RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
TRBV27-201ENST00000390399 EP400Q96L91 3159 aa12.49□□□□□ -0.41
TRBV27-201ENST00000390399 CRB1P82279 1406 aa12.48□□□□□ -0.41
TRBV27-201ENST00000390399 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRBV27-201ENST00000390399 LTN1O94822 1766 aa12.48□□□□□ -0.41
TRBV27-201ENST00000390399 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
TRBV27-201ENST00000390399 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
TRBV27-201ENST00000390399 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
TRBV27-201ENST00000390399 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
TRBV27-201ENST00000390399 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
TRBV27-201ENST00000390399 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
TRBV27-201ENST00000390399 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
TRBV27-201ENST00000390399 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
TRBV27-201ENST00000390399 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.41
TRBV27-201ENST00000390399 TOM1L2Q6ZVM7 507 aa12.45□□□□□ -0.42
TRBV27-201ENST00000390399 COG3Q96JB2 828 aa12.45□□□□□ -0.42
TRBV27-201ENST00000390399 KIF20BQ96Q89 1820 aa12.45□□□□□ -0.42
TRBV27-201ENST00000390399 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
TRBV27-201ENST00000390399 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
TRBV27-201ENST00000390399 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
TRBV27-201ENST00000390399 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
TRBV27-201ENST00000390399 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
TRBV27-201ENST00000390399 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
TRBV27-201ENST00000390399 LRRC37A3O60309 1634 aa12.43□□□□□ -0.42
TRBV27-201ENST00000390399 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
TRBV27-201ENST00000390399 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
TRBV27-201ENST00000390399 ERBB3P21860 1342 aa12.41□□□□□ -0.42
TRBV27-201ENST00000390399 FYB1O15117 783 aa12.41□□□□□ -0.42
TRBV27-201ENST00000390399 PDE3BQ13370 1112 aa12.41□□□□□ -0.42
TRBV27-201ENST00000390399 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
TRBV27-201ENST00000390399 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
TRBV27-201ENST00000390399 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
TRBV27-201ENST00000390399 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
TRBV27-201ENST00000390399 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.43
TRBV27-201ENST00000390399 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
TRBV27-201ENST00000390399 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
TRBV27-201ENST00000390399 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
TRBV27-201ENST00000390399 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
TRBV27-201ENST00000390399 ANKRD24Q8TF21 1146 aa12.39□□□□□ -0.43
TRBV27-201ENST00000390399 IP6K1Q92551 441 aa12.39□□□□□ -0.43
TRBV27-201ENST00000390399 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
TRBV27-201ENST00000390399 DISP2A7MBM2 1401 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 BAG6P46379 1132 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 AMPHP49418 695 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 DDB1Q16531 1140 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
TRBV27-201ENST00000390399 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
TRBV27-201ENST00000390399 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
TRBV27-201ENST00000390399 FBLN1P23142 703 aa12.37□□□□□ -0.43
TRBV27-201ENST00000390399 HOXC9P31274 260 aa12.37□□□□□ -0.43
TRBV27-201ENST00000390399 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
TRBV27-201ENST00000390399 TRIM37O94972 964 aa12.36□□□□□ -0.43
TRBV27-201ENST00000390399 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
TRBV27-201ENST00000390399 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
TRBV27-201ENST00000390399 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
TRBV27-201ENST00000390399 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
TRBV27-201ENST00000390399 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
TRBV27-201ENST00000390399 PANK3Q9H999 370 aa12.34□□□□□ -0.43
TRBV27-201ENST00000390399 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
TRBV27-201ENST00000390399 FLT4P35916 1363 aa12.33□□□□□ -0.44
TRBV27-201ENST00000390399 EXOC5O00471 708 aa12.33□□□□□ -0.44
TRBV27-201ENST00000390399 IL2RBP14784 551 aa12.33□□□□□ -0.44
TRBV27-201ENST00000390399 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
TRBV27-201ENST00000390399 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
TRBV27-201ENST00000390399 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
TRBV27-201ENST00000390399 APBA3O96018 575 aa12.32□□□□□ -0.44
TRBV27-201ENST00000390399 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
TRBV27-201ENST00000390399 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
TRBV27-201ENST00000390399 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
TRBV27-201ENST00000390399 INSRP06213 1382 aa12.31□□□□□ -0.44
TRBV27-201ENST00000390399 BCL9O00512 1426 aa12.31□□□□□ -0.44
TRBV27-201ENST00000390399 EMILIN1Q9Y6C2 1016 aa12.31□□□□□ -0.44
TRBV27-201ENST00000390399 NSD2O96028 1365 aa12.3□□□□□ -0.44
TRBV27-201ENST00000390399 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
TRBV27-201ENST00000390399 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
TRBV27-201ENST00000390399 RREB1Q92766 1687 aa12.29□□□□□ -0.44
TRBV27-201ENST00000390399 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
TRBV27-201ENST00000390399 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
TRBV27-201ENST00000390399 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
TRBV27-201ENST00000390399 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
TRBV27-201ENST00000390399 MEGF6O75095 1541 aa12.28□□□□□ -0.44
TRBV27-201ENST00000390399 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
TRBV27-201ENST00000390399 CAMKK2Q96RR4 588 aa12.28□□□□□ -0.44
TRBV27-201ENST00000390399 NHSQ6T4R5 1651 aa12.28□□□□□ -0.44
TRBV27-201ENST00000390399 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.44
TRBV27-201ENST00000390399 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.45
TRBV27-201ENST00000390399 USHBP1Q8N6Y0 703 aa12.27□□□□□ -0.45
TRBV27-201ENST00000390399 NBPF4Q96M43 638 aa12.27□□□□□ -0.45
TRBV27-201ENST00000390399 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
TRBV27-201ENST00000390399 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
TRBV27-201ENST00000390399 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.45
TRBV27-201ENST00000390399 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
TRBV27-201ENST00000390399 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
TRBV27-201ENST00000390399 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
TRBV27-201ENST00000390399 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
TRBV27-201ENST00000390399 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
TRBV27-201ENST00000390399 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
TRBV27-201ENST00000390399 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
TRBV27-201ENST00000390399 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms