RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 HOXC9P31274 260 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 IP6K1Q92551 441 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
SMN1-202ENST00000380707 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 AFF2P51816 1311 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
SMN1-202ENST00000380707 PLCH1Q4KWH8 1693 aa17.15■□□□□ 0.34
SMN1-202ENST00000380707 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
SMN1-202ENST00000380707 MTHFSP49914 203 aa17.15■□□□□ 0.34
SMN1-202ENST00000380707 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
SMN1-202ENST00000380707 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
SMN1-202ENST00000380707 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
SMN1-202ENST00000380707 FLT4P35916 1363 aa17.14■□□□□ 0.33
SMN1-202ENST00000380707 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
SMN1-202ENST00000380707 USP21Q9UK80 565 aa17.14■□□□□ 0.33
SMN1-202ENST00000380707 ABCC6O95255 1503 aa17.13■□□□□ 0.33
SMN1-202ENST00000380707 RGPD5Q99666 1765 aa17.13■□□□□ 0.33
SMN1-202ENST00000380707 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SMN1-202ENST00000380707 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
SMN1-202ENST00000380707 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
SMN1-202ENST00000380707 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
SMN1-202ENST00000380707 NWD2Q9ULI1 1742 aa17.12■□□□□ 0.33
SMN1-202ENST00000380707 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
SMN1-202ENST00000380707 ANP32CO43423 234 aa17.11■□□□□ 0.33
SMN1-202ENST00000380707 EVA1CP58658 441 aa17.11■□□□□ 0.33
SMN1-202ENST00000380707 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
SMN1-202ENST00000380707 INSRP06213 1382 aa17.11■□□□□ 0.33
SMN1-202ENST00000380707 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
SMN1-202ENST00000380707 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
SMN1-202ENST00000380707 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SMN1-202ENST00000380707 NRAPQ86VF7 1730 aa17.1■□□□□ 0.33
SMN1-202ENST00000380707 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
SMN1-202ENST00000380707 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
SMN1-202ENST00000380707 CDK12Q9NYV4 1490 aaPredicted RBP17.09■□□□□ 0.33
SMN1-202ENST00000380707 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
SMN1-202ENST00000380707 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
SMN1-202ENST00000380707 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
SMN1-202ENST00000380707 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
SMN1-202ENST00000380707 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
SMN1-202ENST00000380707 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
SMN1-202ENST00000380707 VPS72Q15906 364 aa17.06■□□□□ 0.32
SMN1-202ENST00000380707 ATRNO75882 1429 aa17.06■□□□□ 0.32
SMN1-202ENST00000380707 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
SMN1-202ENST00000380707 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
SMN1-202ENST00000380707 TRPC5Q9UL62 973 aaPredicted RBP17.06■□□□□ 0.32
SMN1-202ENST00000380707 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
SMN1-202ENST00000380707 IL13P35225 146 aa17.05■□□□□ 0.32
SMN1-202ENST00000380707 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
SMN1-202ENST00000380707 CRB1P82279 1406 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 USP35Q9P2H5 1018 aa17.04■□□□□ 0.32
SMN1-202ENST00000380707 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
SMN1-202ENST00000380707 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
SMN1-202ENST00000380707 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
SMN1-202ENST00000380707 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
SMN1-202ENST00000380707 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
SMN1-202ENST00000380707 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
SMN1-202ENST00000380707 EYA1Q99502 592 aa17.02■□□□□ 0.32
SMN1-202ENST00000380707 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
SMN1-202ENST00000380707 RGPD2P0DJD1 1756 aa17.01■□□□□ 0.31
SMN1-202ENST00000380707 CCDC184Q52MB2 194 aa17.01■□□□□ 0.31
SMN1-202ENST00000380707 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
SMN1-202ENST00000380707 GLI3P10071 1580 aa16.99■□□□□ 0.31
SMN1-202ENST00000380707 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
SMN1-202ENST00000380707 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
SMN1-202ENST00000380707 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SMN1-202ENST00000380707 MIER1Q8N108 512 aa16.98■□□□□ 0.31
SMN1-202ENST00000380707 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
SMN1-202ENST00000380707 RXRBP28702 533 aa16.97■□□□□ 0.31
SMN1-202ENST00000380707 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SMN1-202ENST00000380707 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
SMN1-202ENST00000380707 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
SMN1-202ENST00000380707 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
SMN1-202ENST00000380707 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
SMN1-202ENST00000380707 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
SMN1-202ENST00000380707 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.3
SMN1-202ENST00000380707 NUDCQ9Y266 331 aa16.96■□□□□ 0.3
SMN1-202ENST00000380707 EP400Q96L91 3159 aa16.96■□□□□ 0.3
SMN1-202ENST00000380707 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
SMN1-202ENST00000380707 HMOX1P09601 288 aa16.95■□□□□ 0.3
SMN1-202ENST00000380707 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
SMN1-202ENST00000380707 KDRP35968 1356 aa16.93■□□□□ 0.3
SMN1-202ENST00000380707 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
SMN1-202ENST00000380707 IL2RBP14784 551 aa16.93■□□□□ 0.3
SMN1-202ENST00000380707 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMN1-202ENST00000380707 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
SMN1-202ENST00000380707 MEGF6O75095 1541 aa16.92■□□□□ 0.3
SMN1-202ENST00000380707 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
SMN1-202ENST00000380707 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
SMN1-202ENST00000380707 A0A0G2JS52 829 aa16.91■□□□□ 0.3
SMN1-202ENST00000380707 MYT1Q01538 1121 aa16.91■□□□□ 0.3
SMN1-202ENST00000380707 CDCA7Q9BWT1 371 aaPredicted RBP16.91■□□□□ 0.3
SMN1-202ENST00000380707 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms