RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 ABCC6O95255 1503 aa23.97■■□□□ 1.43
IGKV4-1-201ENST00000390243 LRRC37A3O60309 1634 aa23.96■■□□□ 1.43
IGKV4-1-201ENST00000390243 NSD3Q9BZ95 1437 aa23.96■■□□□ 1.43
IGKV4-1-201ENST00000390243 ONECUT3O60422 494 aaPredicted RBP23.96■■□□□ 1.43
IGKV4-1-201ENST00000390243 CARD14Q9BXL6 1004 aa23.96■■□□□ 1.43
IGKV4-1-201ENST00000390243 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
IGKV4-1-201ENST00000390243 FBLN1P23142 703 aa23.95■■□□□ 1.42
IGKV4-1-201ENST00000390243 PEAK1Q9H792 1746 aa23.94■■□□□ 1.42
IGKV4-1-201ENST00000390243 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
IGKV4-1-201ENST00000390243 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
IGKV4-1-201ENST00000390243 CRB1P82279 1406 aa23.92■■□□□ 1.42
IGKV4-1-201ENST00000390243 ANKRD26Q9UPS8 1709 aa23.91■■□□□ 1.42
IGKV4-1-201ENST00000390243 SLC24A1O60721 1099 aa23.91■■□□□ 1.42
IGKV4-1-201ENST00000390243 KCNH5Q8NCM2 988 aa23.91■■□□□ 1.42
IGKV4-1-201ENST00000390243 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
IGKV4-1-201ENST00000390243 FAM182BQ5T319 152 aa23.9■■□□□ 1.42
IGKV4-1-201ENST00000390243 GGNBP2Q9H3C7 697 aa23.9■■□□□ 1.42
IGKV4-1-201ENST00000390243 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
IGKV4-1-201ENST00000390243 A0A0G2JS52 829 aa23.89■■□□□ 1.41
IGKV4-1-201ENST00000390243 MYT1Q01538 1121 aa23.89■■□□□ 1.41
IGKV4-1-201ENST00000390243 FYB1O15117 783 aa23.88■■□□□ 1.41
IGKV4-1-201ENST00000390243 CDCA8Q53HL2 280 aa23.88■■□□□ 1.41
IGKV4-1-201ENST00000390243 EVA1CP58658 441 aa23.87■■□□□ 1.41
IGKV4-1-201ENST00000390243 WDR17Q8IZU2 1322 aa23.86■■□□□ 1.41
IGKV4-1-201ENST00000390243 FAM208AQ9UK61 1670 aaKnown RBP23.86■■□□□ 1.41
IGKV4-1-201ENST00000390243 DISP2A7MBM2 1401 aa23.85■■□□□ 1.41
IGKV4-1-201ENST00000390243 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
IGKV4-1-201ENST00000390243 KRT27Q7Z3Y8 459 aa23.84■■□□□ 1.41
IGKV4-1-201ENST00000390243 ERBB3P21860 1342 aa23.84■■□□□ 1.41
IGKV4-1-201ENST00000390243 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
IGKV4-1-201ENST00000390243 TCP11L2Q8N4U5 519 aa23.83■■□□□ 1.41
IGKV4-1-201ENST00000390243 COG3Q96JB2 828 aa23.83■■□□□ 1.41
IGKV4-1-201ENST00000390243 BARGINQ6ZT62 677 aa23.82■■□□□ 1.4
IGKV4-1-201ENST00000390243 RRS1Q15050 365 aaKnown RBP23.81■■□□□ 1.4
IGKV4-1-201ENST00000390243 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
IGKV4-1-201ENST00000390243 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
IGKV4-1-201ENST00000390243 BLMP54132 1417 aaPredicted RBP23.79■■□□□ 1.4
IGKV4-1-201ENST00000390243 SBF2Q86WG5 1849 aa23.77■■□□□ 1.4
IGKV4-1-201ENST00000390243 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
IGKV4-1-201ENST00000390243 MAP2P11137 1827 aaKnown RBP23.76■■□□□ 1.39
IGKV4-1-201ENST00000390243 HOXC9P31274 260 aa23.76■■□□□ 1.39
IGKV4-1-201ENST00000390243 ANKRD24Q8TF21 1146 aa23.76■■□□□ 1.39
IGKV4-1-201ENST00000390243 PANK3Q9H999 370 aa23.76■■□□□ 1.39
IGKV4-1-201ENST00000390243 CSB-PGBD3P0DP91 1061 aa23.75■■□□□ 1.39
IGKV4-1-201ENST00000390243 IP6K1Q92551 441 aa23.74■■□□□ 1.39
IGKV4-1-201ENST00000390243 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
IGKV4-1-201ENST00000390243 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
IGKV4-1-201ENST00000390243 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
IGKV4-1-201ENST00000390243 DEFB132Q7Z7B7 95 aa23.73■■□□□ 1.39
IGKV4-1-201ENST00000390243 LTV1Q96GA3 475 aaPredicted RBP23.73■■□□□ 1.39
IGKV4-1-201ENST00000390243 EMILIN1Q9Y6C2 1016 aa23.72■■□□□ 1.39
IGKV4-1-201ENST00000390243 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
IGKV4-1-201ENST00000390243 TNS2Q63HR2 1409 aa23.72■■□□□ 1.39
IGKV4-1-201ENST00000390243 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
IGKV4-1-201ENST00000390243 CGNL1Q0VF96 1302 aa23.7■■□□□ 1.38
IGKV4-1-201ENST00000390243 MEGF6O75095 1541 aa23.69■■□□□ 1.38
IGKV4-1-201ENST00000390243 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
IGKV4-1-201ENST00000390243 AMPHP49418 695 aa23.68■■□□□ 1.38
IGKV4-1-201ENST00000390243 HSP90AB2PQ58FF8 381 aa23.67■■□□□ 1.38
IGKV4-1-201ENST00000390243 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
IGKV4-1-201ENST00000390243 FLT4P35916 1363 aa23.66■■□□□ 1.38
IGKV4-1-201ENST00000390243 RREB1Q92766 1687 aa23.66■■□□□ 1.38
IGKV4-1-201ENST00000390243 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
IGKV4-1-201ENST00000390243 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
IGKV4-1-201ENST00000390243 TRIM37O94972 964 aa23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 PDE3BQ13370 1112 aa23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 DDB1Q16531 1140 aa23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 INSRP06213 1382 aa23.64■■□□□ 1.37
IGKV4-1-201ENST00000390243 NUP188Q5SRE5 1749 aa23.63■■□□□ 1.37
IGKV4-1-201ENST00000390243 NHSQ6T4R5 1651 aa23.63■■□□□ 1.37
IGKV4-1-201ENST00000390243 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
IGKV4-1-201ENST00000390243 NBPF6Q5VWK0 638 aa23.61■■□□□ 1.37
IGKV4-1-201ENST00000390243 NBPF4Q96M43 638 aa23.61■■□□□ 1.37
IGKV4-1-201ENST00000390243 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
IGKV4-1-201ENST00000390243 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 DOT1LQ8TEK3 1739 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 FAM196AQ6ZSG2 479 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 CCDC125Q86Z20 511 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 NSD2O96028 1365 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
IGKV4-1-201ENST00000390243 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
IGKV4-1-201ENST00000390243 PER1O15534 1290 aaPredicted RBP23.58■■□□□ 1.37
IGKV4-1-201ENST00000390243 IL2RBP14784 551 aa23.58■■□□□ 1.37
IGKV4-1-201ENST00000390243 EN1Q05925 392 aaPredicted RBP23.58■■□□□ 1.37
IGKV4-1-201ENST00000390243 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
IGKV4-1-201ENST00000390243 RGPD3A6NKT7 1758 aaPredicted RBP23.56■■□□□ 1.36
IGKV4-1-201ENST00000390243 RGPD4Q7Z3J3 1758 aa23.56■■□□□ 1.36
IGKV4-1-201ENST00000390243 CDCA7Q9BWT1 371 aaPredicted RBP23.56■■□□□ 1.36
IGKV4-1-201ENST00000390243 BCL9O00512 1426 aa23.56■■□□□ 1.36
IGKV4-1-201ENST00000390243 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
IGKV4-1-201ENST00000390243 BTAF1O14981 1849 aa23.55■■□□□ 1.36
IGKV4-1-201ENST00000390243 SF3B2Q13435 895 aaKnown RBP23.53■■□□□ 1.36
IGKV4-1-201ENST00000390243 EZH2Q15910 746 aaKnown RBP23.53■■□□□ 1.36
IGKV4-1-201ENST00000390243 BAG6P46379 1132 aa23.52■■□□□ 1.36
IGKV4-1-201ENST00000390243 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.36
IGKV4-1-201ENST00000390243 EXOC5O00471 708 aa23.51■■□□□ 1.35
IGKV4-1-201ENST00000390243 KCNQ2O43526 872 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms