RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 STRN4Q9NRL3 753 aa23.54■■□□□ 1.36
ITM2B-201ENST00000378549 MAP3K19Q56UN5 1328 aa23.54■■□□□ 1.36
ITM2B-201ENST00000378549 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
ITM2B-201ENST00000378549 NPC1L1Q9UHC9 1359 aa23.53■■□□□ 1.36
ITM2B-201ENST00000378549 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
ITM2B-201ENST00000378549 EVA1CP58658 441 aa23.53■■□□□ 1.36
ITM2B-201ENST00000378549 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
ITM2B-201ENST00000378549 PEAK1Q9H792 1746 aa23.53■■□□□ 1.36
ITM2B-201ENST00000378549 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
ITM2B-201ENST00000378549 BLMP54132 1417 aaPredicted RBP23.52■■□□□ 1.36
ITM2B-201ENST00000378549 FBLN1P23142 703 aa23.52■■□□□ 1.36
ITM2B-201ENST00000378549 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
ITM2B-201ENST00000378549 VPS72Q15906 364 aa23.52■■□□□ 1.36
ITM2B-201ENST00000378549 GLI3P10071 1580 aa23.52■■□□□ 1.36
ITM2B-201ENST00000378549 TNNT2P45379 298 aaPredicted RBP23.51■■□□□ 1.35
ITM2B-201ENST00000378549 AMPHP49418 695 aa23.51■■□□□ 1.35
ITM2B-201ENST00000378549 CC2D1BQ5T0F9 858 aaKnown RBP23.51■■□□□ 1.35
ITM2B-201ENST00000378549 RXRBP28702 533 aa23.5■■□□□ 1.35
ITM2B-201ENST00000378549 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
ITM2B-201ENST00000378549 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
ITM2B-201ENST00000378549 AXIN2Q9Y2T1 843 aa23.5■■□□□ 1.35
ITM2B-201ENST00000378549 KIF24Q5T7B8 1368 aa23.5■■□□□ 1.35
ITM2B-201ENST00000378549 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
ITM2B-201ENST00000378549 WNK3Q9BYP7 1800 aa23.48■■□□□ 1.35
ITM2B-201ENST00000378549 IP6K1Q92551 441 aa23.48■■□□□ 1.35
ITM2B-201ENST00000378549 FLT4P35916 1363 aa23.48■■□□□ 1.35
ITM2B-201ENST00000378549 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
ITM2B-201ENST00000378549 CSB-PGBD3P0DP91 1061 aa23.47■■□□□ 1.35
ITM2B-201ENST00000378549 HOXC9P31274 260 aa23.47■■□□□ 1.35
ITM2B-201ENST00000378549 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
ITM2B-201ENST00000378549 CRB1P82279 1406 aa23.47■■□□□ 1.35
ITM2B-201ENST00000378549 WDR17Q8IZU2 1322 aa23.46■■□□□ 1.35
ITM2B-201ENST00000378549 CDK12Q9NYV4 1490 aaPredicted RBP23.45■■□□□ 1.34
ITM2B-201ENST00000378549 ERBB3P21860 1342 aa23.45■■□□□ 1.34
ITM2B-201ENST00000378549 SPATA31A5Q5VU36 1347 aa23.45■■□□□ 1.34
ITM2B-201ENST00000378549 SPATA31A7Q8IWB4 1347 aa23.45■■□□□ 1.34
ITM2B-201ENST00000378549 PPM1GO15355 546 aaPredicted RBP23.45■■□□□ 1.34
ITM2B-201ENST00000378549 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
ITM2B-201ENST00000378549 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
ITM2B-201ENST00000378549 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
ITM2B-201ENST00000378549 TOM1L2Q6ZVM7 507 aa23.44■■□□□ 1.34
ITM2B-201ENST00000378549 SPATA31A1Q5TZJ5 1347 aa23.43■■□□□ 1.34
ITM2B-201ENST00000378549 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
ITM2B-201ENST00000378549 ANKRD24Q8TF21 1146 aa23.42■■□□□ 1.34
ITM2B-201ENST00000378549 USP35Q9P2H5 1018 aa23.42■■□□□ 1.34
ITM2B-201ENST00000378549 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
ITM2B-201ENST00000378549 INSRP06213 1382 aa23.41■■□□□ 1.34
ITM2B-201ENST00000378549 LTV1Q96GA3 475 aaPredicted RBP23.41■■□□□ 1.34
ITM2B-201ENST00000378549 RGS12O14924 1447 aa23.41■■□□□ 1.34
ITM2B-201ENST00000378549 THSD7AQ9UPZ6 1657 aa23.4■■□□□ 1.34
ITM2B-201ENST00000378549 HSP90AB2PQ58FF8 381 aa23.38■■□□□ 1.33
ITM2B-201ENST00000378549 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
ITM2B-201ENST00000378549 NLRP2Q9NX02 1062 aa23.38■■□□□ 1.33
ITM2B-201ENST00000378549 PARP4Q9UKK3 1724 aaKnown RBP23.37■■□□□ 1.33
ITM2B-201ENST00000378549 A0A0G2JS52 829 aa23.37■■□□□ 1.33
ITM2B-201ENST00000378549 MYT1Q01538 1121 aa23.37■■□□□ 1.33
ITM2B-201ENST00000378549 FAM98CQ17RN3 349 aaKnown RBP23.37■■□□□ 1.33
ITM2B-201ENST00000378549 CARD10Q9BWT7 1032 aa23.37■■□□□ 1.33
ITM2B-201ENST00000378549 THRAP3Q9Y2W1 955 aaKnown RBP23.37■■□□□ 1.33
ITM2B-201ENST00000378549 ILDR2Q71H61 639 aa23.35■■□□□ 1.33
ITM2B-201ENST00000378549 BARGINQ6ZT62 677 aa23.34■■□□□ 1.33
ITM2B-201ENST00000378549 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.33
ITM2B-201ENST00000378549 LRRC37A3O60309 1634 aa23.33■■□□□ 1.32
ITM2B-201ENST00000378549 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
ITM2B-201ENST00000378549 MTHFSP49914 203 aa23.32■■□□□ 1.32
ITM2B-201ENST00000378549 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
ITM2B-201ENST00000378549 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
ITM2B-201ENST00000378549 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
ITM2B-201ENST00000378549 EIF4A2Q14240 407 aaKnown RBP23.28■■□□□ 1.32
ITM2B-201ENST00000378549 RALBP1Q15311 655 aa23.28■■□□□ 1.32
ITM2B-201ENST00000378549 RGPD1P0DJD0 1748 aa23.28■■□□□ 1.32
ITM2B-201ENST00000378549 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
ITM2B-201ENST00000378549 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
ITM2B-201ENST00000378549 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
ITM2B-201ENST00000378549 IL2RBP14784 551 aa23.25■■□□□ 1.31
ITM2B-201ENST00000378549 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
ITM2B-201ENST00000378549 USHBP1Q8N6Y0 703 aa23.24■■□□□ 1.31
ITM2B-201ENST00000378549 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
ITM2B-201ENST00000378549 KRT27Q7Z3Y8 459 aa23.23■■□□□ 1.31
ITM2B-201ENST00000378549 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
ITM2B-201ENST00000378549 DDB1Q16531 1140 aa23.22■■□□□ 1.31
ITM2B-201ENST00000378549 EYA1Q99502 592 aa23.22■■□□□ 1.31
ITM2B-201ENST00000378549 TNS2Q63HR2 1409 aa23.22■■□□□ 1.31
ITM2B-201ENST00000378549 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
ITM2B-201ENST00000378549 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
ITM2B-201ENST00000378549 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
ITM2B-201ENST00000378549 MEGF6O75095 1541 aa23.21■■□□□ 1.31
ITM2B-201ENST00000378549 SHANK3Q9BYB0 1731 aa23.21■■□□□ 1.31
ITM2B-201ENST00000378549 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
ITM2B-201ENST00000378549 PKD1L3Q7Z443 1732 aa23.2■■□□□ 1.3
ITM2B-201ENST00000378549 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
ITM2B-201ENST00000378549 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
ITM2B-201ENST00000378549 IL13P35225 146 aa23.19■■□□□ 1.3
ITM2B-201ENST00000378549 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
ITM2B-201ENST00000378549 OVOS2A0A0G2JMS6 1433 aa23.18■■□□□ 1.3
ITM2B-201ENST00000378549 EXOC5O00471 708 aa23.18■■□□□ 1.3
ITM2B-201ENST00000378549 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
ITM2B-201ENST00000378549 EP400Q96L91 3159 aa23.17■■□□□ 1.3
ITM2B-201ENST00000378549 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
ITM2B-201ENST00000378549 ANP32CO43423 234 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms