RNA–Protein interactions for RNA: ENST00000380103.4

SMAGP-201, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 1 (best)

Gene SMAGP, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-201ENST00000380103 GLI3P10071 1580 aa9.47□□□□□ -0.89
SMAGP-201ENST00000380103 MKRN4PQ13434 485 aaPredicted RBP9.47□□□□□ -0.89
SMAGP-201ENST00000380103 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
SMAGP-201ENST00000380103 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
SMAGP-201ENST00000380103 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
SMAGP-201ENST00000380103 SPATA31A1Q5TZJ5 1347 aa9.47□□□□□ -0.89
SMAGP-201ENST00000380103 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SMAGP-201ENST00000380103 BARGINQ6ZT62 677 aa9.46□□□□□ -0.9
SMAGP-201ENST00000380103 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
SMAGP-201ENST00000380103 TESK2Q96S53 571 aa9.46□□□□□ -0.9
SMAGP-201ENST00000380103 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.9
SMAGP-201ENST00000380103 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
SMAGP-201ENST00000380103 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
SMAGP-201ENST00000380103 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
SMAGP-201ENST00000380103 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
SMAGP-201ENST00000380103 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
SMAGP-201ENST00000380103 BLMP54132 1417 aaPredicted RBP9.45□□□□□ -0.9
SMAGP-201ENST00000380103 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
SMAGP-201ENST00000380103 ARHGEF25Q86VW2 580 aa9.44□□□□□ -0.9
SMAGP-201ENST00000380103 TCP11L2Q8N4U5 519 aa9.44□□□□□ -0.9
SMAGP-201ENST00000380103 USP47Q96K76 1375 aa9.44□□□□□ -0.9
SMAGP-201ENST00000380103 SLIT3O75094 1523 aa9.44□□□□□ -0.9
SMAGP-201ENST00000380103 PHRF1Q9P1Y6 1649 aaKnown RBP9.44□□□□□ -0.9
SMAGP-201ENST00000380103 NRAPQ86VF7 1730 aa9.43□□□□□ -0.9
SMAGP-201ENST00000380103 NRKQ7Z2Y5 1582 aa9.43□□□□□ -0.9
SMAGP-201ENST00000380103 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
SMAGP-201ENST00000380103 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
SMAGP-201ENST00000380103 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMAGP-201ENST00000380103 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
SMAGP-201ENST00000380103 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
SMAGP-201ENST00000380103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMAGP-201ENST00000380103 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
SMAGP-201ENST00000380103 CRB1P82279 1406 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 BAG6P46379 1132 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 USP35Q9P2H5 1018 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 CAMTA1Q9Y6Y1 1673 aa9.42□□□□□ -0.9
SMAGP-201ENST00000380103 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
SMAGP-201ENST00000380103 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
SMAGP-201ENST00000380103 WDR17Q8IZU2 1322 aa9.41□□□□□ -0.9
SMAGP-201ENST00000380103 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
SMAGP-201ENST00000380103 ZRANB1Q9UGI0 708 aa9.41□□□□□ -0.9
SMAGP-201ENST00000380103 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.9
SMAGP-201ENST00000380103 ANKRD36BQ8N2N9 1353 aa9.4□□□□□ -0.9
SMAGP-201ENST00000380103 SOX12O15370 315 aa9.4□□□□□ -0.9
SMAGP-201ENST00000380103 NME9Q86XW9 330 aa9.4□□□□□ -0.9
SMAGP-201ENST00000380103 COG3Q96JB2 828 aa9.4□□□□□ -0.9
SMAGP-201ENST00000380103 LMO7Q8WWI1 1683 aa9.39□□□□□ -0.91
SMAGP-201ENST00000380103 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAGP-201ENST00000380103 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
SMAGP-201ENST00000380103 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
SMAGP-201ENST00000380103 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
SMAGP-201ENST00000380103 AKAP12Q02952 1782 aa9.39□□□□□ -0.91
SMAGP-201ENST00000380103 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
SMAGP-201ENST00000380103 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
SMAGP-201ENST00000380103 ABCC6O95255 1503 aa9.38□□□□□ -0.91
SMAGP-201ENST00000380103 DDB1Q16531 1140 aa9.38□□□□□ -0.91
SMAGP-201ENST00000380103 THSD7AQ9UPZ6 1657 aa9.37□□□□□ -0.91
SMAGP-201ENST00000380103 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
SMAGP-201ENST00000380103 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 EXOC5O00471 708 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 DEFB132Q7Z7B7 95 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 IP6K1Q92551 441 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 NFAT5O94916 1531 aa9.36□□□□□ -0.91
SMAGP-201ENST00000380103 ERBB3P21860 1342 aa9.35□□□□□ -0.91
SMAGP-201ENST00000380103 FYB1O15117 783 aa9.35□□□□□ -0.91
SMAGP-201ENST00000380103 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
SMAGP-201ENST00000380103 ANKRD24Q8TF21 1146 aa9.35□□□□□ -0.91
SMAGP-201ENST00000380103 PARD3Q8TEW0 1356 aa9.35□□□□□ -0.91
SMAGP-201ENST00000380103 DISP2A7MBM2 1401 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
SMAGP-201ENST00000380103 TRIM37O94972 964 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 APBA3O96018 575 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 AMPHP49418 695 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 NLRP2Q9NX02 1062 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 USP54Q70EL1 1684 aa9.34□□□□□ -0.91
SMAGP-201ENST00000380103 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 OVOS2A0A0G2JMS6 1433 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 COL18A1P39060 1754 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 IL2RBP14784 551 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
SMAGP-201ENST00000380103 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 KIF24Q5T7B8 1368 aa9.33□□□□□ -0.92
SMAGP-201ENST00000380103 BCL9O00512 1426 aa9.32□□□□□ -0.92
SMAGP-201ENST00000380103 HSPA5P11021 654 aaKnown RBP9.32□□□□□ -0.92
SMAGP-201ENST00000380103 HOXC9P31274 260 aa9.32□□□□□ -0.92
SMAGP-201ENST00000380103 CAMKK2Q96RR4 588 aa9.32□□□□□ -0.92
SMAGP-201ENST00000380103 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
SMAGP-201ENST00000380103 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
SMAGP-201ENST00000380103 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
SMAGP-201ENST00000380103 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
SMAGP-201ENST00000380103 PLSCR1O15162 318 aa9.31□□□□□ -0.92
SMAGP-201ENST00000380103 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
SMAGP-201ENST00000380103 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms