RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 PRDM16Q9HAZ2 1276 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 SHPRHQ149N8 1683 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 RNF17Q9BXT8 1623 aaKnown RBP8.04□□□□□ -1.12
RIPK1-202ENST00000380409 PRDM15P57071 1507 aaPredicted RBP8.04□□□□□ -1.12
RIPK1-202ENST00000380409 ATP10AO60312 1499 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 KIF3BO15066 747 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 CYP2C19P33261 490 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
RIPK1-202ENST00000380409 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 NCAPGQ9BPX3 1015 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 NOLC1Q14978 699 aaKnown RBP eCLIP8.04□□□□□ -1.12
RIPK1-202ENST00000380409 KIF16BQ96L93 1317 aa8.04□□□□□ -1.12
RIPK1-202ENST00000380409 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
RIPK1-202ENST00000380409 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
RIPK1-202ENST00000380409 KIF18AQ8NI77 898 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 DHX16O60231 1041 aaKnown RBP8.03□□□□□ -1.12
RIPK1-202ENST00000380409 PHF14O94880 888 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 LRSAM1Q6UWE0 723 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 ZNF446Q9NWS9 450 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 ROCK1Q13464 1354 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 PATL2C9JE40 543 aaKnown RBP8.03□□□□□ -1.12
RIPK1-202ENST00000380409 SLFN5Q08AF3 891 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 SPAG9O60271 1321 aaKnown RBP8.03□□□□□ -1.12
RIPK1-202ENST00000380409 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 NBPF20Q3BBV1 942 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 BRMS1Q9HCU9 246 aa8.03□□□□□ -1.12
RIPK1-202ENST00000380409 CLSTN1O94985 981 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 GPT2Q8TD30 523 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 KDM4FA0A1W2PPD8 638 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 RIOK3O14730 519 aaKnown RBP8.02□□□□□ -1.13
RIPK1-202ENST00000380409 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 STK26Q9P289 416 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 MYO5CQ9NQX4 1742 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 HSCBQ8IWL3 235 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 MYCBPQ99417 103 aaPredicted RBP8.02□□□□□ -1.13
RIPK1-202ENST00000380409 PLCD4Q9BRC7 762 aa8.02□□□□□ -1.13
RIPK1-202ENST00000380409 ARHGAP5Q13017 1502 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 SSFA2P28290 1259 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 TUBGCP6Q96RT7 1819 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 CD2BP2O95400 341 aaKnown RBP8.01□□□□□ -1.13
RIPK1-202ENST00000380409 GUCY2CP25092 1073 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 TMF1P82094 1093 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 PSMD1Q99460 953 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 REC8O95072 547 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 PTMAP06454 111 aaKnown RBP8.01□□□□□ -1.13
RIPK1-202ENST00000380409 CEP83Q9Y592 693 aa8.01□□□□□ -1.13
RIPK1-202ENST00000380409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
RIPK1-202ENST00000380409 ICE2Q659A1 982 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 EP400NLQ6ZTU2 488 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 ERBB3P21860 1342 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 MCCP23508 829 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 CTR9Q6PD62 1173 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 SMC4Q9NTJ3 1288 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 FANCAO15360 1455 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 GSCP56915 257 aaPredicted RBP8□□□□□ -1.13
RIPK1-202ENST00000380409 NECTIN2Q92692 538 aa8□□□□□ -1.13
RIPK1-202ENST00000380409 ZCCHC11Q5TAX3 1644 aaKnown RBP8□□□□□ -1.13
RIPK1-202ENST00000380409 CCDC172P0C7W6 258 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 HNRNPH2P55795 449 aaKnown RBP7.99□□□□□ -1.13
RIPK1-202ENST00000380409 POLKQ9UBT6 870 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 CCDC189A1A4V9 331 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.99□□□□□ -1.13
RIPK1-202ENST00000380409 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 PDZRN3Q9UPQ7 1066 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 DDX49Q9Y6V7 483 aaKnown RBP7.99□□□□□ -1.13
RIPK1-202ENST00000380409 KANK1Q14678 1352 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 IRF6O14896 467 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 KIAA1524Q8TCG1 905 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 RAPGEF6Q8TEU7 1601 aa7.99□□□□□ -1.13
RIPK1-202ENST00000380409 ANKRD36BQ8N2N9 1353 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 IQSEC2Q5JU85 1478 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 SATB1Q01826 763 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 KRT222Q8N1A0 295 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 DONSONQ9NYP3 566 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 RSPH14Q9UHP6 348 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 PIK3C2GO75747 1445 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 CAVIN1Q6NZI2 390 aaKnown RBP7.98□□□□□ -1.13
RIPK1-202ENST00000380409 KCNF1Q9H3M0 494 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
RIPK1-202ENST00000380409 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 ADGRL1O94910 1474 aa7.98□□□□□ -1.13
RIPK1-202ENST00000380409 CDC42BPAQ5VT25 1732 aa7.97□□□□□ -1.13
RIPK1-202ENST00000380409 RBM6P78332 1123 aaKnown RBP7.97□□□□□ -1.13
RIPK1-202ENST00000380409 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
RIPK1-202ENST00000380409 IQGAP1P46940 1657 aa7.97□□□□□ -1.13
RIPK1-202ENST00000380409 APPP05067 770 aa7.97□□□□□ -1.13
RIPK1-202ENST00000380409 LMOD3Q0VAK6 560 aa7.97□□□□□ -1.13
RIPK1-202ENST00000380409 BCAR3O75815 825 aa7.96□□□□□ -1.13
RIPK1-202ENST00000380409 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.13
RIPK1-202ENST00000380409 PMFBP1Q8TBY8 1022 aa7.96□□□□□ -1.13
RIPK1-202ENST00000380409 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.13
RIPK1-202ENST00000380409 RAI14Q9P0K7 980 aa7.96□□□□□ -1.13
RIPK1-202ENST00000380409 TCHHQ07283 1943 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms