RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
TRAV38-1-201ENST00000390464 SBF2Q86WG5 1849 aa10.12□□□□□ -0.79
TRAV38-1-201ENST00000390464 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
TRAV38-1-201ENST00000390464 GCP02774 474 aa10.11□□□□□ -0.79
TRAV38-1-201ENST00000390464 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
TRAV38-1-201ENST00000390464 SBNO2Q9Y2G9 1366 aa10.11□□□□□ -0.79
TRAV38-1-201ENST00000390464 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
TRAV38-1-201ENST00000390464 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 CRB1P82279 1406 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 FAM208AQ9UK61 1670 aaKnown RBP10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 DEFB132Q7Z7B7 95 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 TCP11L2Q8N4U5 519 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 THRAP3Q9Y2W1 955 aaKnown RBP10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 ABCC6O95255 1503 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 COL18A1P39060 1754 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 LRP5O75197 1615 aa10.1□□□□□ -0.79
TRAV38-1-201ENST00000390464 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 RGPD3A6NKT7 1758 aaPredicted RBP10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 RGPD4Q7Z3J3 1758 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 C11orf95C9JLR9 678 aaPredicted RBP10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 SOX12O15370 315 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 CSB-PGBD3P0DP91 1061 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 KIF20BQ96Q89 1820 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 RREB1Q92766 1687 aa10.09□□□□□ -0.79
TRAV38-1-201ENST00000390464 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
TRAV38-1-201ENST00000390464 TOM1L2Q6ZVM7 507 aa10.08□□□□□ -0.8
TRAV38-1-201ENST00000390464 TERF2IPQ9NYB0 399 aa10.08□□□□□ -0.8
TRAV38-1-201ENST00000390464 AATKQ6ZMQ8 1374 aa10.08□□□□□ -0.8
TRAV38-1-201ENST00000390464 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 OVOS2A0A0J9YW53 1432 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 OVOS2Q6IE36 1432 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
TRAV38-1-201ENST00000390464 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
TRAV38-1-201ENST00000390464 NINLQ9Y2I6 1382 aa10.06□□□□□ -0.8
TRAV38-1-201ENST00000390464 NFAT5O94916 1531 aa10.06□□□□□ -0.8
TRAV38-1-201ENST00000390464 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
TRAV38-1-201ENST00000390464 TRIM37O94972 964 aa10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 EDC4Q6P2E9 1401 aaKnown RBP10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 WDR17Q8IZU2 1322 aa10.05□□□□□ -0.8
TRAV38-1-201ENST00000390464 APBA3O96018 575 aa10.04□□□□□ -0.8
TRAV38-1-201ENST00000390464 POLA2Q14181 598 aa10.04□□□□□ -0.8
TRAV38-1-201ENST00000390464 DDB1Q16531 1140 aa10.04□□□□□ -0.8
TRAV38-1-201ENST00000390464 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
TRAV38-1-201ENST00000390464 PSDA5PKW4 1024 aaPredicted RBP10.03□□□□□ -0.8
TRAV38-1-201ENST00000390464 CCDC7Q96M83 1385 aa10.02□□□□□ -0.8
TRAV38-1-201ENST00000390464 NBPF14Q5TI25 921 aa10.02□□□□□ -0.81
TRAV38-1-201ENST00000390464 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 TMF1P82094 1093 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 ARHGEF25Q86VW2 580 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 USP47Q96K76 1375 aa10.01□□□□□ -0.81
TRAV38-1-201ENST00000390464 CD163L1Q9NR16 1453 aa10□□□□□ -0.81
TRAV38-1-201ENST00000390464 R3HDM1Q15032 1099 aaKnown RBP10□□□□□ -0.81
TRAV38-1-201ENST00000390464 EZH2Q15910 746 aaKnown RBP10□□□□□ -0.81
TRAV38-1-201ENST00000390464 NME9Q86XW9 330 aa10□□□□□ -0.81
TRAV38-1-201ENST00000390464 BTAF1O14981 1849 aa10□□□□□ -0.81
TRAV38-1-201ENST00000390464 TNS2Q63HR2 1409 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 ST20-MTHFSA0A0A6YYL1 179 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 COG3Q96JB2 828 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 CARD10Q9BWT7 1032 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 NLRP2Q9NX02 1062 aa9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 SMG6Q86US8 1419 aaKnown RBP9.99□□□□□ -0.81
TRAV38-1-201ENST00000390464 EXOC5O00471 708 aa9.98□□□□□ -0.81
TRAV38-1-201ENST00000390464 MYOM1P52179 1685 aa9.98□□□□□ -0.81
TRAV38-1-201ENST00000390464 DOT1LQ8TEK3 1739 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 ANKRD26Q9UPS8 1709 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 PCGF6Q9BYE7 350 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 MAP2P11137 1827 aaKnown RBP9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 ERBB3P21860 1342 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 CLSPNQ9HAW4 1339 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
TRAV38-1-201ENST00000390464 IL2RBP14784 551 aa9.96□□□□□ -0.82
TRAV38-1-201ENST00000390464 AMPHP49418 695 aa9.96□□□□□ -0.82
TRAV38-1-201ENST00000390464 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
TRAV38-1-201ENST00000390464 PPP1R1BQ9UD71 204 aaPredicted RBP9.96□□□□□ -0.82
TRAV38-1-201ENST00000390464 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
TRAV38-1-201ENST00000390464 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
TRAV38-1-201ENST00000390464 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
TRAV38-1-201ENST00000390464 BCL9O00512 1426 aa9.94□□□□□ -0.82
TRAV38-1-201ENST00000390464 RTL1A6NKG5 1358 aa9.94□□□□□ -0.82
TRAV38-1-201ENST00000390464 LTV1Q96GA3 475 aaPredicted RBP9.94□□□□□ -0.82
TRAV38-1-201ENST00000390464 TESK2Q96S53 571 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms