RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KCNH5Q8NCM2 988 aa33.01■■■□□ 2.87
U2AF1-202ENST00000380276 AXIN2Q9Y2T1 843 aa33.01■■■□□ 2.87
U2AF1-202ENST00000380276 COL18A1P39060 1754 aa33.01■■■□□ 2.87
U2AF1-202ENST00000380276 WDR17Q8IZU2 1322 aa33.01■■■□□ 2.87
U2AF1-202ENST00000380276 TTC21AQ8NDW8 1320 aa32.98■■■□□ 2.87
U2AF1-202ENST00000380276 WNK3Q9BYP7 1800 aa32.98■■■□□ 2.87
U2AF1-202ENST00000380276 KTN1Q86UP2 1357 aaKnown RBP32.97■■■□□ 2.87
U2AF1-202ENST00000380276 PEAK1Q9H792 1746 aa32.97■■■□□ 2.87
U2AF1-202ENST00000380276 ARHGEF25Q86VW2 580 aa32.96■■■□□ 2.87
U2AF1-202ENST00000380276 RGPD5Q99666 1765 aa32.96■■■□□ 2.87
U2AF1-202ENST00000380276 PPP1R1BQ9UD71 204 aaPredicted RBP32.94■■■□□ 2.86
U2AF1-202ENST00000380276 SBF2Q86WG5 1849 aa32.93■■■□□ 2.86
U2AF1-202ENST00000380276 CDCA7Q9BWT1 371 aaPredicted RBP32.92■■■□□ 2.86
U2AF1-202ENST00000380276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.91■■■□□ 2.86
U2AF1-202ENST00000380276 CARD10Q9BWT7 1032 aa32.9■■■□□ 2.86
U2AF1-202ENST00000380276 SPON1Q9HCB6 807 aa32.9■■■□□ 2.86
U2AF1-202ENST00000380276 MARCH10Q8NA82 808 aaPredicted RBP32.89■■■□□ 2.86
U2AF1-202ENST00000380276 BCL11BQ9C0K0 894 aaPredicted RBP32.89■■■□□ 2.86
U2AF1-202ENST00000380276 PTF1AQ7RTS3 328 aa32.88■■■□□ 2.85
U2AF1-202ENST00000380276 CARD11Q9BXL7 1154 aa32.88■■■□□ 2.85
U2AF1-202ENST00000380276 RGPD3A6NKT7 1758 aaPredicted RBP32.88■■■□□ 2.85
U2AF1-202ENST00000380276 RGPD4Q7Z3J3 1758 aa32.88■■■□□ 2.85
U2AF1-202ENST00000380276 NFAT5O94916 1531 aa32.87■■■□□ 2.85
U2AF1-202ENST00000380276 PLSCR1O15162 318 aa32.87■■■□□ 2.85
U2AF1-202ENST00000380276 TMC1Q8TDI8 760 aa32.87■■■□□ 2.85
U2AF1-202ENST00000380276 MON2Q7Z3U7 1717 aa32.87■■■□□ 2.85
U2AF1-202ENST00000380276 EXOC5O00471 708 aa32.85■■■□□ 2.85
U2AF1-202ENST00000380276 KCNQ2O43526 872 aa32.85■■■□□ 2.85
U2AF1-202ENST00000380276 CCDC7Q96M83 1385 aa32.83■■■□□ 2.85
U2AF1-202ENST00000380276 ANO8Q9HCE9 1232 aaPredicted RBP32.82■■■□□ 2.84
U2AF1-202ENST00000380276 NME9Q86XW9 330 aa32.81■■■□□ 2.84
U2AF1-202ENST00000380276 HDGFL2Q7Z4V5 671 aaPredicted RBP32.8■■■□□ 2.84
U2AF1-202ENST00000380276 SBNO2Q9Y2G9 1366 aa32.79■■■□□ 2.84
U2AF1-202ENST00000380276 ABCC6O95255 1503 aa32.78■■■□□ 2.84
U2AF1-202ENST00000380276 NLRP2Q9NX02 1062 aa32.78■■■□□ 2.84
U2AF1-202ENST00000380276 BCL9O00512 1426 aa32.77■■■□□ 2.84
U2AF1-202ENST00000380276 TNS2Q63HR2 1409 aa32.77■■■□□ 2.84
U2AF1-202ENST00000380276 USP31Q70CQ4 1352 aa32.75■■■□□ 2.83
U2AF1-202ENST00000380276 TONSLQ96HA7 1378 aa32.75■■■□□ 2.83
U2AF1-202ENST00000380276 DCAF8L1A6NGE4 600 aa32.75■■■□□ 2.83
U2AF1-202ENST00000380276 LTN1O94822 1766 aa32.74■■■□□ 2.83
U2AF1-202ENST00000380276 SLC12A5Q9H2X9 1139 aa32.74■■■□□ 2.83
U2AF1-202ENST00000380276 CD163L1Q9NR16 1453 aa32.74■■■□□ 2.83
U2AF1-202ENST00000380276 PROM2Q8N271 834 aa32.73■■■□□ 2.83
U2AF1-202ENST00000380276 STK32BQ9NY57 414 aa32.73■■■□□ 2.83
U2AF1-202ENST00000380276 TXNRD1Q16881 649 aa32.72■■■□□ 2.83
U2AF1-202ENST00000380276 ACSBG1Q96GR2 724 aa32.72■■■□□ 2.83
U2AF1-202ENST00000380276 ERBB3P21860 1342 aa32.72■■■□□ 2.83
U2AF1-202ENST00000380276 YY1P25490 414 aa32.71■■■□□ 2.83
U2AF1-202ENST00000380276 USP54Q70EL1 1684 aa32.71■■■□□ 2.83
U2AF1-202ENST00000380276 NINLQ9Y2I6 1382 aa32.7■■■□□ 2.83
U2AF1-202ENST00000380276 CASZ1Q86V15 1759 aa32.7■■■□□ 2.83
U2AF1-202ENST00000380276 ZBTB7AO95365 584 aa32.7■■■□□ 2.83
U2AF1-202ENST00000380276 PDGFDQ9GZP0 370 aaPredicted RBP32.7■■■□□ 2.83
U2AF1-202ENST00000380276 TERF2IPQ9NYB0 399 aa32.7■■■□□ 2.83
U2AF1-202ENST00000380276 ANKRD24Q8TF21 1146 aa32.69■■■□□ 2.82
U2AF1-202ENST00000380276 EDC4Q6P2E9 1401 aaKnown RBP32.68■■■□□ 2.82
U2AF1-202ENST00000380276 IL2RBP14784 551 aa32.68■■■□□ 2.82
U2AF1-202ENST00000380276 NHSQ6T4R5 1651 aa32.66■■■□□ 2.82
U2AF1-202ENST00000380276 A0A1W2PP64 1363 aa32.66■■■□□ 2.82
U2AF1-202ENST00000380276 ATF5Q9Y2D1 282 aaPredicted RBP32.65■■■□□ 2.82
U2AF1-202ENST00000380276 SLC15A2Q16348 729 aa32.63■■■□□ 2.81
U2AF1-202ENST00000380276 LTV1Q96GA3 475 aaPredicted RBP32.62■■■□□ 2.81
U2AF1-202ENST00000380276 MYOM1P52179 1685 aa32.59■■■□□ 2.81
U2AF1-202ENST00000380276 BTAF1O14981 1849 aa32.55■■■□□ 2.8
U2AF1-202ENST00000380276 DDX54Q8TDD1 881 aaKnown RBP32.54■■■□□ 2.8
U2AF1-202ENST00000380276 IP6K1Q92551 441 aa32.54■■■□□ 2.8
U2AF1-202ENST00000380276 PUS7Q96PZ0 661 aaKnown RBP32.54■■■□□ 2.8
U2AF1-202ENST00000380276 KAT6BQ8WYB5 2073 aa32.54■■■□□ 2.8
U2AF1-202ENST00000380276 ST20-MTHFSA0A0A6YYL1 179 aa32.53■■■□□ 2.8
U2AF1-202ENST00000380276 PTGER2P43116 358 aa32.53■■■□□ 2.8
U2AF1-202ENST00000380276 COG3Q96JB2 828 aa32.53■■■□□ 2.8
U2AF1-202ENST00000380276 MTFR1LQ9H019 292 aa32.51■■■□□ 2.79
U2AF1-202ENST00000380276 FAM208AQ9UK61 1670 aaKnown RBP32.5■■■□□ 2.79
U2AF1-202ENST00000380276 AMPHP49418 695 aa32.5■■■□□ 2.79
U2AF1-202ENST00000380276 TESK2Q96S53 571 aa32.48■■■□□ 2.79
U2AF1-202ENST00000380276 FHDC1Q9C0D6 1143 aaPredicted RBP32.47■■■□□ 2.79
U2AF1-202ENST00000380276 MAP3K19Q56UN5 1328 aa32.47■■■□□ 2.79
U2AF1-202ENST00000380276 SYTL4Q96C24 671 aaPredicted RBP32.46■■■□□ 2.79
U2AF1-202ENST00000380276 PAPPAQ13219 1627 aa32.46■■■□□ 2.79
U2AF1-202ENST00000380276 FBLN1P23142 703 aa32.45■■■□□ 2.79
U2AF1-202ENST00000380276 HOXC9P31274 260 aa32.44■■■□□ 2.78
U2AF1-202ENST00000380276 SLC24A1O60721 1099 aa32.43■■■□□ 2.78
U2AF1-202ENST00000380276 ZNF827Q17R98 1081 aa32.43■■■□□ 2.78
U2AF1-202ENST00000380276 SYT17Q9BSW7 474 aa32.42■■■□□ 2.78
U2AF1-202ENST00000380276 LRRC4BQ9NT99 713 aa32.42■■■□□ 2.78
U2AF1-202ENST00000380276 ARXQ96QS3 562 aa32.4■■■□□ 2.78
U2AF1-202ENST00000380276 ANKRD36BQ8N2N9 1353 aa32.4■■■□□ 2.78
U2AF1-202ENST00000380276 RGPD2P0DJD1 1756 aa32.39■■■□□ 2.78
U2AF1-202ENST00000380276 DOT1LQ8TEK3 1739 aa32.38■■■□□ 2.77
U2AF1-202ENST00000380276 PRIM1P49642 420 aaKnown RBP32.37■■■□□ 2.77
U2AF1-202ENST00000380276 RRS1Q15050 365 aaKnown RBP32.37■■■□□ 2.77
U2AF1-202ENST00000380276 SGIP1Q9BQI5 828 aa32.37■■■□□ 2.77
U2AF1-202ENST00000380276 TMF1P82094 1093 aa32.36■■■□□ 2.77
U2AF1-202ENST00000380276 SLC27A3Q5K4L6 730 aa32.36■■■□□ 2.77
U2AF1-202ENST00000380276 KLHL34Q8N239 644 aa32.36■■■□□ 2.77
U2AF1-202ENST00000380276 ZCRB1Q8TBF4 217 aaKnown RBP32.36■■■□□ 2.77
U2AF1-202ENST00000380276 GGNBP2Q9H3C7 697 aa32.36■■■□□ 2.77
U2AF1-202ENST00000380276 KCNQ4P56696 695 aa32.34■■■□□ 2.77
U2AF1-202ENST00000380276 MEGF6O75095 1541 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms