601 PTF1AQ7RTS3 328 aa17.67■□□□□ 0.42
IGHV3-11-201ENST00000390601 IP6K1Q92551 441 aa17.67■□□□□ 0.42
IGHV3-11-201ENST00000390601 COG3Q96JB2 828 aa17.67■□□□□ 0.42
IGHV3-11-201ENST00000390601 TESK2Q96S53 571 aa17.66■□□□□ 0.42
IGHV3-11-201ENST00000390601 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
IGHV3-11-201ENST00000390601 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
IGHV3-11-201ENST00000390601 TMF1P82094 1093 aa17.63■□□□□ 0.41
IGHV3-11-201ENST00000390601 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-11-201ENST00000390601 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
IGHV3-11-201ENST00000390601 LTN1O94822 1766 aa17.63■□□□□ 0.41
IGHV3-11-201ENST00000390601 AMPHP49418 695 aa17.62■□□□□ 0.41
IGHV3-11-201ENST00000390601 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
IGHV3-11-201ENST00000390601 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
IGHV3-11-201ENST00000390601 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
IGHV3-11-201ENST00000390601 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
IGHV3-11-201ENST00000390601 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
IGHV3-11-201ENST00000390601 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
IGHV3-11-201ENST00000390601 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
IGHV3-11-201ENST00000390601 YY1P25490 414 aa17.58■□□□□ 0.4
IGHV3-11-201ENST00000390601 HOXC9P31274 260 aa17.58■□□□□ 0.4
IGHV3-11-201ENST00000390601 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
IGHV3-11-201ENST00000390601 SLC27A3Q5K4L6 730 aa17.57■□□□□ 0.4
IGHV3-11-201ENST00000390601 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
IGHV3-11-201ENST00000390601 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
IGHV3-11-201ENST00000390601 FAM208AQ9UK61 1670 aaKnown RBP17.56■□□□□ 0.4
IGHV3-11-201ENST00000390601 PDGFDQ9GZP0 370 aaPredicted RBP17.56■□□□□ 0.4
IGHV3-11-201ENST00000390601 RTL1A6NKG5 1358 aa17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 USP47Q96K76 1375 aa17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 PTGER2P43116 358 aa17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
IGHV3-11-201ENST00000390601 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
IGHV3-11-201ENST00000390601 FYB1O15117 783 aa17.54■□□□□ 0.4
IGHV3-11-201ENST00000390601 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
IGHV3-11-201ENST00000390601 SLC16A10Q8TF71 515 aa17.52■□□□□ 0.4
IGHV3-11-201ENST00000390601 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-11-201ENST00000390601 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
IGHV3-11-201ENST00000390601 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
IGHV3-11-201ENST00000390601 KIF24Q5T7B8 1368 aa17.51■□□□□ 0.39
IGHV3-11-201ENST00000390601 BTAF1O14981 1849 aa17.5■□□□□ 0.39
IGHV3-11-201ENST00000390601 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
IGHV3-11-201ENST00000390601 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
IGHV3-11-201ENST00000390601 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
IGHV3-11-201ENST00000390601 FBLN1P23142 703 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms