RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
SHOX-202ENST00000381575 LTN1O94822 1766 aa20.09■□□□□ 0.81
SHOX-202ENST00000381575 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.81
SHOX-202ENST00000381575 THRAP3Q9Y2W1 955 aaKnown RBP20.08■□□□□ 0.81
SHOX-202ENST00000381575 APBA3O96018 575 aa20.08■□□□□ 0.8
SHOX-202ENST00000381575 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 RREB1Q92766 1687 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 USP54Q70EL1 1684 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 NME9Q86XW9 330 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 SLC12A5Q9H2X9 1139 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 LRP5O75197 1615 aa20.07■□□□□ 0.8
SHOX-202ENST00000381575 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
SHOX-202ENST00000381575 WDR17Q8IZU2 1322 aa20.06■□□□□ 0.8
SHOX-202ENST00000381575 R3HDM1Q15032 1099 aaKnown RBP20.06■□□□□ 0.8
SHOX-202ENST00000381575 KCNH5Q8NCM2 988 aa20.06■□□□□ 0.8
SHOX-202ENST00000381575 CAMKK2Q96RR4 588 aa20.06■□□□□ 0.8
SHOX-202ENST00000381575 CSB-PGBD3P0DP91 1061 aa20.04■□□□□ 0.8
SHOX-202ENST00000381575 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
SHOX-202ENST00000381575 ST20-MTHFSA0A0A6YYL1 179 aa20.02■□□□□ 0.8
SHOX-202ENST00000381575 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
SHOX-202ENST00000381575 OVOS2A0A0J9YW53 1432 aa20.02■□□□□ 0.8
SHOX-202ENST00000381575 OVOS2Q6IE36 1432 aa20.02■□□□□ 0.8
SHOX-202ENST00000381575 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.8
SHOX-202ENST00000381575 DDB1Q16531 1140 aa20.01■□□□□ 0.79
SHOX-202ENST00000381575 TESK2Q96S53 571 aa20.01■□□□□ 0.79
SHOX-202ENST00000381575 USP31Q70CQ4 1352 aa20.01■□□□□ 0.79
SHOX-202ENST00000381575 EDC4Q6P2E9 1401 aaKnown RBP20■□□□□ 0.79
SHOX-202ENST00000381575 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
SHOX-202ENST00000381575 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
SHOX-202ENST00000381575 ABCC6O95255 1503 aa19.98■□□□□ 0.79
SHOX-202ENST00000381575 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
SHOX-202ENST00000381575 CARD10Q9BWT7 1032 aa19.97■□□□□ 0.79
SHOX-202ENST00000381575 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
SHOX-202ENST00000381575 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
SHOX-202ENST00000381575 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
SHOX-202ENST00000381575 RGPD3A6NKT7 1758 aaPredicted RBP19.94■□□□□ 0.78
SHOX-202ENST00000381575 RGPD4Q7Z3J3 1758 aa19.94■□□□□ 0.78
SHOX-202ENST00000381575 ERBB3P21860 1342 aa19.93■□□□□ 0.78
SHOX-202ENST00000381575 USP47Q96K76 1375 aa19.93■□□□□ 0.78
SHOX-202ENST00000381575 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
SHOX-202ENST00000381575 RGPD2P0DJD1 1756 aa19.92■□□□□ 0.78
SHOX-202ENST00000381575 TNS2Q63HR2 1409 aa19.92■□□□□ 0.78
SHOX-202ENST00000381575 CDCA7Q9BWT1 371 aaPredicted RBP19.92■□□□□ 0.78
SHOX-202ENST00000381575 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
SHOX-202ENST00000381575 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
SHOX-202ENST00000381575 FBLN1P23142 703 aa19.9■□□□□ 0.78
SHOX-202ENST00000381575 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
SHOX-202ENST00000381575 EXOC5O00471 708 aa19.89■□□□□ 0.77
SHOX-202ENST00000381575 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
SHOX-202ENST00000381575 BCL11BQ9C0K0 894 aaPredicted RBP19.89■□□□□ 0.77
SHOX-202ENST00000381575 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.77
SHOX-202ENST00000381575 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
SHOX-202ENST00000381575 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
SHOX-202ENST00000381575 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
SHOX-202ENST00000381575 NHSQ6T4R5 1651 aa19.87■□□□□ 0.77
SHOX-202ENST00000381575 FAM208AQ9UK61 1670 aaKnown RBP19.87■□□□□ 0.77
SHOX-202ENST00000381575 KIF20BQ96Q89 1820 aa19.87■□□□□ 0.77
SHOX-202ENST00000381575 KCNQ2O43526 872 aa19.86■□□□□ 0.77
SHOX-202ENST00000381575 MYOM1P52179 1685 aa19.86■□□□□ 0.77
SHOX-202ENST00000381575 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
SHOX-202ENST00000381575 ACSBG1Q96GR2 724 aa19.86■□□□□ 0.77
SHOX-202ENST00000381575 COG3Q96JB2 828 aa19.86■□□□□ 0.77
SHOX-202ENST00000381575 BCL9O00512 1426 aa19.85■□□□□ 0.77
SHOX-202ENST00000381575 TMF1P82094 1093 aa19.85■□□□□ 0.77
SHOX-202ENST00000381575 BTAF1O14981 1849 aa19.85■□□□□ 0.77
SHOX-202ENST00000381575 MAP3K19Q56UN5 1328 aa19.84■□□□□ 0.77
SHOX-202ENST00000381575 PLSCR1O15162 318 aa19.84■□□□□ 0.77
SHOX-202ENST00000381575 IL2RBP14784 551 aa19.84■□□□□ 0.77
SHOX-202ENST00000381575 IP6K1Q92551 441 aa19.84■□□□□ 0.77
SHOX-202ENST00000381575 PROM2Q8N271 834 aa19.83■□□□□ 0.77
SHOX-202ENST00000381575 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.76
SHOX-202ENST00000381575 CASZ1Q86V15 1759 aa19.82■□□□□ 0.76
SHOX-202ENST00000381575 HOXC9P31274 260 aa19.81■□□□□ 0.76
SHOX-202ENST00000381575 AMPHP49418 695 aa19.81■□□□□ 0.76
SHOX-202ENST00000381575 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
SHOX-202ENST00000381575 SHANK3Q9BYB0 1731 aa19.8■□□□□ 0.76
SHOX-202ENST00000381575 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
SHOX-202ENST00000381575 PDGFDQ9GZP0 370 aaPredicted RBP19.8■□□□□ 0.76
SHOX-202ENST00000381575 FYB1O15117 783 aa19.79■□□□□ 0.76
SHOX-202ENST00000381575 TXNRD1Q16881 649 aa19.79■□□□□ 0.76
SHOX-202ENST00000381575 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
SHOX-202ENST00000381575 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.75
SHOX-202ENST00000381575 MEGF6O75095 1541 aa19.75■□□□□ 0.75
SHOX-202ENST00000381575 USHBP1Q8N6Y0 703 aa19.75■□□□□ 0.75
SHOX-202ENST00000381575 SPON1Q9HCB6 807 aa19.75■□□□□ 0.75
SHOX-202ENST00000381575 NSD3Q9BZ95 1437 aa19.74■□□□□ 0.75
SHOX-202ENST00000381575 RTL1A6NKG5 1358 aa19.73■□□□□ 0.75
SHOX-202ENST00000381575 ZBTB7AO95365 584 aa19.73■□□□□ 0.75
SHOX-202ENST00000381575 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
SHOX-202ENST00000381575 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
SHOX-202ENST00000381575 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
SHOX-202ENST00000381575 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
SHOX-202ENST00000381575 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
SHOX-202ENST00000381575 STK32BQ9NY57 414 aa19.72■□□□□ 0.75
SHOX-202ENST00000381575 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
SHOX-202ENST00000381575 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
SHOX-202ENST00000381575 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
SHOX-202ENST00000381575 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
SHOX-202ENST00000381575 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
SHOX-202ENST00000381575 HSP90AB2PQ58FF8 381 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms