RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 WDR17Q8IZU2 1322 aa26.26■■□□□ 1.79
HDAC6-202ENST00000376610 DDB1Q16531 1140 aa26.26■■□□□ 1.79
HDAC6-202ENST00000376610 TONSLQ96HA7 1378 aa26.25■■□□□ 1.79
HDAC6-202ENST00000376610 CSB-PGBD3P0DP91 1061 aa26.25■■□□□ 1.79
HDAC6-202ENST00000376610 NBPF14Q5TI25 921 aa26.25■■□□□ 1.79
HDAC6-202ENST00000376610 ARHGEF25Q86VW2 580 aa26.25■■□□□ 1.79
HDAC6-202ENST00000376610 CDCA7Q9BWT1 371 aaPredicted RBP26.24■■□□□ 1.79
HDAC6-202ENST00000376610 RREB1Q92766 1687 aa26.24■■□□□ 1.79
HDAC6-202ENST00000376610 AXIN2Q9Y2T1 843 aa26.23■■□□□ 1.79
HDAC6-202ENST00000376610 LRRC37A3O60309 1634 aa26.23■■□□□ 1.79
HDAC6-202ENST00000376610 MON2Q7Z3U7 1717 aa26.22■■□□□ 1.79
HDAC6-202ENST00000376610 WNK3Q9BYP7 1800 aa26.21■■□□□ 1.79
HDAC6-202ENST00000376610 RGPD5Q99666 1765 aa26.2■■□□□ 1.79
HDAC6-202ENST00000376610 NUP188Q5SRE5 1749 aa26.2■■□□□ 1.79
HDAC6-202ENST00000376610 TMC1Q8TDI8 760 aa26.2■■□□□ 1.78
HDAC6-202ENST00000376610 HDGFL2Q7Z4V5 671 aaPredicted RBP26.19■■□□□ 1.78
HDAC6-202ENST00000376610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
HDAC6-202ENST00000376610 CARD10Q9BWT7 1032 aa26.18■■□□□ 1.78
HDAC6-202ENST00000376610 PEAK1Q9H792 1746 aa26.18■■□□□ 1.78
HDAC6-202ENST00000376610 NFAT5O94916 1531 aa26.18■■□□□ 1.78
HDAC6-202ENST00000376610 ABCC6O95255 1503 aa26.18■■□□□ 1.78
HDAC6-202ENST00000376610 SBF2Q86WG5 1849 aa26.16■■□□□ 1.78
HDAC6-202ENST00000376610 CCDC7Q96M83 1385 aa26.15■■□□□ 1.78
HDAC6-202ENST00000376610 TERF2IPQ9NYB0 399 aa26.14■■□□□ 1.78
HDAC6-202ENST00000376610 USP31Q70CQ4 1352 aa26.14■■□□□ 1.78
HDAC6-202ENST00000376610 RGPD3A6NKT7 1758 aaPredicted RBP26.13■■□□□ 1.77
HDAC6-202ENST00000376610 RGPD4Q7Z3J3 1758 aa26.13■■□□□ 1.77
HDAC6-202ENST00000376610 BCL11BQ9C0K0 894 aaPredicted RBP26.13■■□□□ 1.77
HDAC6-202ENST00000376610 EXOC5O00471 708 aa26.12■■□□□ 1.77
HDAC6-202ENST00000376610 PLSCR1O15162 318 aa26.12■■□□□ 1.77
HDAC6-202ENST00000376610 USP54Q70EL1 1684 aa26.12■■□□□ 1.77
HDAC6-202ENST00000376610 NME9Q86XW9 330 aa26.11■■□□□ 1.77
HDAC6-202ENST00000376610 MARCH10Q8NA82 808 aaPredicted RBP26.11■■□□□ 1.77
HDAC6-202ENST00000376610 CD163L1Q9NR16 1453 aa26.11■■□□□ 1.77
HDAC6-202ENST00000376610 SLC12A5Q9H2X9 1139 aa26.1■■□□□ 1.77
HDAC6-202ENST00000376610 EDC4Q6P2E9 1401 aaKnown RBP26.1■■□□□ 1.77
HDAC6-202ENST00000376610 BCL9O00512 1426 aa26.09■■□□□ 1.77
HDAC6-202ENST00000376610 PUS7Q96PZ0 661 aaKnown RBP26.09■■□□□ 1.77
HDAC6-202ENST00000376610 LTN1O94822 1766 aa26.08■■□□□ 1.77
HDAC6-202ENST00000376610 SLC24A1O60721 1099 aa26.08■■□□□ 1.77
HDAC6-202ENST00000376610 NLRP2Q9NX02 1062 aa26.07■■□□□ 1.76
HDAC6-202ENST00000376610 ERBB3P21860 1342 aa26.06■■□□□ 1.76
HDAC6-202ENST00000376610 A0A1W2PP64 1363 aa26.06■■□□□ 1.76
HDAC6-202ENST00000376610 NINLQ9Y2I6 1382 aa26.05■■□□□ 1.76
HDAC6-202ENST00000376610 TNS2Q63HR2 1409 aa26.05■■□□□ 1.76
HDAC6-202ENST00000376610 SPON1Q9HCB6 807 aa26.04■■□□□ 1.76
HDAC6-202ENST00000376610 PPP1R1BQ9UD71 204 aaPredicted RBP26.03■■□□□ 1.76
HDAC6-202ENST00000376610 ST20-MTHFSA0A0A6YYL1 179 aa26.01■■□□□ 1.75
HDAC6-202ENST00000376610 PTF1AQ7RTS3 328 aa26.01■■□□□ 1.75
HDAC6-202ENST00000376610 ANKRD24Q8TF21 1146 aa26.01■■□□□ 1.75
HDAC6-202ENST00000376610 KCNQ2O43526 872 aa26■■□□□ 1.75
HDAC6-202ENST00000376610 IL2RBP14784 551 aa26■■□□□ 1.75
HDAC6-202ENST00000376610 TESK2Q96S53 571 aa25.97■■□□□ 1.75
HDAC6-202ENST00000376610 KAT6BQ8WYB5 2073 aa25.97■■□□□ 1.75
HDAC6-202ENST00000376610 TRIM26Q12899 539 aaPredicted RBP25.96■■□□□ 1.75
HDAC6-202ENST00000376610 COG3Q96JB2 828 aa25.96■■□□□ 1.75
HDAC6-202ENST00000376610 ANO8Q9HCE9 1232 aaPredicted RBP25.96■■□□□ 1.75
HDAC6-202ENST00000376610 TXNRD1Q16881 649 aa25.95■■□□□ 1.74
HDAC6-202ENST00000376610 STK32BQ9NY57 414 aa25.95■■□□□ 1.74
HDAC6-202ENST00000376610 NHSQ6T4R5 1651 aa25.95■■□□□ 1.74
HDAC6-202ENST00000376610 PROM2Q8N271 834 aa25.94■■□□□ 1.74
HDAC6-202ENST00000376610 IP6K1Q92551 441 aa25.94■■□□□ 1.74
HDAC6-202ENST00000376610 FAM208AQ9UK61 1670 aaKnown RBP25.93■■□□□ 1.74
HDAC6-202ENST00000376610 DCAF8L1A6NGE4 600 aa25.93■■□□□ 1.74
HDAC6-202ENST00000376610 ACSBG1Q96GR2 724 aa25.93■■□□□ 1.74
HDAC6-202ENST00000376610 LTV1Q96GA3 475 aaPredicted RBP25.91■■□□□ 1.74
HDAC6-202ENST00000376610 CASZ1Q86V15 1759 aa25.9■■□□□ 1.74
HDAC6-202ENST00000376610 TMF1P82094 1093 aa25.9■■□□□ 1.74
HDAC6-202ENST00000376610 AMPHP49418 695 aa25.89■■□□□ 1.74
HDAC6-202ENST00000376610 ANKRD36BQ8N2N9 1353 aa25.89■■□□□ 1.74
HDAC6-202ENST00000376610 SLC15A2Q16348 729 aa25.88■■□□□ 1.73
HDAC6-202ENST00000376610 USP47Q96K76 1375 aa25.87■■□□□ 1.73
HDAC6-202ENST00000376610 BTAF1O14981 1849 aa25.86■■□□□ 1.73
HDAC6-202ENST00000376610 MAP3K19Q56UN5 1328 aa25.86■■□□□ 1.73
HDAC6-202ENST00000376610 ZBTB7AO95365 584 aa25.85■■□□□ 1.73
HDAC6-202ENST00000376610 CDCA8Q53HL2 280 aa25.85■■□□□ 1.73
HDAC6-202ENST00000376610 HOXC9P31274 260 aa25.84■■□□□ 1.73
HDAC6-202ENST00000376610 DDX54Q8TDD1 881 aaKnown RBP25.84■■□□□ 1.73
HDAC6-202ENST00000376610 PDGFDQ9GZP0 370 aaPredicted RBP25.82■■□□□ 1.72
HDAC6-202ENST00000376610 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
HDAC6-202ENST00000376610 ATF5Q9Y2D1 282 aaPredicted RBP25.8■■□□□ 1.72
HDAC6-202ENST00000376610 MTFR1LQ9H019 292 aa25.79■■□□□ 1.72
HDAC6-202ENST00000376610 SMG6Q86US8 1419 aaKnown RBP25.79■■□□□ 1.72
HDAC6-202ENST00000376610 FBLN1P23142 703 aa25.78■■□□□ 1.72
HDAC6-202ENST00000376610 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
HDAC6-202ENST00000376610 FYB1O15117 783 aa25.77■■□□□ 1.72
HDAC6-202ENST00000376610 YY1P25490 414 aa25.77■■□□□ 1.72
HDAC6-202ENST00000376610 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
HDAC6-202ENST00000376610 PTGER2P43116 358 aa25.76■■□□□ 1.71
HDAC6-202ENST00000376610 ZCRB1Q8TBF4 217 aaKnown RBP25.76■■□□□ 1.71
HDAC6-202ENST00000376610 SYTL4Q96C24 671 aaPredicted RBP25.76■■□□□ 1.71
HDAC6-202ENST00000376610 MYOM1P52179 1685 aa25.76■■□□□ 1.71
HDAC6-202ENST00000376610 RGPD2P0DJD1 1756 aa25.76■■□□□ 1.71
HDAC6-202ENST00000376610 KIF20BQ96Q89 1820 aa25.75■■□□□ 1.71
HDAC6-202ENST00000376610 PAPPAQ13219 1627 aa25.75■■□□□ 1.71
HDAC6-202ENST00000376610 SLC27A3Q5K4L6 730 aa25.74■■□□□ 1.71
HDAC6-202ENST00000376610 TIMELESSQ9UNS1 1208 aa25.73■■□□□ 1.71
HDAC6-202ENST00000376610 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
HDAC6-202ENST00000376610 RAPGEF4Q8WZA2 1011 aa25.72■■□□□ 1.71
HDAC6-202ENST00000376610 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms