RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 LRRC37A3O60309 1634 aa25.58■■□□□ 1.69
RPUSD3-201ENST00000383820 WDR17Q8IZU2 1322 aa25.58■■□□□ 1.69
RPUSD3-201ENST00000383820 ARHGEF25Q86VW2 580 aa25.57■■□□□ 1.68
RPUSD3-201ENST00000383820 DDB1Q16531 1140 aa25.56■■□□□ 1.68
RPUSD3-201ENST00000383820 CDCA7Q9BWT1 371 aaPredicted RBP25.56■■□□□ 1.68
RPUSD3-201ENST00000383820 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
RPUSD3-201ENST00000383820 AXIN2Q9Y2T1 843 aa25.55■■□□□ 1.68
RPUSD3-201ENST00000383820 WNK3Q9BYP7 1800 aa25.55■■□□□ 1.68
RPUSD3-201ENST00000383820 RGPD3A6NKT7 1758 aaPredicted RBP25.54■■□□□ 1.68
RPUSD3-201ENST00000383820 RGPD4Q7Z3J3 1758 aa25.54■■□□□ 1.68
RPUSD3-201ENST00000383820 SBF2Q86WG5 1849 aa25.53■■□□□ 1.68
RPUSD3-201ENST00000383820 KTN1Q86UP2 1357 aaKnown RBP25.53■■□□□ 1.68
RPUSD3-201ENST00000383820 ABCC6O95255 1503 aa25.52■■□□□ 1.68
RPUSD3-201ENST00000383820 PLSCR1O15162 318 aa25.51■■□□□ 1.67
RPUSD3-201ENST00000383820 CARD10Q9BWT7 1032 aa25.51■■□□□ 1.67
RPUSD3-201ENST00000383820 BCL9O00512 1426 aa25.51■■□□□ 1.67
RPUSD3-201ENST00000383820 NFAT5O94916 1531 aa25.51■■□□□ 1.67
RPUSD3-201ENST00000383820 MON2Q7Z3U7 1717 aa25.51■■□□□ 1.67
RPUSD3-201ENST00000383820 RGPD5Q99666 1765 aa25.5■■□□□ 1.67
RPUSD3-201ENST00000383820 BCL11BQ9C0K0 894 aaPredicted RBP25.48■■□□□ 1.67
RPUSD3-201ENST00000383820 USP31Q70CQ4 1352 aa25.46■■□□□ 1.67
RPUSD3-201ENST00000383820 USP54Q70EL1 1684 aa25.46■■□□□ 1.67
RPUSD3-201ENST00000383820 CSB-PGBD3P0DP91 1061 aa25.46■■□□□ 1.67
RPUSD3-201ENST00000383820 CCDC7Q96M83 1385 aa25.45■■□□□ 1.67
RPUSD3-201ENST00000383820 SOX12O15370 315 aa25.45■■□□□ 1.66
RPUSD3-201ENST00000383820 MARCH10Q8NA82 808 aaPredicted RBP25.45■■□□□ 1.66
RPUSD3-201ENST00000383820 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
RPUSD3-201ENST00000383820 SPON1Q9HCB6 807 aa25.42■■□□□ 1.66
RPUSD3-201ENST00000383820 CD163L1Q9NR16 1453 aa25.41■■□□□ 1.66
RPUSD3-201ENST00000383820 EXOC5O00471 708 aa25.41■■□□□ 1.66
RPUSD3-201ENST00000383820 KCNQ2O43526 872 aa25.4■■□□□ 1.66
RPUSD3-201ENST00000383820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.4■■□□□ 1.66
RPUSD3-201ENST00000383820 HDGFL2Q7Z4V5 671 aaPredicted RBP25.39■■□□□ 1.66
RPUSD3-201ENST00000383820 PUS7Q96PZ0 661 aaKnown RBP25.39■■□□□ 1.66
RPUSD3-201ENST00000383820 TNS2Q63HR2 1409 aa25.38■■□□□ 1.65
RPUSD3-201ENST00000383820 PTF1AQ7RTS3 328 aa25.38■■□□□ 1.65
RPUSD3-201ENST00000383820 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-201ENST00000383820 ERBB3P21860 1342 aa25.37■■□□□ 1.65
RPUSD3-201ENST00000383820 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
RPUSD3-201ENST00000383820 NME9Q86XW9 330 aa25.36■■□□□ 1.65
RPUSD3-201ENST00000383820 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
RPUSD3-201ENST00000383820 PROM2Q8N271 834 aa25.35■■□□□ 1.65
RPUSD3-201ENST00000383820 ANO8Q9HCE9 1232 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-201ENST00000383820 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
RPUSD3-201ENST00000383820 PPP1R1BQ9UD71 204 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-201ENST00000383820 LTN1O94822 1766 aa25.35■■□□□ 1.65
RPUSD3-201ENST00000383820 SLC12A5Q9H2X9 1139 aa25.34■■□□□ 1.65
RPUSD3-201ENST00000383820 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
RPUSD3-201ENST00000383820 NINLQ9Y2I6 1382 aa25.33■■□□□ 1.65
RPUSD3-201ENST00000383820 TXNRD1Q16881 649 aa25.31■■□□□ 1.64
RPUSD3-201ENST00000383820 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
RPUSD3-201ENST00000383820 A0A1W2PP64 1363 aa25.31■■□□□ 1.64
RPUSD3-201ENST00000383820 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
RPUSD3-201ENST00000383820 IL2RBP14784 551 aa25.29■■□□□ 1.64
RPUSD3-201ENST00000383820 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
RPUSD3-201ENST00000383820 ANKRD24Q8TF21 1146 aa25.28■■□□□ 1.64
RPUSD3-201ENST00000383820 STK32BQ9NY57 414 aa25.27■■□□□ 1.64
RPUSD3-201ENST00000383820 DCAF8L1A6NGE4 600 aa25.25■■□□□ 1.63
RPUSD3-201ENST00000383820 SLC15A2Q16348 729 aa25.25■■□□□ 1.63
RPUSD3-201ENST00000383820 TESK2Q96S53 571 aa25.24■■□□□ 1.63
RPUSD3-201ENST00000383820 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-201ENST00000383820 IP6K1Q92551 441 aa25.23■■□□□ 1.63
RPUSD3-201ENST00000383820 PDGFDQ9GZP0 370 aaPredicted RBP25.22■■□□□ 1.63
RPUSD3-201ENST00000383820 ACSBG1Q96GR2 724 aa25.21■■□□□ 1.63
RPUSD3-201ENST00000383820 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
RPUSD3-201ENST00000383820 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
RPUSD3-201ENST00000383820 YY1P25490 414 aa25.2■■□□□ 1.62
RPUSD3-201ENST00000383820 BTAF1O14981 1849 aa25.19■■□□□ 1.62
RPUSD3-201ENST00000383820 PTGER2P43116 358 aa25.19■■□□□ 1.62
RPUSD3-201ENST00000383820 COG3Q96JB2 828 aa25.18■■□□□ 1.62
RPUSD3-201ENST00000383820 PAPPAQ13219 1627 aa25.17■■□□□ 1.62
RPUSD3-201ENST00000383820 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
RPUSD3-201ENST00000383820 MYOM1P52179 1685 aa25.16■■□□□ 1.62
RPUSD3-201ENST00000383820 ATF5Q9Y2D1 282 aaPredicted RBP25.15■■□□□ 1.62
RPUSD3-201ENST00000383820 ANKRD36BQ8N2N9 1353 aa25.15■■□□□ 1.62
RPUSD3-201ENST00000383820 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
RPUSD3-201ENST00000383820 HOXC9P31274 260 aa25.13■■□□□ 1.61
RPUSD3-201ENST00000383820 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
RPUSD3-201ENST00000383820 KAT6BQ8WYB5 2073 aa25.12■■□□□ 1.61
RPUSD3-201ENST00000383820 AMPHP49418 695 aa25.11■■□□□ 1.61
RPUSD3-201ENST00000383820 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
RPUSD3-201ENST00000383820 RTL1A6NKG5 1358 aa25.1■■□□□ 1.61
RPUSD3-201ENST00000383820 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
RPUSD3-201ENST00000383820 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
RPUSD3-201ENST00000383820 TMF1P82094 1093 aa25.08■■□□□ 1.61
RPUSD3-201ENST00000383820 LRRC4BQ9NT99 713 aa25.08■■□□□ 1.61
RPUSD3-201ENST00000383820 SYT17Q9BSW7 474 aa25.07■■□□□ 1.6
RPUSD3-201ENST00000383820 FHDC1Q9C0D6 1143 aaPredicted RBP25.07■■□□□ 1.6
RPUSD3-201ENST00000383820 ZNF827Q17R98 1081 aa25.06■■□□□ 1.6
RPUSD3-201ENST00000383820 QSER1Q2KHR3 1735 aa25.06■■□□□ 1.6
RPUSD3-201ENST00000383820 USP47Q96K76 1375 aa25.05■■□□□ 1.6
RPUSD3-201ENST00000383820 FYB1O15117 783 aa25.05■■□□□ 1.6
RPUSD3-201ENST00000383820 ZCRB1Q8TBF4 217 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-201ENST00000383820 RGPD2P0DJD1 1756 aa25.05■■□□□ 1.6
RPUSD3-201ENST00000383820 FBLN1P23142 703 aa25.04■■□□□ 1.6
RPUSD3-201ENST00000383820 AKT1S1Q96B36 256 aa25.04■■□□□ 1.6
RPUSD3-201ENST00000383820 MAP3K5Q99683 1374 aa25.04■■□□□ 1.6
RPUSD3-201ENST00000383820 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
RPUSD3-201ENST00000383820 SHANK3Q9BYB0 1731 aa25.03■■□□□ 1.6
RPUSD3-201ENST00000383820 CDCA8Q53HL2 280 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms