RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TRPM1Q7Z4N2 1603 aa22.92■■□□□ 1.26
VCX3A-201ENST00000381089 PEAK1Q9H792 1746 aa22.91■■□□□ 1.26
VCX3A-201ENST00000381089 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
VCX3A-201ENST00000381089 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
VCX3A-201ENST00000381089 KCNQ2O43526 872 aa22.9■■□□□ 1.26
VCX3A-201ENST00000381089 CSB-PGBD3P0DP91 1061 aa22.9■■□□□ 1.26
VCX3A-201ENST00000381089 BCL11BQ9C0K0 894 aaPredicted RBP22.9■■□□□ 1.26
VCX3A-201ENST00000381089 TTC21BQ7Z4L5 1316 aa22.89■■□□□ 1.26
VCX3A-201ENST00000381089 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
VCX3A-201ENST00000381089 COL18A1P39060 1754 aa22.89■■□□□ 1.25
VCX3A-201ENST00000381089 SBF2Q86WG5 1849 aa22.88■■□□□ 1.25
VCX3A-201ENST00000381089 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
VCX3A-201ENST00000381089 AXIN2Q9Y2T1 843 aa22.87■■□□□ 1.25
VCX3A-201ENST00000381089 WNK3Q9BYP7 1800 aa22.87■■□□□ 1.25
VCX3A-201ENST00000381089 SOX12O15370 315 aa22.86■■□□□ 1.25
VCX3A-201ENST00000381089 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
VCX3A-201ENST00000381089 NINLQ9Y2I6 1382 aa22.86■■□□□ 1.25
VCX3A-201ENST00000381089 BCL9O00512 1426 aa22.85■■□□□ 1.25
VCX3A-201ENST00000381089 AKAP12Q02952 1782 aa22.85■■□□□ 1.25
VCX3A-201ENST00000381089 YY1P25490 414 aa22.84■■□□□ 1.25
VCX3A-201ENST00000381089 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
VCX3A-201ENST00000381089 EXOC5O00471 708 aa22.83■■□□□ 1.25
VCX3A-201ENST00000381089 MARCH10Q8NA82 808 aaPredicted RBP22.83■■□□□ 1.25
VCX3A-201ENST00000381089 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
VCX3A-201ENST00000381089 ABCC6O95255 1503 aa22.82■■□□□ 1.24
VCX3A-201ENST00000381089 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
VCX3A-201ENST00000381089 SIN3AQ96ST3 1273 aa22.81■■□□□ 1.24
VCX3A-201ENST00000381089 RGPD5Q99666 1765 aa22.8■■□□□ 1.24
VCX3A-201ENST00000381089 ANO8Q9HCE9 1232 aaPredicted RBP22.79■■□□□ 1.24
VCX3A-201ENST00000381089 NFAT5O94916 1531 aa22.78■■□□□ 1.24
VCX3A-201ENST00000381089 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
VCX3A-201ENST00000381089 PTF1AQ7RTS3 328 aa22.77■■□□□ 1.24
VCX3A-201ENST00000381089 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
VCX3A-201ENST00000381089 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
VCX3A-201ENST00000381089 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
VCX3A-201ENST00000381089 MON2Q7Z3U7 1717 aa22.75■■□□□ 1.23
VCX3A-201ENST00000381089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.75■■□□□ 1.23
VCX3A-201ENST00000381089 PROM2Q8N271 834 aa22.75■■□□□ 1.23
VCX3A-201ENST00000381089 CASZ1Q86V15 1759 aa22.75■■□□□ 1.23
VCX3A-201ENST00000381089 USP31Q70CQ4 1352 aa22.74■■□□□ 1.23
VCX3A-201ENST00000381089 ZBTB7AO95365 584 aa22.73■■□□□ 1.23
VCX3A-201ENST00000381089 HDGFL2Q7Z4V5 671 aaPredicted RBP22.73■■□□□ 1.23
VCX3A-201ENST00000381089 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
VCX3A-201ENST00000381089 TMC1Q8TDI8 760 aa22.72■■□□□ 1.23
VCX3A-201ENST00000381089 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
VCX3A-201ENST00000381089 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
VCX3A-201ENST00000381089 ERBB3P21860 1342 aa22.71■■□□□ 1.23
VCX3A-201ENST00000381089 IL2RBP14784 551 aa22.7■■□□□ 1.22
VCX3A-201ENST00000381089 USP54Q70EL1 1684 aa22.69■■□□□ 1.22
VCX3A-201ENST00000381089 NHSQ6T4R5 1651 aa22.68■■□□□ 1.22
VCX3A-201ENST00000381089 NME9Q86XW9 330 aa22.68■■□□□ 1.22
VCX3A-201ENST00000381089 PDGFDQ9GZP0 370 aaPredicted RBP22.68■■□□□ 1.22
VCX3A-201ENST00000381089 TERF2IPQ9NYB0 399 aa22.68■■□□□ 1.22
VCX3A-201ENST00000381089 ATF5Q9Y2D1 282 aaPredicted RBP22.68■■□□□ 1.22
VCX3A-201ENST00000381089 ACSBG1Q96GR2 724 aa22.67■■□□□ 1.22
VCX3A-201ENST00000381089 MTFR1LQ9H019 292 aa22.67■■□□□ 1.22
VCX3A-201ENST00000381089 LTN1O94822 1766 aa22.67■■□□□ 1.22
VCX3A-201ENST00000381089 EDC4Q6P2E9 1401 aaKnown RBP22.66■■□□□ 1.22
VCX3A-201ENST00000381089 ANKRD24Q8TF21 1146 aa22.66■■□□□ 1.22
VCX3A-201ENST00000381089 PTGER2P43116 358 aa22.65■■□□□ 1.22
VCX3A-201ENST00000381089 CD163L1Q9NR16 1453 aa22.65■■□□□ 1.22
VCX3A-201ENST00000381089 MYOM1P52179 1685 aa22.65■■□□□ 1.22
VCX3A-201ENST00000381089 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
VCX3A-201ENST00000381089 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
VCX3A-201ENST00000381089 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
VCX3A-201ENST00000381089 TONSLQ96HA7 1378 aa22.61■■□□□ 1.21
VCX3A-201ENST00000381089 FHDC1Q9C0D6 1143 aaPredicted RBP22.6■■□□□ 1.21
VCX3A-201ENST00000381089 A0A1W2PP64 1363 aa22.6■■□□□ 1.21
VCX3A-201ENST00000381089 SYT17Q9BSW7 474 aa22.59■■□□□ 1.21
VCX3A-201ENST00000381089 BTAF1O14981 1849 aa22.59■■□□□ 1.21
VCX3A-201ENST00000381089 IP6K1Q92551 441 aa22.58■■□□□ 1.21
VCX3A-201ENST00000381089 SLC24A1O60721 1099 aa22.57■■□□□ 1.2
VCX3A-201ENST00000381089 ARXQ96QS3 562 aa22.57■■□□□ 1.2
VCX3A-201ENST00000381089 FAM208AQ9UK61 1670 aaKnown RBP22.57■■□□□ 1.2
VCX3A-201ENST00000381089 PAPPAQ13219 1627 aa22.56■■□□□ 1.2
VCX3A-201ENST00000381089 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
VCX3A-201ENST00000381089 DDX54Q8TDD1 881 aaKnown RBP22.55■■□□□ 1.2
VCX3A-201ENST00000381089 COG3Q96JB2 828 aa22.55■■□□□ 1.2
VCX3A-201ENST00000381089 SGIP1Q9BQI5 828 aa22.55■■□□□ 1.2
VCX3A-201ENST00000381089 LTV1Q96GA3 475 aaPredicted RBP22.54■■□□□ 1.2
VCX3A-201ENST00000381089 AMPHP49418 695 aa22.52■■□□□ 1.2
VCX3A-201ENST00000381089 MAP3K5Q99683 1374 aa22.51■■□□□ 1.19
VCX3A-201ENST00000381089 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
VCX3A-201ENST00000381089 SLC16A10Q8TF71 515 aa22.51■■□□□ 1.19
VCX3A-201ENST00000381089 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
VCX3A-201ENST00000381089 LRRC4BQ9NT99 713 aa22.51■■□□□ 1.19
VCX3A-201ENST00000381089 POLD1P28340 1107 aa22.5■■□□□ 1.19
VCX3A-201ENST00000381089 UTRNP46939 3433 aa22.5■■□□□ 1.19
VCX3A-201ENST00000381089 ZNF784Q8NCA9 323 aaPredicted RBP22.49■■□□□ 1.19
VCX3A-201ENST00000381089 HOXC9P31274 260 aa22.48■■□□□ 1.19
VCX3A-201ENST00000381089 AKT1S1Q96B36 256 aa22.48■■□□□ 1.19
VCX3A-201ENST00000381089 CHD4Q14839 1912 aa22.48■■□□□ 1.19
VCX3A-201ENST00000381089 TFCP2L1Q9NZI6 479 aa22.47■■□□□ 1.19
VCX3A-201ENST00000381089 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
VCX3A-201ENST00000381089 ANKRD36BQ8N2N9 1353 aa22.47■■□□□ 1.19
VCX3A-201ENST00000381089 QSER1Q2KHR3 1735 aa22.46■■□□□ 1.19
VCX3A-201ENST00000381089 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
VCX3A-201ENST00000381089 ZCRB1Q8TBF4 217 aaKnown RBP22.46■■□□□ 1.19
VCX3A-201ENST00000381089 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
VCX3A-201ENST00000381089 GPR162Q16538 588 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms