RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 DDB1Q16531 1140 aa28.83■■■□□ 2.21
CDKN2A-202ENST00000380150 KTN1Q86UP2 1357 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-202ENST00000380150 OVOS2A0A0G2JMS6 1433 aa28.83■■■□□ 2.21
CDKN2A-202ENST00000380150 OVOS2A0A0J9YW53 1432 aa28.83■■■□□ 2.21
CDKN2A-202ENST00000380150 OVOS2Q6IE36 1432 aa28.83■■■□□ 2.21
CDKN2A-202ENST00000380150 NFAT5O94916 1531 aa28.82■■■□□ 2.2
CDKN2A-202ENST00000380150 WNK3Q9BYP7 1800 aa28.82■■■□□ 2.2
CDKN2A-202ENST00000380150 TTC21AQ8NDW8 1320 aa28.81■■■□□ 2.2
CDKN2A-202ENST00000380150 SBF2Q86WG5 1849 aa28.79■■■□□ 2.2
CDKN2A-202ENST00000380150 MARCH10Q8NA82 808 aaPredicted RBP28.79■■■□□ 2.2
CDKN2A-202ENST00000380150 KCNH5Q8NCM2 988 aa28.79■■■□□ 2.2
CDKN2A-202ENST00000380150 MON2Q7Z3U7 1717 aa28.79■■■□□ 2.2
CDKN2A-202ENST00000380150 CD163L1Q9NR16 1453 aa28.78■■■□□ 2.2
CDKN2A-202ENST00000380150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.78■■■□□ 2.2
CDKN2A-202ENST00000380150 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
CDKN2A-202ENST00000380150 CSB-PGBD3P0DP91 1061 aa28.76■■■□□ 2.19
CDKN2A-202ENST00000380150 NBPF14Q5TI25 921 aa28.76■■■□□ 2.19
CDKN2A-202ENST00000380150 SBNO2Q9Y2G9 1366 aa28.75■■■□□ 2.19
CDKN2A-202ENST00000380150 NME9Q86XW9 330 aa28.75■■■□□ 2.19
CDKN2A-202ENST00000380150 CARD10Q9BWT7 1032 aa28.75■■■□□ 2.19
CDKN2A-202ENST00000380150 C11orf95C9JLR9 678 aaPredicted RBP28.72■■■□□ 2.19
CDKN2A-202ENST00000380150 TMC1Q8TDI8 760 aa28.71■■■□□ 2.19
CDKN2A-202ENST00000380150 BCL11BQ9C0K0 894 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-202ENST00000380150 SLC12A5Q9H2X9 1139 aa28.71■■■□□ 2.19
CDKN2A-202ENST00000380150 ANO8Q9HCE9 1232 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-202ENST00000380150 PLSCR1O15162 318 aa28.7■■■□□ 2.18
CDKN2A-202ENST00000380150 USP31Q70CQ4 1352 aa28.7■■■□□ 2.18
CDKN2A-202ENST00000380150 PROM2Q8N271 834 aa28.69■■■□□ 2.18
CDKN2A-202ENST00000380150 CDCA7Q9BWT1 371 aaPredicted RBP28.69■■■□□ 2.18
CDKN2A-202ENST00000380150 RGPD3A6NKT7 1758 aaPredicted RBP28.68■■■□□ 2.18
CDKN2A-202ENST00000380150 RGPD4Q7Z3J3 1758 aa28.68■■■□□ 2.18
CDKN2A-202ENST00000380150 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
CDKN2A-202ENST00000380150 BCL9O00512 1426 aa28.66■■■□□ 2.18
CDKN2A-202ENST00000380150 TONSLQ96HA7 1378 aa28.65■■■□□ 2.18
CDKN2A-202ENST00000380150 EXOC5O00471 708 aa28.65■■■□□ 2.18
CDKN2A-202ENST00000380150 PDGFDQ9GZP0 370 aaPredicted RBP28.65■■■□□ 2.18
CDKN2A-202ENST00000380150 ABCC6O95255 1503 aa28.64■■■□□ 2.18
CDKN2A-202ENST00000380150 CCDC7Q96M83 1385 aa28.64■■■□□ 2.18
CDKN2A-202ENST00000380150 A0A1W2PP64 1363 aa28.63■■■□□ 2.17
CDKN2A-202ENST00000380150 LTN1O94822 1766 aa28.63■■■□□ 2.17
CDKN2A-202ENST00000380150 KCNQ2O43526 872 aa28.63■■■□□ 2.17
CDKN2A-202ENST00000380150 ERBB3P21860 1342 aa28.63■■■□□ 2.17
CDKN2A-202ENST00000380150 TNS2Q63HR2 1409 aa28.62■■■□□ 2.17
CDKN2A-202ENST00000380150 HDGFL2Q7Z4V5 671 aaPredicted RBP28.62■■■□□ 2.17
CDKN2A-202ENST00000380150 SPON1Q9HCB6 807 aa28.61■■■□□ 2.17
CDKN2A-202ENST00000380150 NLRP2Q9NX02 1062 aa28.61■■■□□ 2.17
CDKN2A-202ENST00000380150 EDC4Q6P2E9 1401 aaKnown RBP28.6■■■□□ 2.17
CDKN2A-202ENST00000380150 CASZ1Q86V15 1759 aa28.59■■■□□ 2.17
CDKN2A-202ENST00000380150 ANKRD24Q8TF21 1146 aa28.58■■■□□ 2.17
CDKN2A-202ENST00000380150 TXNRD1Q16881 649 aa28.57■■■□□ 2.16
CDKN2A-202ENST00000380150 ACSBG1Q96GR2 724 aa28.57■■■□□ 2.16
CDKN2A-202ENST00000380150 TESK2Q96S53 571 aa28.57■■■□□ 2.16
CDKN2A-202ENST00000380150 PPP1R1BQ9UD71 204 aaPredicted RBP28.56■■■□□ 2.16
CDKN2A-202ENST00000380150 ST20-MTHFSA0A0A6YYL1 179 aa28.55■■■□□ 2.16
CDKN2A-202ENST00000380150 TERF2IPQ9NYB0 399 aa28.55■■■□□ 2.16
CDKN2A-202ENST00000380150 IL2RBP14784 551 aa28.53■■■□□ 2.16
CDKN2A-202ENST00000380150 NHSQ6T4R5 1651 aa28.53■■■□□ 2.16
CDKN2A-202ENST00000380150 ZBTB7AO95365 584 aa28.52■■■□□ 2.16
CDKN2A-202ENST00000380150 FBLN1P23142 703 aa28.52■■■□□ 2.16
CDKN2A-202ENST00000380150 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
CDKN2A-202ENST00000380150 LTV1Q96GA3 475 aaPredicted RBP28.49■■■□□ 2.15
CDKN2A-202ENST00000380150 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
CDKN2A-202ENST00000380150 IP6K1Q92551 441 aa28.47■■■□□ 2.15
CDKN2A-202ENST00000380150 STK32BQ9NY57 414 aa28.47■■■□□ 2.15
CDKN2A-202ENST00000380150 ATF5Q9Y2D1 282 aaPredicted RBP28.47■■■□□ 2.15
CDKN2A-202ENST00000380150 PTGER2P43116 358 aa28.46■■■□□ 2.15
CDKN2A-202ENST00000380150 NINLQ9Y2I6 1382 aa28.45■■■□□ 2.14
CDKN2A-202ENST00000380150 MYOM1P52179 1685 aa28.45■■■□□ 2.14
CDKN2A-202ENST00000380150 BTAF1O14981 1849 aa28.44■■■□□ 2.14
CDKN2A-202ENST00000380150 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
CDKN2A-202ENST00000380150 TRIM26Q12899 539 aaPredicted RBP28.43■■■□□ 2.14
CDKN2A-202ENST00000380150 PAPPAQ13219 1627 aa28.41■■■□□ 2.14
CDKN2A-202ENST00000380150 DDX54Q8TDD1 881 aaKnown RBP28.41■■■□□ 2.14
CDKN2A-202ENST00000380150 COG3Q96JB2 828 aa28.41■■■□□ 2.14
CDKN2A-202ENST00000380150 YY1P25490 414 aa28.4■■■□□ 2.14
CDKN2A-202ENST00000380150 HOXC9P31274 260 aa28.4■■■□□ 2.14
CDKN2A-202ENST00000380150 LRRC4BQ9NT99 713 aa28.4■■■□□ 2.14
CDKN2A-202ENST00000380150 RGPD2P0DJD1 1756 aa28.38■■■□□ 2.13
CDKN2A-202ENST00000380150 ZNF827Q17R98 1081 aa28.38■■■□□ 2.13
CDKN2A-202ENST00000380150 FAM208AQ9UK61 1670 aaKnown RBP28.38■■■□□ 2.13
CDKN2A-202ENST00000380150 ANKRD36BQ8N2N9 1353 aa28.37■■■□□ 2.13
CDKN2A-202ENST00000380150 AMPHP49418 695 aa28.35■■■□□ 2.13
CDKN2A-202ENST00000380150 RRS1Q15050 365 aaKnown RBP28.35■■■□□ 2.13
CDKN2A-202ENST00000380150 GGNBP2Q9H3C7 697 aa28.35■■■□□ 2.13
CDKN2A-202ENST00000380150 SGIP1Q9BQI5 828 aa28.34■■■□□ 2.13
CDKN2A-202ENST00000380150 USP47Q96K76 1375 aa28.34■■■□□ 2.13
CDKN2A-202ENST00000380150 FYB1O15117 783 aa28.33■■■□□ 2.13
CDKN2A-202ENST00000380150 MTFR1LQ9H019 292 aa28.33■■■□□ 2.13
CDKN2A-202ENST00000380150 MEGF6O75095 1541 aa28.33■■■□□ 2.13
CDKN2A-202ENST00000380150 KCNQ4P56696 695 aa28.32■■■□□ 2.12
CDKN2A-202ENST00000380150 FHDC1Q9C0D6 1143 aaPredicted RBP28.32■■■□□ 2.12
CDKN2A-202ENST00000380150 SHANK3Q9BYB0 1731 aa28.32■■■□□ 2.12
CDKN2A-202ENST00000380150 KAT6BQ8WYB5 2073 aa28.31■■■□□ 2.12
CDKN2A-202ENST00000380150 USHBP1Q8N6Y0 703 aa28.3■■■□□ 2.12
CDKN2A-202ENST00000380150 UTRNP46939 3433 aa28.3■■■□□ 2.12
CDKN2A-202ENST00000380150 PRIM1P49642 420 aaKnown RBP28.29■■■□□ 2.12
CDKN2A-202ENST00000380150 TMF1P82094 1093 aa28.29■■■□□ 2.12
CDKN2A-202ENST00000380150 NBPF6Q5VWK0 638 aa28.29■■■□□ 2.12
CDKN2A-202ENST00000380150 SYTL4Q96C24 671 aaPredicted RBP28.29■■■□□ 2.12
CDKN2A-202ENST00000380150 NBPF4Q96M43 638 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms