RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 DCAF8L1A6NGE4 600 aa25.61■■□□□ 1.69
PDLIM4-202ENST00000379018 BCL11BQ9C0K0 894 aaPredicted RBP25.61■■□□□ 1.69
PDLIM4-202ENST00000379018 COL18A1P39060 1754 aa25.61■■□□□ 1.69
PDLIM4-202ENST00000379018 AKAP12Q02952 1782 aa25.61■■□□□ 1.69
PDLIM4-202ENST00000379018 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
PDLIM4-202ENST00000379018 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
PDLIM4-202ENST00000379018 WDR17Q8IZU2 1322 aa25.6■■□□□ 1.69
PDLIM4-202ENST00000379018 RGPD3A6NKT7 1758 aaPredicted RBP25.59■■□□□ 1.69
PDLIM4-202ENST00000379018 RGPD4Q7Z3J3 1758 aa25.59■■□□□ 1.69
PDLIM4-202ENST00000379018 MARCH10Q8NA82 808 aaPredicted RBP25.59■■□□□ 1.69
PDLIM4-202ENST00000379018 CPSF1Q10570 1443 aaKnown RBP25.59■■□□□ 1.69
PDLIM4-202ENST00000379018 NINLQ9Y2I6 1382 aa25.57■■□□□ 1.68
PDLIM4-202ENST00000379018 PLSCR1O15162 318 aa25.57■■□□□ 1.68
PDLIM4-202ENST00000379018 PDGFDQ9GZP0 370 aaPredicted RBP25.57■■□□□ 1.68
PDLIM4-202ENST00000379018 ZBTB7AO95365 584 aa25.56■■□□□ 1.68
PDLIM4-202ENST00000379018 TTC21BQ7Z4L5 1316 aa25.56■■□□□ 1.68
PDLIM4-202ENST00000379018 L3MBTL2Q969R5 705 aa25.55■■□□□ 1.68
PDLIM4-202ENST00000379018 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
PDLIM4-202ENST00000379018 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
PDLIM4-202ENST00000379018 ARHGEF25Q86VW2 580 aa25.54■■□□□ 1.68
PDLIM4-202ENST00000379018 KCNH5Q8NCM2 988 aa25.52■■□□□ 1.68
PDLIM4-202ENST00000379018 CDCA7Q9BWT1 371 aaPredicted RBP25.52■■□□□ 1.68
PDLIM4-202ENST00000379018 PROM2Q8N271 834 aa25.51■■□□□ 1.67
PDLIM4-202ENST00000379018 ATF5Q9Y2D1 282 aaPredicted RBP25.51■■□□□ 1.67
PDLIM4-202ENST00000379018 ROCK2O75116 1388 aaKnown RBP25.51■■□□□ 1.67
PDLIM4-202ENST00000379018 CARD10Q9BWT7 1032 aa25.5■■□□□ 1.67
PDLIM4-202ENST00000379018 STK32BQ9NY57 414 aa25.5■■□□□ 1.67
PDLIM4-202ENST00000379018 MYOM1P52179 1685 aa25.49■■□□□ 1.67
PDLIM4-202ENST00000379018 EXOC5O00471 708 aa25.49■■□□□ 1.67
PDLIM4-202ENST00000379018 TXNRD1Q16881 649 aa25.49■■□□□ 1.67
PDLIM4-202ENST00000379018 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
PDLIM4-202ENST00000379018 ZNF692Q9BU19 519 aaPredicted RBP25.49■■□□□ 1.67
PDLIM4-202ENST00000379018 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
PDLIM4-202ENST00000379018 KTN1Q86UP2 1357 aaKnown RBP25.47■■□□□ 1.67
PDLIM4-202ENST00000379018 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
PDLIM4-202ENST00000379018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.47■■□□□ 1.67
PDLIM4-202ENST00000379018 NFAT5O94916 1531 aa25.47■■□□□ 1.67
PDLIM4-202ENST00000379018 ACSBG1Q96GR2 724 aa25.46■■□□□ 1.67
PDLIM4-202ENST00000379018 KAT6BQ8WYB5 2073 aa25.44■■□□□ 1.66
PDLIM4-202ENST00000379018 BCL9O00512 1426 aa25.44■■□□□ 1.66
PDLIM4-202ENST00000379018 TNS2Q63HR2 1409 aa25.44■■□□□ 1.66
PDLIM4-202ENST00000379018 CCDC7Q96M83 1385 aa25.44■■□□□ 1.66
PDLIM4-202ENST00000379018 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
PDLIM4-202ENST00000379018 NLRP2Q9NX02 1062 aa25.43■■□□□ 1.66
PDLIM4-202ENST00000379018 PTGER2P43116 358 aa25.42■■□□□ 1.66
PDLIM4-202ENST00000379018 MON2Q7Z3U7 1717 aa25.4■■□□□ 1.66
PDLIM4-202ENST00000379018 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
PDLIM4-202ENST00000379018 NME9Q86XW9 330 aa25.39■■□□□ 1.66
PDLIM4-202ENST00000379018 FHDC1Q9C0D6 1143 aaPredicted RBP25.39■■□□□ 1.66
PDLIM4-202ENST00000379018 TMC1Q8TDI8 760 aa25.38■■□□□ 1.65
PDLIM4-202ENST00000379018 LTN1O94822 1766 aa25.38■■□□□ 1.65
PDLIM4-202ENST00000379018 MTFR1LQ9H019 292 aa25.36■■□□□ 1.65
PDLIM4-202ENST00000379018 ABCC6O95255 1503 aa25.36■■□□□ 1.65
PDLIM4-202ENST00000379018 ERBB3P21860 1342 aa25.36■■□□□ 1.65
PDLIM4-202ENST00000379018 IL2RBP14784 551 aa25.34■■□□□ 1.65
PDLIM4-202ENST00000379018 SYT17Q9BSW7 474 aa25.34■■□□□ 1.65
PDLIM4-202ENST00000379018 BTAF1O14981 1849 aa25.33■■□□□ 1.65
PDLIM4-202ENST00000379018 ANKRD24Q8TF21 1146 aa25.33■■□□□ 1.65
PDLIM4-202ENST00000379018 USP31Q70CQ4 1352 aa25.31■■□□□ 1.64
PDLIM4-202ENST00000379018 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
PDLIM4-202ENST00000379018 ZNF784Q8NCA9 323 aaPredicted RBP25.3■■□□□ 1.64
PDLIM4-202ENST00000379018 SBNO2Q9Y2G9 1366 aa25.3■■□□□ 1.64
PDLIM4-202ENST00000379018 CD163L1Q9NR16 1453 aa25.29■■□□□ 1.64
PDLIM4-202ENST00000379018 ZNF827Q17R98 1081 aa25.29■■□□□ 1.64
PDLIM4-202ENST00000379018 KLHL34Q8N239 644 aa25.29■■□□□ 1.64
PDLIM4-202ENST00000379018 LTV1Q96GA3 475 aaPredicted RBP25.29■■□□□ 1.64
PDLIM4-202ENST00000379018 CARD11Q9BXL7 1154 aa25.29■■□□□ 1.64
PDLIM4-202ENST00000379018 PAPPAQ13219 1627 aa25.28■■□□□ 1.64
PDLIM4-202ENST00000379018 ARXQ96QS3 562 aa25.28■■□□□ 1.64
PDLIM4-202ENST00000379018 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
PDLIM4-202ENST00000379018 USP54Q70EL1 1684 aa25.28■■□□□ 1.64
PDLIM4-202ENST00000379018 SGIP1Q9BQI5 828 aa25.27■■□□□ 1.64
PDLIM4-202ENST00000379018 DDX54Q8TDD1 881 aaKnown RBP25.26■■□□□ 1.63
PDLIM4-202ENST00000379018 CHD4Q14839 1912 aa25.24■■□□□ 1.63
PDLIM4-202ENST00000379018 LRRC4BQ9NT99 713 aa25.24■■□□□ 1.63
PDLIM4-202ENST00000379018 EDC4Q6P2E9 1401 aaKnown RBP25.23■■□□□ 1.63
PDLIM4-202ENST00000379018 SYTL4Q96C24 671 aaPredicted RBP25.23■■□□□ 1.63
PDLIM4-202ENST00000379018 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
PDLIM4-202ENST00000379018 PELP1Q8IZL8 1130 aaKnown RBP25.21■■□□□ 1.63
PDLIM4-202ENST00000379018 TERF2IPQ9NYB0 399 aa25.21■■□□□ 1.63
PDLIM4-202ENST00000379018 UTRNP46939 3433 aa25.21■■□□□ 1.63
PDLIM4-202ENST00000379018 KCNQ4P56696 695 aa25.2■■□□□ 1.62
PDLIM4-202ENST00000379018 GPR162Q16538 588 aa25.2■■□□□ 1.62
PDLIM4-202ENST00000379018 IP6K1Q92551 441 aa25.16■■□□□ 1.62
PDLIM4-202ENST00000379018 AKT1S1Q96B36 256 aa25.16■■□□□ 1.62
PDLIM4-202ENST00000379018 DOT1LQ8TEK3 1739 aa25.15■■□□□ 1.62
PDLIM4-202ENST00000379018 SENP3-EIF4A1A0A087X0R7 540 aa25.15■■□□□ 1.62
PDLIM4-202ENST00000379018 POLD1P28340 1107 aa25.15■■□□□ 1.62
PDLIM4-202ENST00000379018 TFCP2L1Q9NZI6 479 aa25.15■■□□□ 1.62
PDLIM4-202ENST00000379018 FAM208AQ9UK61 1670 aaKnown RBP25.15■■□□□ 1.62
PDLIM4-202ENST00000379018 FBLN1P23142 703 aa25.14■■□□□ 1.62
PDLIM4-202ENST00000379018 TUBGCP6Q96RT7 1819 aa25.14■■□□□ 1.61
PDLIM4-202ENST00000379018 PNPLA7Q6ZV29 1317 aa25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 AMPHP49418 695 aa25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 PRIM1P49642 420 aaKnown RBP25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 MAP3K5Q99683 1374 aa25.13■■□□□ 1.61
PDLIM4-202ENST00000379018 COG3Q96JB2 828 aa25.12■■□□□ 1.61
PDLIM4-202ENST00000379018 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms