RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CENPJQ9HC77 1338 aaPredicted RBP31.01■■■□□ 2.56
CNEP1R1-201ENST00000389134 USP6P35125 1406 aa31.01■■■□□ 2.55
CNEP1R1-201ENST00000389134 CDCA7Q9BWT1 371 aaPredicted RBP31.01■■■□□ 2.55
CNEP1R1-201ENST00000389134 BCL9O00512 1426 aa30.99■■■□□ 2.55
CNEP1R1-201ENST00000389134 WDR17Q8IZU2 1322 aa30.98■■■□□ 2.55
CNEP1R1-201ENST00000389134 RGPD5Q99666 1765 aa30.98■■■□□ 2.55
CNEP1R1-201ENST00000389134 PTF1AQ7RTS3 328 aa30.98■■■□□ 2.55
CNEP1R1-201ENST00000389134 PROM2Q8N271 834 aa30.98■■■□□ 2.55
CNEP1R1-201ENST00000389134 CABP1Q9NZU7 370 aa30.98■■■□□ 2.55
CNEP1R1-201ENST00000389134 QRICH2Q9H0J4 1663 aa30.97■■■□□ 2.55
CNEP1R1-201ENST00000389134 MARCH10Q8NA82 808 aaPredicted RBP30.97■■■□□ 2.55
CNEP1R1-201ENST00000389134 CHD4Q14839 1912 aa30.96■■■□□ 2.55
CNEP1R1-201ENST00000389134 UTRNP46939 3433 aa30.96■■■□□ 2.55
CNEP1R1-201ENST00000389134 ZBTB7AO95365 584 aa30.95■■■□□ 2.55
CNEP1R1-201ENST00000389134 PDGFDQ9GZP0 370 aaPredicted RBP30.95■■■□□ 2.55
CNEP1R1-201ENST00000389134 PIK3C2AO00443 1686 aa30.94■■■□□ 2.54
CNEP1R1-201ENST00000389134 AXIN2Q9Y2T1 843 aa30.94■■■□□ 2.54
CNEP1R1-201ENST00000389134 MYOM1P52179 1685 aa30.93■■■□□ 2.54
CNEP1R1-201ENST00000389134 PTGER2P43116 358 aa30.92■■■□□ 2.54
CNEP1R1-201ENST00000389134 STK32BQ9NY57 414 aa30.92■■■□□ 2.54
CNEP1R1-201ENST00000389134 KAT6BQ8WYB5 2073 aa30.92■■■□□ 2.54
CNEP1R1-201ENST00000389134 CPSF1Q10570 1443 aaKnown RBP30.9■■■□□ 2.54
CNEP1R1-201ENST00000389134 CARD10Q9BWT7 1032 aa30.9■■■□□ 2.54
CNEP1R1-201ENST00000389134 TXNRD1Q16881 649 aa30.89■■■□□ 2.54
CNEP1R1-201ENST00000389134 ARHGEF25Q86VW2 580 aa30.89■■■□□ 2.54
CNEP1R1-201ENST00000389134 KCNH5Q8NCM2 988 aa30.89■■■□□ 2.54
CNEP1R1-201ENST00000389134 ATF5Q9Y2D1 282 aaPredicted RBP30.89■■■□□ 2.54
CNEP1R1-201ENST00000389134 EXOC5O00471 708 aa30.87■■■□□ 2.53
CNEP1R1-201ENST00000389134 SLC15A2Q16348 729 aa30.87■■■□□ 2.53
CNEP1R1-201ENST00000389134 CSB-PGBD3P0DP91 1061 aa30.86■■■□□ 2.53
CNEP1R1-201ENST00000389134 ZNF784Q8NCA9 323 aaPredicted RBP30.86■■■□□ 2.53
CNEP1R1-201ENST00000389134 ZNF692Q9BU19 519 aaPredicted RBP30.86■■■□□ 2.53
CNEP1R1-201ENST00000389134 EVC2Q86UK5 1308 aa30.84■■■□□ 2.53
CNEP1R1-201ENST00000389134 SYT17Q9BSW7 474 aa30.84■■■□□ 2.53
CNEP1R1-201ENST00000389134 FHDC1Q9C0D6 1143 aaPredicted RBP30.83■■■□□ 2.53
CNEP1R1-201ENST00000389134 MTFR1LQ9H019 292 aa30.83■■■□□ 2.53
CNEP1R1-201ENST00000389134 TTC21BQ7Z4L5 1316 aa30.82■■■□□ 2.52
CNEP1R1-201ENST00000389134 CCDC7Q96M83 1385 aa30.81■■■□□ 2.52
CNEP1R1-201ENST00000389134 TRPM1Q7Z4N2 1603 aa30.8■■■□□ 2.52
CNEP1R1-201ENST00000389134 TTC21AQ8NDW8 1320 aa30.79■■■□□ 2.52
CNEP1R1-201ENST00000389134 NHSQ6T4R5 1651 aa30.78■■■□□ 2.52
CNEP1R1-201ENST00000389134 SOX12O15370 315 aa30.78■■■□□ 2.52
CNEP1R1-201ENST00000389134 SGIP1Q9BQI5 828 aa30.78■■■□□ 2.52
CNEP1R1-201ENST00000389134 ABCC6O95255 1503 aa30.77■■■□□ 2.52
CNEP1R1-201ENST00000389134 TNS2Q63HR2 1409 aa30.76■■■□□ 2.51
CNEP1R1-201ENST00000389134 NFAT5O94916 1531 aa30.75■■■□□ 2.51
CNEP1R1-201ENST00000389134 ARXQ96QS3 562 aa30.72■■■□□ 2.51
CNEP1R1-201ENST00000389134 BTAF1O14981 1849 aa30.7■■■□□ 2.51
CNEP1R1-201ENST00000389134 PAPPAQ13219 1627 aa30.69■■■□□ 2.5
CNEP1R1-201ENST00000389134 MAP3K5Q99683 1374 aa30.69■■■□□ 2.5
CNEP1R1-201ENST00000389134 ACSBG1Q96GR2 724 aa30.69■■■□□ 2.5
CNEP1R1-201ENST00000389134 KTN1Q86UP2 1357 aaKnown RBP30.67■■■□□ 2.5
CNEP1R1-201ENST00000389134 MON2Q7Z3U7 1717 aa30.66■■■□□ 2.5
CNEP1R1-201ENST00000389134 LTN1O94822 1766 aa30.65■■■□□ 2.5
CNEP1R1-201ENST00000389134 SENP3-EIF4A1A0A087X0R7 540 aa30.64■■■□□ 2.5
CNEP1R1-201ENST00000389134 IL2RBP14784 551 aa30.64■■■□□ 2.5
CNEP1R1-201ENST00000389134 C1QTNF8P60827 252 aa30.64■■■□□ 2.5
CNEP1R1-201ENST00000389134 NLRP2Q9NX02 1062 aa30.64■■■□□ 2.5
CNEP1R1-201ENST00000389134 ERBB3P21860 1342 aa30.64■■■□□ 2.5
CNEP1R1-201ENST00000389134 L3MBTL2Q969R5 705 aa30.63■■■□□ 2.49
CNEP1R1-201ENST00000389134 USP54Q70EL1 1684 aa30.62■■■□□ 2.49
CNEP1R1-201ENST00000389134 QSER1Q2KHR3 1735 aa30.61■■■□□ 2.49
CNEP1R1-201ENST00000389134 USP31Q70CQ4 1352 aa30.61■■■□□ 2.49
CNEP1R1-201ENST00000389134 ZNF827Q17R98 1081 aa30.59■■■□□ 2.49
CNEP1R1-201ENST00000389134 GOLGB1Q14789 3259 aaKnown RBP30.58■■■□□ 2.49
CNEP1R1-201ENST00000389134 ROCK2O75116 1388 aaKnown RBP30.58■■■□□ 2.49
CNEP1R1-201ENST00000389134 GPR162Q16538 588 aa30.58■■■□□ 2.49
CNEP1R1-201ENST00000389134 SLC16A10Q8TF71 515 aa30.58■■■□□ 2.49
CNEP1R1-201ENST00000389134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.57■■■□□ 2.48
CNEP1R1-201ENST00000389134 LRRC4BQ9NT99 713 aa30.57■■■□□ 2.48
CNEP1R1-201ENST00000389134 COL24A1Q17RW2 1714 aa30.56■■■□□ 2.48
CNEP1R1-201ENST00000389134 SLC27A3Q5K4L6 730 aa30.54■■■□□ 2.48
CNEP1R1-201ENST00000389134 ANKRD24Q8TF21 1146 aa30.54■■■□□ 2.48
CNEP1R1-201ENST00000389134 POLD1P28340 1107 aa30.53■■■□□ 2.48
CNEP1R1-201ENST00000389134 AKT1S1Q96B36 256 aa30.53■■■□□ 2.48
CNEP1R1-201ENST00000389134 NME9Q86XW9 330 aa30.51■■■□□ 2.47
CNEP1R1-201ENST00000389134 TUBGCP6Q96RT7 1819 aa30.5■■■□□ 2.47
CNEP1R1-201ENST00000389134 KLHL34Q8N239 644 aa30.48■■■□□ 2.47
CNEP1R1-201ENST00000389134 SBNO2Q9Y2G9 1366 aa30.48■■■□□ 2.47
CNEP1R1-201ENST00000389134 GIGYF1O75420 1035 aaPredicted RBP30.47■■■□□ 2.47
CNEP1R1-201ENST00000389134 FAM208AQ9UK61 1670 aaKnown RBP30.46■■■□□ 2.47
CNEP1R1-201ENST00000389134 CD163L1Q9NR16 1453 aa30.46■■■□□ 2.47
CNEP1R1-201ENST00000389134 HDGFL2Q7Z4V5 671 aaPredicted RBP30.45■■■□□ 2.47
CNEP1R1-201ENST00000389134 PNPLA7Q6ZV29 1317 aa30.45■■■□□ 2.46
CNEP1R1-201ENST00000389134 CEP350Q5VT06 3117 aa30.44■■■□□ 2.46
CNEP1R1-201ENST00000389134 PELP1Q8IZL8 1130 aaKnown RBP30.44■■■□□ 2.46
CNEP1R1-201ENST00000389134 DDX54Q8TDD1 881 aaKnown RBP30.44■■■□□ 2.46
CNEP1R1-201ENST00000389134 TFCP2L1Q9NZI6 479 aa30.44■■■□□ 2.46
CNEP1R1-201ENST00000389134 LY75O60449 1722 aa30.43■■■□□ 2.46
CNEP1R1-201ENST00000389134 TMC1Q8TDI8 760 aa30.43■■■□□ 2.46
CNEP1R1-201ENST00000389134 EDC4Q6P2E9 1401 aaKnown RBP30.42■■■□□ 2.46
CNEP1R1-201ENST00000389134 SIN3AQ96ST3 1273 aa30.42■■■□□ 2.46
CNEP1R1-201ENST00000389134 IP6K1Q92551 441 aa30.41■■■□□ 2.46
CNEP1R1-201ENST00000389134 SYTL4Q96C24 671 aaPredicted RBP30.38■■■□□ 2.45
CNEP1R1-201ENST00000389134 SLC12A5Q9H2X9 1139 aa30.38■■■□□ 2.45
CNEP1R1-201ENST00000389134 TERF2IPQ9NYB0 399 aa30.38■■■□□ 2.45
CNEP1R1-201ENST00000389134 DOT1LQ8TEK3 1739 aa30.38■■■□□ 2.45
CNEP1R1-201ENST00000389134 PRIM1P49642 420 aaKnown RBP30.37■■■□□ 2.45
CNEP1R1-201ENST00000389134 NLGN2Q8NFZ4 835 aa30.37■■■□□ 2.45
CNEP1R1-201ENST00000389134 ANKRD36BQ8N2N9 1353 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms