RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 PTMSP20962 102 aa16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 ZNF445P59923 1031 aa16.59■□□□□ 0.25
EIF3CL-201ENST00000380876 MAP3K4Q9Y6R4 1608 aa16.58■□□□□ 0.25
EIF3CL-201ENST00000380876 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
EIF3CL-201ENST00000380876 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
EIF3CL-201ENST00000380876 RABEP1Q15276 862 aa16.58■□□□□ 0.24
EIF3CL-201ENST00000380876 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
EIF3CL-201ENST00000380876 NUCB2P80303 420 aa16.57■□□□□ 0.24
EIF3CL-201ENST00000380876 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
EIF3CL-201ENST00000380876 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
EIF3CL-201ENST00000380876 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
EIF3CL-201ENST00000380876 SDSP20132 328 aa16.56■□□□□ 0.24
EIF3CL-201ENST00000380876 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
EIF3CL-201ENST00000380876 A0A0U1RQG5 324 aaPredicted RBP16.55■□□□□ 0.24
EIF3CL-201ENST00000380876 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
EIF3CL-201ENST00000380876 ALDH1L2Q3SY69 923 aa16.55■□□□□ 0.24
EIF3CL-201ENST00000380876 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
EIF3CL-201ENST00000380876 ANKRD36BQ8N2N9 1353 aa16.55■□□□□ 0.24
EIF3CL-201ENST00000380876 NEK4P51957 841 aa16.54■□□□□ 0.24
EIF3CL-201ENST00000380876 TTC22Q5TAA0 569 aa16.54■□□□□ 0.24
EIF3CL-201ENST00000380876 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
EIF3CL-201ENST00000380876 ST18O60284 1047 aa16.52■□□□□ 0.24
EIF3CL-201ENST00000380876 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 LRSAM1Q6UWE0 723 aa16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.23
EIF3CL-201ENST00000380876 ABCC1P33527 1531 aa16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 ZNF500O60304 480 aaPredicted RBP16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
EIF3CL-201ENST00000380876 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
EIF3CL-201ENST00000380876 IL16Q14005 1332 aa16.5■□□□□ 0.23
EIF3CL-201ENST00000380876 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
EIF3CL-201ENST00000380876 MROH2AA6NES4 1674 aa16.5■□□□□ 0.23
EIF3CL-201ENST00000380876 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
EIF3CL-201ENST00000380876 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
EIF3CL-201ENST00000380876 CBX1P83916 185 aa16.49■□□□□ 0.23
EIF3CL-201ENST00000380876 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
EIF3CL-201ENST00000380876 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
EIF3CL-201ENST00000380876 MYOM2P54296 1465 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 ZFYVE16Q7Z3T8 1539 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
EIF3CL-201ENST00000380876 IGSF3O75054 1194 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 MEIS3Q99687 375 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 FCHSD2O94868 740 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
EIF3CL-201ENST00000380876 TET3O43151 1660 aa16.46■□□□□ 0.23
EIF3CL-201ENST00000380876 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
EIF3CL-201ENST00000380876 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
EIF3CL-201ENST00000380876 RILPL2Q969X0 211 aa16.46■□□□□ 0.23
EIF3CL-201ENST00000380876 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 ABCC4O15439 1325 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 SOX12O15370 315 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 GNAI1P63096 354 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 KIF1BO60333 1816 aa16.45■□□□□ 0.22
EIF3CL-201ENST00000380876 F6X3S4 739 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 HS1BP3Q53T59 392 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 TRIM6-TRIM34B2RNG4 842 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 DYNC1I1O14576 645 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 CDK19Q9BWU1 502 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
EIF3CL-201ENST00000380876 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
EIF3CL-201ENST00000380876 CEP85Q6P2H3 762 aa16.43■□□□□ 0.22
EIF3CL-201ENST00000380876 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
EIF3CL-201ENST00000380876 ERC2O15083 957 aa16.42■□□□□ 0.22
EIF3CL-201ENST00000380876 MCM10Q7L590 875 aa16.42■□□□□ 0.22
EIF3CL-201ENST00000380876 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
EIF3CL-201ENST00000380876 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
EIF3CL-201ENST00000380876 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
EIF3CL-201ENST00000380876 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms