RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 ANKRD45Q5TZF3 282 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.58
CTPS2-202ENST00000380241 SYNMO15061 1565 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 RIMBP3CA6NJZ7 1639 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 RIMBP3BA6NNM3 1639 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 RIMBP3Q9UFD9 1639 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 JPH4Q96JJ6 628 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 KANK1Q14678 1352 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 PTPRGP23470 1445 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
CTPS2-202ENST00000380241 KRT222Q8N1A0 295 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 NCBP1Q09161 790 aaKnown RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 TRIM34Q9BYJ4 488 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 ZBTB40Q9NUA8 1239 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 POLR3AO14802 1390 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 ZGPATQ8N5A5 531 aaKnown RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 KIAA1524Q8TCG1 905 aa11.44□□□□□ -0.58
CTPS2-202ENST00000380241 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 PHF23Q9BUL5 403 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 MORC2Q9Y6X9 1032 aaPredicted RBP11.44□□□□□ -0.58
CTPS2-202ENST00000380241 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 ZDHHC9Q9Y397 364 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 ERICH4A6NGS2 130 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 FAM193AP78312 1265 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 FAM43BQ6ZT52 329 aaPredicted RBP11.43□□□□□ -0.58
CTPS2-202ENST00000380241 TMEM57Q8N5G2 664 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
CTPS2-202ENST00000380241 TULP2O00295 520 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 SOX12O15370 315 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 IPO8O15397 1037 aaKnown RBP11.42□□□□□ -0.58
CTPS2-202ENST00000380241 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 CREBRFQ8IUR6 639 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 GPATCH8Q9UKJ3 1502 aaKnown RBP11.42□□□□□ -0.58
CTPS2-202ENST00000380241 APPP05067 770 aa11.42□□□□□ -0.58
CTPS2-202ENST00000380241 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
CTPS2-202ENST00000380241 CHAMP1Q96JM3 812 aa11.41□□□□□ -0.58
CTPS2-202ENST00000380241 TROQ12816 1431 aaPredicted RBP11.41□□□□□ -0.58
CTPS2-202ENST00000380241 TNNT3P45378 269 aaPredicted RBP11.41□□□□□ -0.58
CTPS2-202ENST00000380241 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
CTPS2-202ENST00000380241 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
CTPS2-202ENST00000380241 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
CTPS2-202ENST00000380241 CAPN2P17655 700 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 KIF18AQ8NI77 898 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 SMTNL1A8MU46 457 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
CTPS2-202ENST00000380241 KDM4AO75164 1064 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 PYCARDQ9ULZ3 195 aa11.4□□□□□ -0.58
CTPS2-202ENST00000380241 SHANK2Q9UPX8 1470 aa11.4□□□□□ -0.59
CTPS2-202ENST00000380241 IQGAP2Q13576 1575 aa11.39□□□□□ -0.59
CTPS2-202ENST00000380241 CERS3Q8IU89 383 aa11.39□□□□□ -0.59
CTPS2-202ENST00000380241 PRG4Q92954 1404 aaPredicted RBP11.39□□□□□ -0.59
CTPS2-202ENST00000380241 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
CTPS2-202ENST00000380241 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
CTPS2-202ENST00000380241 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
CTPS2-202ENST00000380241 HCLS1P14317 486 aaPredicted RBP11.38□□□□□ -0.59
CTPS2-202ENST00000380241 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
CTPS2-202ENST00000380241 CCDC112Q8NEF3 446 aa11.38□□□□□ -0.59
CTPS2-202ENST00000380241 USP26Q9BXU7 913 aa11.38□□□□□ -0.59
CTPS2-202ENST00000380241 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
CTPS2-202ENST00000380241 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
CTPS2-202ENST00000380241 ZNF397Q8NF99 534 aaPredicted RBP11.38□□□□□ -0.59
CTPS2-202ENST00000380241 BRD1O95696 1058 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 FAM69CQ0P6D2 419 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
CTPS2-202ENST00000380241 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 NUP153P49790 1475 aaKnown RBP11.37□□□□□ -0.59
CTPS2-202ENST00000380241 IQSEC2Q5JU85 1478 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 CHD1O14646 1710 aa11.37□□□□□ -0.59
CTPS2-202ENST00000380241 OS9Q13438 667 aaPredicted RBP11.36□□□□□ -0.59
CTPS2-202ENST00000380241 EFCC1Q9HA90 598 aa11.36□□□□□ -0.59
CTPS2-202ENST00000380241 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
CTPS2-202ENST00000380241 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
CTPS2-202ENST00000380241 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
CTPS2-202ENST00000380241 FEZ2Q9UHY8 353 aaPredicted RBP11.35□□□□□ -0.59
CTPS2-202ENST00000380241 TNNT1P13805 278 aa11.35□□□□□ -0.59
CTPS2-202ENST00000380241 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
CTPS2-202ENST00000380241 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
CTPS2-202ENST00000380241 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
CTPS2-202ENST00000380241 REREQ9P2R6 1566 aa11.35□□□□□ -0.59
CTPS2-202ENST00000380241 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
CTPS2-202ENST00000380241 REC8O95072 547 aa11.34□□□□□ -0.59
CTPS2-202ENST00000380241 MCM2P49736 904 aa11.34□□□□□ -0.59
CTPS2-202ENST00000380241 YY1AP1Q9H869 796 aa11.34□□□□□ -0.59
CTPS2-202ENST00000380241 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
CTPS2-202ENST00000380241 GADD45BO75293 160 aaPredicted RBP11.34□□□□□ -0.59
CTPS2-202ENST00000380241 MX1P20591 662 aa11.34□□□□□ -0.59
CTPS2-202ENST00000380241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■□□□ 12.6
CTPS2-202ENST00000380241 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms