RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 EXOC5O00471 708 aa12.8□□□□□ -0.36
TRAV20-201ENST00000390448 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
TRAV20-201ENST00000390448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAV20-201ENST00000390448 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
TRAV20-201ENST00000390448 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
TRAV20-201ENST00000390448 PLSCR1O15162 318 aa12.78□□□□□ -0.36
TRAV20-201ENST00000390448 KCNQ2O43526 872 aa12.78□□□□□ -0.36
TRAV20-201ENST00000390448 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
TRAV20-201ENST00000390448 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
TRAV20-201ENST00000390448 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
TRAV20-201ENST00000390448 SLIT3O75094 1523 aa12.78□□□□□ -0.36
TRAV20-201ENST00000390448 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
TRAV20-201ENST00000390448 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
TRAV20-201ENST00000390448 NLRP2Q9NX02 1062 aa12.76□□□□□ -0.37
TRAV20-201ENST00000390448 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
TRAV20-201ENST00000390448 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
TRAV20-201ENST00000390448 PIK3C2AO00443 1686 aa12.74□□□□□ -0.37
TRAV20-201ENST00000390448 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
TRAV20-201ENST00000390448 PTF1AQ7RTS3 328 aa12.74□□□□□ -0.37
TRAV20-201ENST00000390448 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
TRAV20-201ENST00000390448 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
TRAV20-201ENST00000390448 YY1P25490 414 aa12.73□□□□□ -0.37
TRAV20-201ENST00000390448 NME9Q86XW9 330 aa12.73□□□□□ -0.37
TRAV20-201ENST00000390448 RREB1Q92766 1687 aa12.73□□□□□ -0.37
TRAV20-201ENST00000390448 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
TRAV20-201ENST00000390448 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
TRAV20-201ENST00000390448 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
TRAV20-201ENST00000390448 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
TRAV20-201ENST00000390448 LRRC37A3O60309 1634 aa12.71□□□□□ -0.37
TRAV20-201ENST00000390448 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
TRAV20-201ENST00000390448 IL2RBP14784 551 aa12.71□□□□□ -0.37
TRAV20-201ENST00000390448 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.37
TRAV20-201ENST00000390448 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
TRAV20-201ENST00000390448 PROM2Q8N271 834 aa12.7□□□□□ -0.38
TRAV20-201ENST00000390448 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
TRAV20-201ENST00000390448 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
TRAV20-201ENST00000390448 COL18A1P39060 1754 aa12.7□□□□□ -0.38
TRAV20-201ENST00000390448 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
TRAV20-201ENST00000390448 BCL9O00512 1426 aa12.69□□□□□ -0.38
TRAV20-201ENST00000390448 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
TRAV20-201ENST00000390448 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
TRAV20-201ENST00000390448 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
TRAV20-201ENST00000390448 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
TRAV20-201ENST00000390448 ERBB3P21860 1342 aa12.68□□□□□ -0.38
TRAV20-201ENST00000390448 SLC15A2Q16348 729 aa12.68□□□□□ -0.38
TRAV20-201ENST00000390448 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
TRAV20-201ENST00000390448 AKAP12Q02952 1782 aa12.68□□□□□ -0.38
TRAV20-201ENST00000390448 NFAT5O94916 1531 aa12.67□□□□□ -0.38
TRAV20-201ENST00000390448 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
TRAV20-201ENST00000390448 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
TRAV20-201ENST00000390448 COG3Q96JB2 828 aa12.67□□□□□ -0.38
TRAV20-201ENST00000390448 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
TRAV20-201ENST00000390448 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
TRAV20-201ENST00000390448 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
TRAV20-201ENST00000390448 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
TRAV20-201ENST00000390448 AMPHP49418 695 aa12.65□□□□□ -0.38
TRAV20-201ENST00000390448 IP6K1Q92551 441 aa12.65□□□□□ -0.38
TRAV20-201ENST00000390448 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
TRAV20-201ENST00000390448 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
TRAV20-201ENST00000390448 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
TRAV20-201ENST00000390448 ABCC6O95255 1503 aa12.65□□□□□ -0.38
TRAV20-201ENST00000390448 RGPD3A6NKT7 1758 aaPredicted RBP12.65□□□□□ -0.38
TRAV20-201ENST00000390448 RGPD4Q7Z3J3 1758 aa12.65□□□□□ -0.38
TRAV20-201ENST00000390448 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
TRAV20-201ENST00000390448 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
TRAV20-201ENST00000390448 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
TRAV20-201ENST00000390448 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
TRAV20-201ENST00000390448 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
TRAV20-201ENST00000390448 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
TRAV20-201ENST00000390448 PTGER2P43116 358 aa12.62□□□□□ -0.39
TRAV20-201ENST00000390448 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
TRAV20-201ENST00000390448 ARXQ96QS3 562 aa12.61□□□□□ -0.39
TRAV20-201ENST00000390448 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
TRAV20-201ENST00000390448 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
TRAV20-201ENST00000390448 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
TRAV20-201ENST00000390448 LTN1O94822 1766 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 POLD1P28340 1107 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 HOXC9P31274 260 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
TRAV20-201ENST00000390448 TMF1P82094 1093 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
TRAV20-201ENST00000390448 TESK2Q96S53 571 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
TRAV20-201ENST00000390448 UTRNP46939 3433 aa12.58□□□□□ -0.4
TRAV20-201ENST00000390448 FBLN1P23142 703 aa12.58□□□□□ -0.4
TRAV20-201ENST00000390448 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
TRAV20-201ENST00000390448 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
TRAV20-201ENST00000390448 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 MSH5O43196 834 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
TRAV20-201ENST00000390448 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
TRAV20-201ENST00000390448 GPR162Q16538 588 aa12.56□□□□□ -0.4
TRAV20-201ENST00000390448 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
TRAV20-201ENST00000390448 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
TRAV20-201ENST00000390448 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
TRAV20-201ENST00000390448 MYOM1P52179 1685 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms