RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 AATKQ6ZMQ8 1374 aa26.65■■□□□ 1.86
GTF3A-201ENST00000381140 FBLN1P23142 703 aa26.64■■□□□ 1.86
GTF3A-201ENST00000381140 RGS12O14924 1447 aa26.62■■□□□ 1.85
GTF3A-201ENST00000381140 AXIN2Q9Y2T1 843 aa26.61■■□□□ 1.85
GTF3A-201ENST00000381140 COL5A2P05997 1499 aaPredicted RBP26.61■■□□□ 1.85
GTF3A-201ENST00000381140 KNSTRNQ9Y448 316 aa26.6■■□□□ 1.85
GTF3A-201ENST00000381140 CDK12Q9NYV4 1490 aaPredicted RBP26.6■■□□□ 1.85
GTF3A-201ENST00000381140 LARP1Q6PKG0 1096 aaKnown RBP26.59■■□□□ 1.85
GTF3A-201ENST00000381140 USP35Q9P2H5 1018 aa26.59■■□□□ 1.85
GTF3A-201ENST00000381140 MAP2P11137 1827 aaKnown RBP26.59■■□□□ 1.85
GTF3A-201ENST00000381140 SPATA31A5Q5VU36 1347 aa26.58■■□□□ 1.85
GTF3A-201ENST00000381140 SPATA31A7Q8IWB4 1347 aa26.58■■□□□ 1.85
GTF3A-201ENST00000381140 A0A0G2JS52 829 aa26.58■■□□□ 1.84
GTF3A-201ENST00000381140 MYT1Q01538 1121 aa26.58■■□□□ 1.84
GTF3A-201ENST00000381140 CSB-PGBD3P0DP91 1061 aa26.57■■□□□ 1.84
GTF3A-201ENST00000381140 RRS1Q15050 365 aaKnown RBP26.57■■□□□ 1.84
GTF3A-201ENST00000381140 MAP3K19Q56UN5 1328 aa26.56■■□□□ 1.84
GTF3A-201ENST00000381140 BRWD3Q6RI45 1802 aa26.56■■□□□ 1.84
GTF3A-201ENST00000381140 ABCC6O95255 1503 aa26.56■■□□□ 1.84
GTF3A-201ENST00000381140 TNNT2P45379 298 aaPredicted RBP26.56■■□□□ 1.84
GTF3A-201ENST00000381140 AMPHP49418 695 aa26.56■■□□□ 1.84
GTF3A-201ENST00000381140 FAM98CQ17RN3 349 aaKnown RBP26.55■■□□□ 1.84
GTF3A-201ENST00000381140 SPATA31A1Q5TZJ5 1347 aa26.55■■□□□ 1.84
GTF3A-201ENST00000381140 CNGB1Q14028 1251 aaPredicted RBP26.53■■□□□ 1.84
GTF3A-201ENST00000381140 TOM1L2Q6ZVM7 507 aa26.53■■□□□ 1.84
GTF3A-201ENST00000381140 LTV1Q96GA3 475 aaPredicted RBP26.52■■□□□ 1.84
GTF3A-201ENST00000381140 NSD2O96028 1365 aa26.52■■□□□ 1.84
GTF3A-201ENST00000381140 CRB1P82279 1406 aa26.52■■□□□ 1.84
GTF3A-201ENST00000381140 IP6K1Q92551 441 aa26.51■■□□□ 1.83
GTF3A-201ENST00000381140 PEAK1Q9H792 1746 aa26.51■■□□□ 1.83
GTF3A-201ENST00000381140 WDR17Q8IZU2 1322 aa26.51■■□□□ 1.83
GTF3A-201ENST00000381140 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
GTF3A-201ENST00000381140 PPM1GO15355 546 aaPredicted RBP26.49■■□□□ 1.83
GTF3A-201ENST00000381140 HOXC9P31274 260 aa26.49■■□□□ 1.83
GTF3A-201ENST00000381140 SEPT12Q8IYM1 358 aa26.49■■□□□ 1.83
GTF3A-201ENST00000381140 ANKRD24Q8TF21 1146 aa26.49■■□□□ 1.83
GTF3A-201ENST00000381140 RGPD2P0DJD1 1756 aa26.49■■□□□ 1.83
GTF3A-201ENST00000381140 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
GTF3A-201ENST00000381140 PER1O15534 1290 aaPredicted RBP26.47■■□□□ 1.83
GTF3A-201ENST00000381140 AMER1Q5JTC6 1135 aaPredicted RBP26.47■■□□□ 1.83
GTF3A-201ENST00000381140 CC2D1BQ5T0F9 858 aaKnown RBP26.47■■□□□ 1.83
GTF3A-201ENST00000381140 TCP11L2Q8N4U5 519 aa26.47■■□□□ 1.83
GTF3A-201ENST00000381140 EMILIN1Q9Y6C2 1016 aa26.47■■□□□ 1.83
GTF3A-201ENST00000381140 WNK3Q9BYP7 1800 aa26.47■■□□□ 1.83
GTF3A-201ENST00000381140 ERBB3P21860 1342 aa26.47■■□□□ 1.83
GTF3A-201ENST00000381140 NLRP2Q9NX02 1062 aa26.46■■□□□ 1.83
GTF3A-201ENST00000381140 THSD7AQ9UPZ6 1657 aa26.46■■□□□ 1.83
GTF3A-201ENST00000381140 RTL1A6NKG5 1358 aa26.46■■□□□ 1.83
GTF3A-201ENST00000381140 SOCS7O14512 581 aa26.46■■□□□ 1.83
GTF3A-201ENST00000381140 FAM208AQ9UK61 1670 aaKnown RBP26.45■■□□□ 1.83
GTF3A-201ENST00000381140 ONECUT3O60422 494 aaPredicted RBP26.44■■□□□ 1.82
GTF3A-201ENST00000381140 FLT4P35916 1363 aa26.43■■□□□ 1.82
GTF3A-201ENST00000381140 HSP90AB2PQ58FF8 381 aa26.42■■□□□ 1.82
GTF3A-201ENST00000381140 BARGINQ6ZT62 677 aa26.42■■□□□ 1.82
GTF3A-201ENST00000381140 CARD10Q9BWT7 1032 aa26.42■■□□□ 1.82
GTF3A-201ENST00000381140 THRAP3Q9Y2W1 955 aaKnown RBP26.42■■□□□ 1.82
GTF3A-201ENST00000381140 POLKQ9UBT6 870 aa26.41■■□□□ 1.82
GTF3A-201ENST00000381140 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
GTF3A-201ENST00000381140 KIF24Q5T7B8 1368 aa26.39■■□□□ 1.81
GTF3A-201ENST00000381140 KRT27Q7Z3Y8 459 aa26.38■■□□□ 1.81
GTF3A-201ENST00000381140 PARP4Q9UKK3 1724 aaKnown RBP26.38■■□□□ 1.81
GTF3A-201ENST00000381140 INSRP06213 1382 aa26.38■■□□□ 1.81
GTF3A-201ENST00000381140 DDX10Q13206 875 aaKnown RBP26.36■■□□□ 1.81
GTF3A-201ENST00000381140 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
GTF3A-201ENST00000381140 LRRC37A3O60309 1634 aa26.35■■□□□ 1.81
GTF3A-201ENST00000381140 NPC1L1Q9UHC9 1359 aa26.35■■□□□ 1.81
GTF3A-201ENST00000381140 FAM182BQ5T319 152 aa26.33■■□□□ 1.81
GTF3A-201ENST00000381140 PDE3BQ13370 1112 aa26.32■■□□□ 1.8
GTF3A-201ENST00000381140 USHBP1Q8N6Y0 703 aa26.32■■□□□ 1.8
GTF3A-201ENST00000381140 DDB1Q16531 1140 aa26.3■■□□□ 1.8
GTF3A-201ENST00000381140 NBPF6Q5VWK0 638 aa26.3■■□□□ 1.8
GTF3A-201ENST00000381140 NBPF4Q96M43 638 aa26.3■■□□□ 1.8
GTF3A-201ENST00000381140 CDCA7Q9BWT1 371 aaPredicted RBP26.3■■□□□ 1.8
GTF3A-201ENST00000381140 DISP2A7MBM2 1401 aa26.29■■□□□ 1.8
GTF3A-201ENST00000381140 IL2RBP14784 551 aa26.29■■□□□ 1.8
GTF3A-201ENST00000381140 MTHFSP49914 203 aa26.27■■□□□ 1.8
GTF3A-201ENST00000381140 UPF1Q92900 1129 aaKnown RBP eCLIP26.27■■□□□ 1.8
GTF3A-201ENST00000381140 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
GTF3A-201ENST00000381140 EXOC5O00471 708 aa26.24■■□□□ 1.79
GTF3A-201ENST00000381140 KAT6BQ8WYB5 2073 aa26.24■■□□□ 1.79
GTF3A-201ENST00000381140 EP400Q96L91 3159 aa26.23■■□□□ 1.79
GTF3A-201ENST00000381140 TNS2Q63HR2 1409 aa26.22■■□□□ 1.79
GTF3A-201ENST00000381140 EYA1Q99502 592 aa26.21■■□□□ 1.79
GTF3A-201ENST00000381140 MEGF6O75095 1541 aa26.21■■□□□ 1.79
GTF3A-201ENST00000381140 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.79
GTF3A-201ENST00000381140 SBF2Q86WG5 1849 aa26.18■■□□□ 1.78
GTF3A-201ENST00000381140 TATP17735 454 aaPredicted RBP26.18■■□□□ 1.78
GTF3A-201ENST00000381140 FAM196AQ6ZSG2 479 aa26.18■■□□□ 1.78
GTF3A-201ENST00000381140 MARCH10Q8NA82 808 aaPredicted RBP26.18■■□□□ 1.78
GTF3A-201ENST00000381140 RGPD1P0DJD0 1748 aa26.17■■□□□ 1.78
GTF3A-201ENST00000381140 OVOS2A0A0G2JMS6 1433 aa26.17■■□□□ 1.78
GTF3A-201ENST00000381140 SHANK3Q9BYB0 1731 aa26.17■■□□□ 1.78
GTF3A-201ENST00000381140 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
GTF3A-201ENST00000381140 DDX54Q8TDD1 881 aaKnown RBP26.15■■□□□ 1.78
GTF3A-201ENST00000381140 TRIM37O94972 964 aa26.14■■□□□ 1.78
GTF3A-201ENST00000381140 SF3B2Q13435 895 aaKnown RBP26.14■■□□□ 1.78
GTF3A-201ENST00000381140 NCAPD2Q15021 1401 aa26.13■■□□□ 1.77
GTF3A-201ENST00000381140 IL13P35225 146 aa26.13■■□□□ 1.77
GTF3A-201ENST00000381140 ZCRB1Q8TBF4 217 aaKnown RBP26.13■■□□□ 1.77
GTF3A-201ENST00000381140 PARD3Q8TEW0 1356 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms