RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 CABP1Q9NZU7 370 aa10.35□□□□□ -0.75
CDKL5-202ENST00000379996 ATF3P18847 181 aa10.35□□□□□ -0.75
CDKL5-202ENST00000379996 RALBP1Q15311 655 aa10.35□□□□□ -0.75
CDKL5-202ENST00000379996 ABCA3Q99758 1704 aa10.34□□□□□ -0.75
CDKL5-202ENST00000379996 ACEP12821 1306 aa10.33□□□□□ -0.76
CDKL5-202ENST00000379996 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
CDKL5-202ENST00000379996 AATKQ6ZMQ8 1374 aa10.33□□□□□ -0.76
CDKL5-202ENST00000379996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-202ENST00000379996 ZFP91Q96JP5 570 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-202ENST00000379996 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
CDKL5-202ENST00000379996 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
CDKL5-202ENST00000379996 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
CDKL5-202ENST00000379996 NFAT5O94916 1531 aa10.31□□□□□ -0.76
CDKL5-202ENST00000379996 RASEFQ8IZ41 740 aa10.31□□□□□ -0.76
CDKL5-202ENST00000379996 TTC21BQ7Z4L5 1316 aa10.31□□□□□ -0.76
CDKL5-202ENST00000379996 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 SOS2Q07890 1332 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-202ENST00000379996 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 TNS3Q68CZ2 1445 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 NPHP3Q7Z494 1330 aa10.3□□□□□ -0.76
CDKL5-202ENST00000379996 PHLPP1O60346 1717 aa10.29□□□□□ -0.76
CDKL5-202ENST00000379996 BRINP3Q76B58 766 aa10.29□□□□□ -0.76
CDKL5-202ENST00000379996 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
CDKL5-202ENST00000379996 USP19O94966 1318 aa10.29□□□□□ -0.76
CDKL5-202ENST00000379996 FYB1O15117 783 aa10.29□□□□□ -0.76
CDKL5-202ENST00000379996 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-202ENST00000379996 CDK12Q9NYV4 1490 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-202ENST00000379996 ARHGEF10O15013 1369 aa10.28□□□□□ -0.76
CDKL5-202ENST00000379996 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.76
CDKL5-202ENST00000379996 PSME1Q06323 249 aa10.27□□□□□ -0.76
CDKL5-202ENST00000379996 ESCO1Q5FWF5 840 aa10.27□□□□□ -0.76
CDKL5-202ENST00000379996 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.76
CDKL5-202ENST00000379996 RBM33Q96EV2 1170 aaKnown RBP10.27□□□□□ -0.76
CDKL5-202ENST00000379996 LTN1O94822 1766 aa10.27□□□□□ -0.76
CDKL5-202ENST00000379996 MAP2P11137 1827 aaKnown RBP10.27□□□□□ -0.76
CDKL5-202ENST00000379996 VIRMAQ69YN4 1812 aaKnown RBP10.27□□□□□ -0.76
CDKL5-202ENST00000379996 ORAI2Q96SN7 254 aa10.27□□□□□ -0.77
CDKL5-202ENST00000379996 PNPLA6Q8IY17 1366 aa10.27□□□□□ -0.77
CDKL5-202ENST00000379996 RGPD1P0DJD0 1748 aa10.27□□□□□ -0.77
CDKL5-202ENST00000379996 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
CDKL5-202ENST00000379996 PEAK1Q9H792 1746 aa10.27□□□□□ -0.77
CDKL5-202ENST00000379996 FAM208AQ9UK61 1670 aaKnown RBP10.26□□□□□ -0.77
CDKL5-202ENST00000379996 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
CDKL5-202ENST00000379996 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
CDKL5-202ENST00000379996 POLR3GLQ9BT43 218 aa10.26□□□□□ -0.77
CDKL5-202ENST00000379996 COL18A1P39060 1754 aa10.26□□□□□ -0.77
CDKL5-202ENST00000379996 NGDNQ8NEJ9 315 aaKnown RBP10.26□□□□□ -0.77
CDKL5-202ENST00000379996 RTL1A6NKG5 1358 aa10.26□□□□□ -0.77
CDKL5-202ENST00000379996 SPATA31A3Q5VYP0 1347 aa10.25□□□□□ -0.77
CDKL5-202ENST00000379996 NUBP1P53384 320 aa10.25□□□□□ -0.77
CDKL5-202ENST00000379996 TOM1O60784 492 aa10.24□□□□□ -0.77
CDKL5-202ENST00000379996 PMFBP1Q8TBY8 1022 aa10.24□□□□□ -0.77
CDKL5-202ENST00000379996 LMO7Q8WWI1 1683 aa10.24□□□□□ -0.77
CDKL5-202ENST00000379996 ZNF521Q96K83 1311 aa10.24□□□□□ -0.77
CDKL5-202ENST00000379996 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
CDKL5-202ENST00000379996 KRT28Q7Z3Y7 464 aa10.23□□□□□ -0.77
CDKL5-202ENST00000379996 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
CDKL5-202ENST00000379996 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-202ENST00000379996 CPDO75976 1380 aa10.23□□□□□ -0.77
CDKL5-202ENST00000379996 RRP1P56182 461 aaKnown RBP10.22□□□□□ -0.77
CDKL5-202ENST00000379996 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
CDKL5-202ENST00000379996 COG3Q96JB2 828 aa10.22□□□□□ -0.77
CDKL5-202ENST00000379996 NME9Q86XW9 330 aa10.22□□□□□ -0.77
CDKL5-202ENST00000379996 PLEKHG2Q9H7P9 1386 aa10.22□□□□□ -0.77
CDKL5-202ENST00000379996 NUTM2FA1L443 756 aa10.21□□□□□ -0.77
CDKL5-202ENST00000379996 PDE3BQ13370 1112 aa10.21□□□□□ -0.77
CDKL5-202ENST00000379996 MORC1Q86VD1 984 aa10.21□□□□□ -0.77
CDKL5-202ENST00000379996 COL14A1Q05707 1796 aaKnown RBP10.21□□□□□ -0.78
CDKL5-202ENST00000379996 KCNH5Q8NCM2 988 aa10.21□□□□□ -0.78
CDKL5-202ENST00000379996 NCAPD2Q15021 1401 aa10.21□□□□□ -0.78
CDKL5-202ENST00000379996 CC2D1BQ5T0F9 858 aaKnown RBP10.2□□□□□ -0.78
CDKL5-202ENST00000379996 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
CDKL5-202ENST00000379996 FOXO3O43524 673 aa10.2□□□□□ -0.78
CDKL5-202ENST00000379996 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
CDKL5-202ENST00000379996 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
CDKL5-202ENST00000379996 GGNBP2Q9H3C7 697 aa10.19□□□□□ -0.78
CDKL5-202ENST00000379996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.19□□□□□ -0.783e-7■■■■□ 24.6
CDKL5-202ENST00000379996 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.18□□□□□ -0.78
CDKL5-202ENST00000379996 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
CDKL5-202ENST00000379996 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
CDKL5-202ENST00000379996 NRAPQ86VF7 1730 aa10.18□□□□□ -0.78
CDKL5-202ENST00000379996 FLT4P35916 1363 aa10.18□□□□□ -0.78
CDKL5-202ENST00000379996 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
CDKL5-202ENST00000379996 POLKQ9UBT6 870 aa10.17□□□□□ -0.78
CDKL5-202ENST00000379996 PCDHB8Q9UN66 801 aa10.17□□□□□ -0.78
CDKL5-202ENST00000379996 PCDHB13Q9Y5F0 798 aa10.17□□□□□ -0.78
CDKL5-202ENST00000379996 WNK3Q9BYP7 1800 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 TRMT2AQ8IZ69 625 aaKnown RBP10.16□□□□□ -0.78
CDKL5-202ENST00000379996 PRR29P0C7W0 189 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 NLRP6P59044 892 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 RCAN3Q9UKA8 241 aa10.16□□□□□ -0.78
CDKL5-202ENST00000379996 RGPD5Q99666 1765 aa10.15□□□□□ -0.78
CDKL5-202ENST00000379996 GSE1Q14687 1217 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms