RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.8
NELFE-201ENST00000375425 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
NELFE-201ENST00000375425 PSDA5PKW4 1024 aaPredicted RBP20.07■□□□□ 0.8
NELFE-201ENST00000375425 CAMKK2Q96RR4 588 aa20.07■□□□□ 0.8
NELFE-201ENST00000375425 USP31Q70CQ4 1352 aa20.06■□□□□ 0.8
NELFE-201ENST00000375425 SLC24A1O60721 1099 aa20.06■□□□□ 0.8
NELFE-201ENST00000375425 CSB-PGBD3P0DP91 1061 aa20.06■□□□□ 0.8
NELFE-201ENST00000375425 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
NELFE-201ENST00000375425 DDB1Q16531 1140 aa20.05■□□□□ 0.8
NELFE-201ENST00000375425 COL18A1P39060 1754 aa20.05■□□□□ 0.8
NELFE-201ENST00000375425 CARD10Q9BWT7 1032 aa20.04■□□□□ 0.8
NELFE-201ENST00000375425 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
NELFE-201ENST00000375425 NFAT5O94916 1531 aa20.03■□□□□ 0.8
NELFE-201ENST00000375425 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
NELFE-201ENST00000375425 CDCA7Q9BWT1 371 aaPredicted RBP20.02■□□□□ 0.8
NELFE-201ENST00000375425 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.79
NELFE-201ENST00000375425 EDC4Q6P2E9 1401 aaKnown RBP20.01■□□□□ 0.79
NELFE-201ENST00000375425 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
NELFE-201ENST00000375425 TNS1Q9HBL0 1735 aaKnown RBP20■□□□□ 0.79
NELFE-201ENST00000375425 MARCH10Q8NA82 808 aaPredicted RBP19.99■□□□□ 0.79
NELFE-201ENST00000375425 PARP4Q9UKK3 1724 aaKnown RBP19.99■□□□□ 0.79
NELFE-201ENST00000375425 OVOS2A0A0G2JMS6 1433 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 OVOS2A0A0J9YW53 1432 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 OVOS2Q6IE36 1432 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 EXOC5O00471 708 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
NELFE-201ENST00000375425 USP47Q96K76 1375 aa19.96■□□□□ 0.79
NELFE-201ENST00000375425 TMF1P82094 1093 aa19.96■□□□□ 0.79
NELFE-201ENST00000375425 NLRP2Q9NX02 1062 aa19.96■□□□□ 0.79
NELFE-201ENST00000375425 ERBB3P21860 1342 aa19.96■□□□□ 0.79
NELFE-201ENST00000375425 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
NELFE-201ENST00000375425 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
NELFE-201ENST00000375425 RGPD5Q99666 1765 aa19.95■□□□□ 0.78
NELFE-201ENST00000375425 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
NELFE-201ENST00000375425 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
NELFE-201ENST00000375425 COG3Q96JB2 828 aa19.93■□□□□ 0.78
NELFE-201ENST00000375425 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
NELFE-201ENST00000375425 ABCC6O95255 1503 aa19.93■□□□□ 0.78
NELFE-201ENST00000375425 PLSCR1O15162 318 aa19.93■□□□□ 0.78
NELFE-201ENST00000375425 NBPF14Q5TI25 921 aa19.93■□□□□ 0.78
NELFE-201ENST00000375425 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
NELFE-201ENST00000375425 IP6K1Q92551 441 aa19.92■□□□□ 0.78
NELFE-201ENST00000375425 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
NELFE-201ENST00000375425 FBLN1P23142 703 aa19.91■□□□□ 0.78
NELFE-201ENST00000375425 PEAK1Q9H792 1746 aa19.91■□□□□ 0.78
NELFE-201ENST00000375425 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
NELFE-201ENST00000375425 ANKRD36BQ8N2N9 1353 aa19.9■□□□□ 0.78
NELFE-201ENST00000375425 BCL9O00512 1426 aa19.9■□□□□ 0.78
NELFE-201ENST00000375425 IL2RBP14784 551 aa19.9■□□□□ 0.78
NELFE-201ENST00000375425 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
NELFE-201ENST00000375425 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
NELFE-201ENST00000375425 FYB1O15117 783 aa19.88■□□□□ 0.77
NELFE-201ENST00000375425 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
NELFE-201ENST00000375425 MAP3K19Q56UN5 1328 aa19.87■□□□□ 0.77
NELFE-201ENST00000375425 AMPHP49418 695 aa19.86■□□□□ 0.77
NELFE-201ENST00000375425 PROM2Q8N271 834 aa19.86■□□□□ 0.77
NELFE-201ENST00000375425 KCNQ2O43526 872 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 HOXC9P31274 260 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 LRP5O75197 1615 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 LTN1O94822 1766 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 WNK3Q9BYP7 1800 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
NELFE-201ENST00000375425 RRS1Q15050 365 aaKnown RBP19.84■□□□□ 0.77
NELFE-201ENST00000375425 ACSBG1Q96GR2 724 aa19.84■□□□□ 0.77
NELFE-201ENST00000375425 RREB1Q92766 1687 aa19.83■□□□□ 0.77
NELFE-201ENST00000375425 SBF2Q86WG5 1849 aa19.83■□□□□ 0.76
NELFE-201ENST00000375425 NUP188Q5SRE5 1749 aa19.81■□□□□ 0.76
NELFE-201ENST00000375425 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
NELFE-201ENST00000375425 TXNRD1Q16881 649 aa19.8■□□□□ 0.76
NELFE-201ENST00000375425 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
NELFE-201ENST00000375425 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
NELFE-201ENST00000375425 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
NELFE-201ENST00000375425 NBPF6Q5VWK0 638 aa19.76■□□□□ 0.75
NELFE-201ENST00000375425 NBPF4Q96M43 638 aa19.76■□□□□ 0.75
NELFE-201ENST00000375425 SPON1Q9HCB6 807 aa19.76■□□□□ 0.75
NELFE-201ENST00000375425 HSP90AB2PQ58FF8 381 aa19.75■□□□□ 0.75
NELFE-201ENST00000375425 RTL1A6NKG5 1358 aa19.75■□□□□ 0.75
NELFE-201ENST00000375425 RGPD3A6NKT7 1758 aaPredicted RBP19.74■□□□□ 0.75
NELFE-201ENST00000375425 RGPD4Q7Z3J3 1758 aa19.74■□□□□ 0.75
NELFE-201ENST00000375425 NSD3Q9BZ95 1437 aa19.74■□□□□ 0.75
NELFE-201ENST00000375425 ZCRB1Q8TBF4 217 aaKnown RBP19.74■□□□□ 0.75
NELFE-201ENST00000375425 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
NELFE-201ENST00000375425 PDGFDQ9GZP0 370 aaPredicted RBP19.74■□□□□ 0.75
NELFE-201ENST00000375425 STK32BQ9NY57 414 aa19.74■□□□□ 0.75
NELFE-201ENST00000375425 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
NELFE-201ENST00000375425 USHBP1Q8N6Y0 703 aa19.73■□□□□ 0.75
NELFE-201ENST00000375425 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.75
NELFE-201ENST00000375425 INSRP06213 1382 aa19.71■□□□□ 0.75
NELFE-201ENST00000375425 PPP1R1BQ9UD71 204 aaPredicted RBP19.71■□□□□ 0.75
NELFE-201ENST00000375425 SMG6Q86US8 1419 aaKnown RBP19.69■□□□□ 0.74
NELFE-201ENST00000375425 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
NELFE-201ENST00000375425 PRIM1P49642 420 aaKnown RBP19.69■□□□□ 0.74
NELFE-201ENST00000375425 RAPGEF4Q8WZA2 1011 aa19.69■□□□□ 0.74
NELFE-201ENST00000375425 SYTL4Q96C24 671 aaPredicted RBP19.69■□□□□ 0.74
NELFE-201ENST00000375425 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
NELFE-201ENST00000375425 NHSQ6T4R5 1651 aa19.69■□□□□ 0.74
NELFE-201ENST00000375425 FAM208AQ9UK61 1670 aaKnown RBP19.69■□□□□ 0.74
NELFE-201ENST00000375425 FLT4P35916 1363 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms