RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 COG3Q96JB2 828 aa19.33■□□□□ 0.69
RER1-203ENST00000378513 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
RER1-203ENST00000378513 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
RER1-203ENST00000378513 RIMS2Q9UQ26 1411 aa19.32■□□□□ 0.68
RER1-203ENST00000378513 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
RER1-203ENST00000378513 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
RER1-203ENST00000378513 ESF1Q9H501 851 aaKnown RBP19.31■□□□□ 0.68
RER1-203ENST00000378513 CD2BP2O95400 341 aaKnown RBP19.31■□□□□ 0.68
RER1-203ENST00000378513 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
RER1-203ENST00000378513 HSCBQ8IWL3 235 aa19.3■□□□□ 0.68
RER1-203ENST00000378513 ALDH1L2Q3SY69 923 aa19.3■□□□□ 0.68
RER1-203ENST00000378513 GNAI1P63096 354 aa19.29■□□□□ 0.68
RER1-203ENST00000378513 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
RER1-203ENST00000378513 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
RER1-203ENST00000378513 MCM4P33991 863 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 HSP90AB2PQ58FF8 381 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 PANK2Q9BZ23 570 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.68
RER1-203ENST00000378513 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.67
RER1-203ENST00000378513 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
RER1-203ENST00000378513 FOXO3O43524 673 aa19.26■□□□□ 0.67
RER1-203ENST00000378513 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
RER1-203ENST00000378513 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
RER1-203ENST00000378513 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
RER1-203ENST00000378513 NAP1L5Q96NT1 182 aaPredicted RBP19.26■□□□□ 0.67
RER1-203ENST00000378513 CPS1P31327 1500 aa19.25■□□□□ 0.67
RER1-203ENST00000378513 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
RER1-203ENST00000378513 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
RER1-203ENST00000378513 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
RER1-203ENST00000378513 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
RER1-203ENST00000378513 CEBPAP49715 358 aaPredicted RBP19.25■□□□□ 0.67
RER1-203ENST00000378513 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
RER1-203ENST00000378513 RRAGDQ9NQL2 400 aaPredicted RBP19.25■□□□□ 0.67
RER1-203ENST00000378513 EIF4A2Q14240 407 aaKnown RBP19.24■□□□□ 0.67
RER1-203ENST00000378513 CFAP44Q96MT7 982 aa19.24■□□□□ 0.67
RER1-203ENST00000378513 CHMP5Q9NZZ3 219 aa19.24■□□□□ 0.67
RER1-203ENST00000378513 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
RER1-203ENST00000378513 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
RER1-203ENST00000378513 FAM43AQ8N2R8 423 aa19.22■□□□□ 0.67
RER1-203ENST00000378513 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
RER1-203ENST00000378513 MED14O60244 1454 aa19.22■□□□□ 0.67
RER1-203ENST00000378513 TRAK2O60296 914 aa19.22■□□□□ 0.67
RER1-203ENST00000378513 F6X3S4 739 aa19.21■□□□□ 0.67
RER1-203ENST00000378513 CLTCQ00610 1675 aaKnown RBP19.21■□□□□ 0.66
RER1-203ENST00000378513 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
RER1-203ENST00000378513 KIF2CQ99661 725 aa19.2■□□□□ 0.66
RER1-203ENST00000378513 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 ACEP12821 1306 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 CALD1Q05682 793 aaKnown RBP19.19■□□□□ 0.66
RER1-203ENST00000378513 ABCC4O15439 1325 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 EDC4Q6P2E9 1401 aaKnown RBP19.19■□□□□ 0.66
RER1-203ENST00000378513 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 TSHZ3Q63HK5 1081 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 MEIS3Q99687 375 aa19.19■□□□□ 0.66
RER1-203ENST00000378513 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
RER1-203ENST00000378513 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
RER1-203ENST00000378513 CPSF1Q10570 1443 aaKnown RBP19.18■□□□□ 0.66
RER1-203ENST00000378513 ROBO2Q9HCK4 1378 aa19.17■□□□□ 0.66
RER1-203ENST00000378513 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
RER1-203ENST00000378513 GCC1Q96CN9 775 aa19.17■□□□□ 0.66
RER1-203ENST00000378513 G2E3Q7L622 706 aa19.17■□□□□ 0.66
RER1-203ENST00000378513 ANKRD26Q9UPS8 1709 aa19.17■□□□□ 0.66
RER1-203ENST00000378513 ZMYM3Q14202 1370 aa19.17■□□□□ 0.66
RER1-203ENST00000378513 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
RER1-203ENST00000378513 ATP7BP35670 1465 aa19.16■□□□□ 0.66
RER1-203ENST00000378513 GOLGA6L3A6NEY3 463 aa19.16■□□□□ 0.66
RER1-203ENST00000378513 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
RER1-203ENST00000378513 LTKP29376 864 aa19.16■□□□□ 0.66
RER1-203ENST00000378513 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
RER1-203ENST00000378513 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
RER1-203ENST00000378513 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
RER1-203ENST00000378513 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
RER1-203ENST00000378513 TTC21BQ7Z4L5 1316 aa19.15■□□□□ 0.66
RER1-203ENST00000378513 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.66
RER1-203ENST00000378513 LMOD3Q0VAK6 560 aa19.14■□□□□ 0.65
RER1-203ENST00000378513 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
RER1-203ENST00000378513 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
RER1-203ENST00000378513 SSFA2P28290 1259 aa19.13■□□□□ 0.65
RER1-203ENST00000378513 ZNF428Q96B54 188 aa19.12■□□□□ 0.65
RER1-203ENST00000378513 MSH6P52701 1360 aa19.12■□□□□ 0.65
RER1-203ENST00000378513 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
RER1-203ENST00000378513 CHAMP1Q96JM3 812 aa19.11■□□□□ 0.65
RER1-203ENST00000378513 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
RER1-203ENST00000378513 CDK12Q9NYV4 1490 aaPredicted RBP19.1■□□□□ 0.65
RER1-203ENST00000378513 CDC45O75419 566 aa19.1■□□□□ 0.65
RER1-203ENST00000378513 MTHFSDQ2M296 383 aaKnown RBP19.1■□□□□ 0.65
RER1-203ENST00000378513 MAP3K19Q56UN5 1328 aa19.1■□□□□ 0.65
RER1-203ENST00000378513 L1TD1Q5T7N2 865 aaKnown RBP19.1■□□□□ 0.65
RER1-203ENST00000378513 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
RER1-203ENST00000378513 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
RER1-203ENST00000378513 CEP85Q6P2H3 762 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
RER1-203ENST00000378513 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 581.6 ms