RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
TRAV13-2-201ENST00000390439 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
TRAV13-2-201ENST00000390439 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
TRAV13-2-201ENST00000390439 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
TRAV13-2-201ENST00000390439 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
TRAV13-2-201ENST00000390439 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
TRAV13-2-201ENST00000390439 TTC21AQ8NDW8 1320 aa13.93□□□□□ -0.18
TRAV13-2-201ENST00000390439 BCL9O00512 1426 aa13.93□□□□□ -0.18
TRAV13-2-201ENST00000390439 SOX12O15370 315 aa13.93□□□□□ -0.18
TRAV13-2-201ENST00000390439 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
TRAV13-2-201ENST00000390439 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 SLIT3O75094 1523 aa13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 TXNRD1Q16881 649 aa13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 PTF1AQ7RTS3 328 aa13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 PROM2Q8N271 834 aa13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 ATF5Q9Y2D1 282 aaPredicted RBP13.92□□□□□ -0.18
TRAV13-2-201ENST00000390439 CPSF1Q10570 1443 aaKnown RBP13.91□□□□□ -0.18
TRAV13-2-201ENST00000390439 SLC15A2Q16348 729 aa13.91□□□□□ -0.18
TRAV13-2-201ENST00000390439 CCDC7Q96M83 1385 aa13.91□□□□□ -0.18
TRAV13-2-201ENST00000390439 MTFR1LQ9H019 292 aa13.9□□□□□ -0.18
TRAV13-2-201ENST00000390439 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
TRAV13-2-201ENST00000390439 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
TRAV13-2-201ENST00000390439 PTGER2P43116 358 aa13.89□□□□□ -0.19
TRAV13-2-201ENST00000390439 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
TRAV13-2-201ENST00000390439 PEAK1Q9H792 1746 aa13.89□□□□□ -0.19
TRAV13-2-201ENST00000390439 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
TRAV13-2-201ENST00000390439 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
TRAV13-2-201ENST00000390439 KTN1Q86UP2 1357 aaKnown RBP13.87□□□□□ -0.19
TRAV13-2-201ENST00000390439 SYT17Q9BSW7 474 aa13.87□□□□□ -0.19
TRAV13-2-201ENST00000390439 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
TRAV13-2-201ENST00000390439 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
TRAV13-2-201ENST00000390439 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
TRAV13-2-201ENST00000390439 QRICH2Q9H0J4 1663 aa13.86□□□□□ -0.19
TRAV13-2-201ENST00000390439 SBF2Q86WG5 1849 aa13.85□□□□□ -0.19
TRAV13-2-201ENST00000390439 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
TRAV13-2-201ENST00000390439 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
TRAV13-2-201ENST00000390439 ARXQ96QS3 562 aa13.85□□□□□ -0.19
TRAV13-2-201ENST00000390439 COL18A1P39060 1754 aa13.85□□□□□ -0.19
TRAV13-2-201ENST00000390439 IL2RBP14784 551 aa13.84□□□□□ -0.19
TRAV13-2-201ENST00000390439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAV13-2-201ENST00000390439 PIK3C2AO00443 1686 aa13.84□□□□□ -0.19
TRAV13-2-201ENST00000390439 TNS2Q63HR2 1409 aa13.83□□□□□ -0.2
TRAV13-2-201ENST00000390439 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
TRAV13-2-201ENST00000390439 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
TRAV13-2-201ENST00000390439 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
TRAV13-2-201ENST00000390439 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
TRAV13-2-201ENST00000390439 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
TRAV13-2-201ENST00000390439 ERBB3P21860 1342 aa13.82□□□□□ -0.2
TRAV13-2-201ENST00000390439 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
TRAV13-2-201ENST00000390439 ABCC6O95255 1503 aa13.81□□□□□ -0.2
TRAV13-2-201ENST00000390439 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
TRAV13-2-201ENST00000390439 SGIP1Q9BQI5 828 aa13.81□□□□□ -0.2
TRAV13-2-201ENST00000390439 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
TRAV13-2-201ENST00000390439 POLD1P28340 1107 aa13.8□□□□□ -0.2
TRAV13-2-201ENST00000390439 GPR162Q16538 588 aa13.8□□□□□ -0.2
TRAV13-2-201ENST00000390439 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
TRAV13-2-201ENST00000390439 SLC27A3Q5K4L6 730 aa13.79□□□□□ -0.2
TRAV13-2-201ENST00000390439 NME9Q86XW9 330 aa13.79□□□□□ -0.2
TRAV13-2-201ENST00000390439 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
TRAV13-2-201ENST00000390439 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
TRAV13-2-201ENST00000390439 NFAT5O94916 1531 aa13.79□□□□□ -0.2
TRAV13-2-201ENST00000390439 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
TRAV13-2-201ENST00000390439 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
TRAV13-2-201ENST00000390439 MYOM1P52179 1685 aa13.78□□□□□ -0.2
TRAV13-2-201ENST00000390439 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
TRAV13-2-201ENST00000390439 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
TRAV13-2-201ENST00000390439 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
TRAV13-2-201ENST00000390439 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
TRAV13-2-201ENST00000390439 IP6K1Q92551 441 aa13.75□□□□□ -0.21
TRAV13-2-201ENST00000390439 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
TRAV13-2-201ENST00000390439 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
TRAV13-2-201ENST00000390439 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
TRAV13-2-201ENST00000390439 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
TRAV13-2-201ENST00000390439 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
TRAV13-2-201ENST00000390439 MSH5O43196 834 aa13.73□□□□□ -0.21
TRAV13-2-201ENST00000390439 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
TRAV13-2-201ENST00000390439 AMPHP49418 695 aa13.72□□□□□ -0.21
TRAV13-2-201ENST00000390439 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
TRAV13-2-201ENST00000390439 COG3Q96JB2 828 aa13.72□□□□□ -0.21
TRAV13-2-201ENST00000390439 CHD4Q14839 1912 aa13.71□□□□□ -0.21
TRAV13-2-201ENST00000390439 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
TRAV13-2-201ENST00000390439 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.21
TRAV13-2-201ENST00000390439 UTRNP46939 3433 aa13.7□□□□□ -0.22
TRAV13-2-201ENST00000390439 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
TRAV13-2-201ENST00000390439 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
TRAV13-2-201ENST00000390439 CCNL1Q9UK58 526 aaPredicted RBP13.69□□□□□ -0.22
TRAV13-2-201ENST00000390439 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
TRAV13-2-201ENST00000390439 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
TRAV13-2-201ENST00000390439 BTAF1O14981 1849 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms