RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
SMARCE1-203ENST00000377808 NFAT5O94916 1531 aa16.11■□□□□ 0.17
SMARCE1-203ENST00000377808 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
SMARCE1-203ENST00000377808 CRB1P82279 1406 aa16.11■□□□□ 0.17
SMARCE1-203ENST00000377808 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
SMARCE1-203ENST00000377808 BLMP54132 1417 aaPredicted RBP16.1■□□□□ 0.17
SMARCE1-203ENST00000377808 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMARCE1-203ENST00000377808 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
SMARCE1-203ENST00000377808 COG3Q96JB2 828 aa16.1■□□□□ 0.17
SMARCE1-203ENST00000377808 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
SMARCE1-203ENST00000377808 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
SMARCE1-203ENST00000377808 COL18A1P39060 1754 aa16.08■□□□□ 0.17
SMARCE1-203ENST00000377808 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.17
SMARCE1-203ENST00000377808 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.17
SMARCE1-203ENST00000377808 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
SMARCE1-203ENST00000377808 THRAP3Q9Y2W1 955 aaKnown RBP16.08■□□□□ 0.16
SMARCE1-203ENST00000377808 USP54Q70EL1 1684 aa16.08■□□□□ 0.16
SMARCE1-203ENST00000377808 WDR17Q8IZU2 1322 aa16.07■□□□□ 0.16
SMARCE1-203ENST00000377808 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
SMARCE1-203ENST00000377808 LTN1O94822 1766 aa16.06■□□□□ 0.16
SMARCE1-203ENST00000377808 DEFB132Q7Z7B7 95 aa16.06■□□□□ 0.16
SMARCE1-203ENST00000377808 GGNBP2Q9H3C7 697 aa16.05■□□□□ 0.16
SMARCE1-203ENST00000377808 ABCC6O95255 1503 aa16.04■□□□□ 0.16
SMARCE1-203ENST00000377808 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SMARCE1-203ENST00000377808 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
SMARCE1-203ENST00000377808 LTV1Q96GA3 475 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-203ENST00000377808 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
SMARCE1-203ENST00000377808 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
SMARCE1-203ENST00000377808 FBLN1P23142 703 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 BAG6P46379 1132 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 AMPHP49418 695 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 DDB1Q16531 1140 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.16
SMARCE1-203ENST00000377808 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
SMARCE1-203ENST00000377808 FYB1O15117 783 aa16.01■□□□□ 0.15
SMARCE1-203ENST00000377808 TRIM37O94972 964 aa16.01■□□□□ 0.15
SMARCE1-203ENST00000377808 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-203ENST00000377808 ERBB3P21860 1342 aa16.01■□□□□ 0.15
SMARCE1-203ENST00000377808 RGPD1P0DJD0 1748 aa16■□□□□ 0.15
SMARCE1-203ENST00000377808 RRS1Q15050 365 aaKnown RBP16■□□□□ 0.15
SMARCE1-203ENST00000377808 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
SMARCE1-203ENST00000377808 LRRC37A3O60309 1634 aa16■□□□□ 0.15
SMARCE1-203ENST00000377808 CCDC7Q96M83 1385 aa16■□□□□ 0.15
SMARCE1-203ENST00000377808 WNK3Q9BYP7 1800 aa15.99■□□□□ 0.15
SMARCE1-203ENST00000377808 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-203ENST00000377808 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
SMARCE1-203ENST00000377808 IP6K1Q92551 441 aa15.98■□□□□ 0.15
SMARCE1-203ENST00000377808 HOXC9P31274 260 aa15.97■□□□□ 0.15
SMARCE1-203ENST00000377808 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
SMARCE1-203ENST00000377808 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
SMARCE1-203ENST00000377808 EXOC5O00471 708 aa15.96■□□□□ 0.15
SMARCE1-203ENST00000377808 APBA3O96018 575 aa15.96■□□□□ 0.15
SMARCE1-203ENST00000377808 CGNL1Q0VF96 1302 aa15.95■□□□□ 0.14
SMARCE1-203ENST00000377808 TNS1Q9HBL0 1735 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-203ENST00000377808 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
SMARCE1-203ENST00000377808 IL2RBP14784 551 aa15.94■□□□□ 0.14
SMARCE1-203ENST00000377808 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-203ENST00000377808 RTL1A6NKG5 1358 aa15.94■□□□□ 0.14
SMARCE1-203ENST00000377808 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
SMARCE1-203ENST00000377808 PANK3Q9H999 370 aa15.94■□□□□ 0.14
SMARCE1-203ENST00000377808 TNS2Q63HR2 1409 aa15.93■□□□□ 0.14
SMARCE1-203ENST00000377808 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-203ENST00000377808 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-203ENST00000377808 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
SMARCE1-203ENST00000377808 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-203ENST00000377808 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-203ENST00000377808 EMILIN1Q9Y6C2 1016 aa15.91■□□□□ 0.14
SMARCE1-203ENST00000377808 FLT4P35916 1363 aa15.9■□□□□ 0.14
SMARCE1-203ENST00000377808 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
SMARCE1-203ENST00000377808 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
SMARCE1-203ENST00000377808 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
SMARCE1-203ENST00000377808 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
SMARCE1-203ENST00000377808 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-203ENST00000377808 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-203ENST00000377808 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
SMARCE1-203ENST00000377808 CAMKK2Q96RR4 588 aa15.88■□□□□ 0.13
SMARCE1-203ENST00000377808 INSRP06213 1382 aa15.87■□□□□ 0.13
SMARCE1-203ENST00000377808 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
SMARCE1-203ENST00000377808 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
SMARCE1-203ENST00000377808 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
SMARCE1-203ENST00000377808 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
SMARCE1-203ENST00000377808 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
SMARCE1-203ENST00000377808 KIF24Q5T7B8 1368 aa15.86■□□□□ 0.13
SMARCE1-203ENST00000377808 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
SMARCE1-203ENST00000377808 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
SMARCE1-203ENST00000377808 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
SMARCE1-203ENST00000377808 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
SMARCE1-203ENST00000377808 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
SMARCE1-203ENST00000377808 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-203ENST00000377808 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
SMARCE1-203ENST00000377808 BCL9O00512 1426 aa15.83■□□□□ 0.13
SMARCE1-203ENST00000377808 MEGF6O75095 1541 aa15.83■□□□□ 0.13
SMARCE1-203ENST00000377808 KCNQ2O43526 872 aa15.83■□□□□ 0.12
SMARCE1-203ENST00000377808 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.12
SMARCE1-203ENST00000377808 POLKQ9UBT6 870 aa15.83■□□□□ 0.12
SMARCE1-203ENST00000377808 NSD2O96028 1365 aa15.83■□□□□ 0.12
SMARCE1-203ENST00000377808 MAP2P11137 1827 aaKnown RBP15.83■□□□□ 0.12
SMARCE1-203ENST00000377808 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
SMARCE1-203ENST00000377808 NBPF14Q5TI25 921 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms