RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 STRN4Q9NRL3 753 aa29.64■■■□□ 2.34
XPA-201ENST00000375128 AXIN2Q9Y2T1 843 aa29.64■■■□□ 2.34
XPA-201ENST00000375128 CAMTA1Q9Y6Y1 1673 aa29.64■■■□□ 2.34
XPA-201ENST00000375128 MAP2P11137 1827 aaKnown RBP29.64■■■□□ 2.33
XPA-201ENST00000375128 RGPD5Q99666 1765 aa29.63■■■□□ 2.33
XPA-201ENST00000375128 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
XPA-201ENST00000375128 TRPC5Q9UL62 973 aaPredicted RBP29.62■■■□□ 2.33
XPA-201ENST00000375128 NRAPQ86VF7 1730 aa29.62■■■□□ 2.33
XPA-201ENST00000375128 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.62■■■□□ 2.33
XPA-201ENST00000375128 POTEAQ6S8J7 498 aa29.61■■■□□ 2.33
XPA-201ENST00000375128 CCDC9Q9Y3X0 531 aaKnown RBP29.61■■■□□ 2.33
XPA-201ENST00000375128 PPM1GO15355 546 aaPredicted RBP29.6■■■□□ 2.33
XPA-201ENST00000375128 EMILIN1Q9Y6C2 1016 aa29.6■■■□□ 2.33
XPA-201ENST00000375128 IP6K1Q92551 441 aa29.59■■■□□ 2.33
XPA-201ENST00000375128 HOXC9P31274 260 aa29.58■■■□□ 2.33
XPA-201ENST00000375128 ABCC6O95255 1503 aa29.58■■■□□ 2.33
XPA-201ENST00000375128 POLKQ9UBT6 870 aa29.57■■■□□ 2.32
XPA-201ENST00000375128 COL5A2P05997 1499 aaPredicted RBP29.57■■■□□ 2.32
XPA-201ENST00000375128 ATRNO75882 1429 aa29.56■■■□□ 2.32
XPA-201ENST00000375128 VPS72Q15906 364 aa29.56■■■□□ 2.32
XPA-201ENST00000375128 CSB-PGBD3P0DP91 1061 aa29.55■■■□□ 2.32
XPA-201ENST00000375128 RTL1A6NKG5 1358 aa29.54■■■□□ 2.32
XPA-201ENST00000375128 LARP1Q6PKG0 1096 aaKnown RBP29.54■■■□□ 2.32
XPA-201ENST00000375128 LTV1Q96GA3 475 aaPredicted RBP29.54■■■□□ 2.32
XPA-201ENST00000375128 PEAK1Q9H792 1746 aa29.54■■■□□ 2.32
XPA-201ENST00000375128 BLMP54132 1417 aaPredicted RBP29.53■■■□□ 2.32
XPA-201ENST00000375128 FLT4P35916 1363 aa29.53■■■□□ 2.32
XPA-201ENST00000375128 GJD4Q96KN9 370 aaPredicted RBP29.53■■■□□ 2.32
XPA-201ENST00000375128 KIF24Q5T7B8 1368 aa29.52■■■□□ 2.32
XPA-201ENST00000375128 RXRBP28702 533 aa29.52■■■□□ 2.32
XPA-201ENST00000375128 HSP90AB2PQ58FF8 381 aa29.52■■■□□ 2.32
XPA-201ENST00000375128 TOM1L2Q6ZVM7 507 aa29.52■■■□□ 2.32
XPA-201ENST00000375128 ANKRD24Q8TF21 1146 aa29.52■■■□□ 2.32
XPA-201ENST00000375128 RBM6P78332 1123 aaKnown RBP29.51■■■□□ 2.31
XPA-201ENST00000375128 USP35Q9P2H5 1018 aa29.5■■■□□ 2.31
XPA-201ENST00000375128 WDR17Q8IZU2 1322 aa29.5■■■□□ 2.31
XPA-201ENST00000375128 ERBB3P21860 1342 aa29.49■■■□□ 2.31
XPA-201ENST00000375128 SPATA31A5Q5VU36 1347 aa29.48■■■□□ 2.31
XPA-201ENST00000375128 SPATA31A7Q8IWB4 1347 aa29.48■■■□□ 2.31
XPA-201ENST00000375128 INSRP06213 1382 aa29.47■■■□□ 2.31
XPA-201ENST00000375128 CRB1P82279 1406 aa29.47■■■□□ 2.31
XPA-201ENST00000375128 MTHFSP49914 203 aa29.46■■■□□ 2.31
XPA-201ENST00000375128 NLRP2Q9NX02 1062 aa29.45■■■□□ 2.31
XPA-201ENST00000375128 SPATA31A1Q5TZJ5 1347 aa29.45■■■□□ 2.31
XPA-201ENST00000375128 GLI3P10071 1580 aa29.45■■■□□ 2.31
XPA-201ENST00000375128 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
XPA-201ENST00000375128 PARD3Q8TEW0 1356 aa29.44■■■□□ 2.3
XPA-201ENST00000375128 PPP2R1AP30153 589 aa29.43■■■□□ 2.3
XPA-201ENST00000375128 RALBP1Q15311 655 aa29.41■■■□□ 2.3
XPA-201ENST00000375128 FAM98CQ17RN3 349 aaKnown RBP29.41■■■□□ 2.3
XPA-201ENST00000375128 TCP11L2Q8N4U5 519 aa29.41■■■□□ 2.3
XPA-201ENST00000375128 CDK12Q9NYV4 1490 aaPredicted RBP29.41■■■□□ 2.3
XPA-201ENST00000375128 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
XPA-201ENST00000375128 RGPD2P0DJD1 1756 aa29.4■■■□□ 2.3
XPA-201ENST00000375128 FAM208AQ9UK61 1670 aaKnown RBP29.39■■■□□ 2.3
XPA-201ENST00000375128 A0A0G2JS52 829 aa29.38■■■□□ 2.29
XPA-201ENST00000375128 MYT1Q01538 1121 aa29.38■■■□□ 2.29
XPA-201ENST00000375128 THRAP3Q9Y2W1 955 aaKnown RBP29.37■■■□□ 2.29
XPA-201ENST00000375128 EIF4A2Q14240 407 aaKnown RBP29.37■■■□□ 2.29
XPA-201ENST00000375128 NBPF6Q5VWK0 638 aa29.36■■■□□ 2.29
XPA-201ENST00000375128 NBPF4Q96M43 638 aa29.36■■■□□ 2.29
XPA-201ENST00000375128 BARGINQ6ZT62 677 aa29.35■■■□□ 2.29
XPA-201ENST00000375128 PRKRIP1Q9H875 184 aaPredicted RBP29.35■■■□□ 2.29
XPA-201ENST00000375128 USHBP1Q8N6Y0 703 aa29.33■■■□□ 2.29
XPA-201ENST00000375128 CFAP53Q96M91 514 aa29.33■■■□□ 2.29
XPA-201ENST00000375128 RGS12O14924 1447 aa29.32■■■□□ 2.28
XPA-201ENST00000375128 ONECUT3O60422 494 aaPredicted RBP29.32■■■□□ 2.28
XPA-201ENST00000375128 SEPT12Q8IYM1 358 aa29.32■■■□□ 2.28
XPA-201ENST00000375128 ILDR2Q71H61 639 aa29.3■■■□□ 2.28
XPA-201ENST00000375128 EYA1Q99502 592 aa29.3■■■□□ 2.28
XPA-201ENST00000375128 MYBBP1AQ9BQG0 1328 aaKnown RBP29.3■■■□□ 2.28
XPA-201ENST00000375128 DIAPH1O60610 1272 aaKnown RBP29.29■■■□□ 2.28
XPA-201ENST00000375128 ANP32CO43423 234 aa29.28■■■□□ 2.28
XPA-201ENST00000375128 IL13P35225 146 aa29.28■■■□□ 2.28
XPA-201ENST00000375128 WNK3Q9BYP7 1800 aa29.28■■■□□ 2.28
XPA-201ENST00000375128 IL2RBP14784 551 aa29.27■■■□□ 2.28
XPA-201ENST00000375128 CDCA7Q9BWT1 371 aaPredicted RBP29.27■■■□□ 2.28
XPA-201ENST00000375128 THSD7AQ9UPZ6 1657 aa29.26■■■□□ 2.27
XPA-201ENST00000375128 COL3A1P02461 1466 aaPredicted RBP29.24■■■□□ 2.27
XPA-201ENST00000375128 BRWD3Q6RI45 1802 aa29.24■■■□□ 2.27
XPA-201ENST00000375128 RAPGEF4Q8WZA2 1011 aa29.22■■■□□ 2.27
XPA-201ENST00000375128 DISP2A7MBM2 1401 aa29.22■■■□□ 2.27
XPA-201ENST00000375128 U2SURPO15042 1029 aaKnown RBP29.21■■■□□ 2.27
XPA-201ENST00000375128 DDB1Q16531 1140 aa29.21■■■□□ 2.27
XPA-201ENST00000375128 IGSF1Q8N6C5 1336 aa29.21■■■□□ 2.27
XPA-201ENST00000375128 PARP4Q9UKK3 1724 aaKnown RBP29.21■■■□□ 2.27
XPA-201ENST00000375128 EXOC5O00471 708 aa29.2■■■□□ 2.26
XPA-201ENST00000375128 PDE3BQ13370 1112 aa29.2■■■□□ 2.26
XPA-201ENST00000375128 TATP17735 454 aaPredicted RBP29.19■■■□□ 2.26
XPA-201ENST00000375128 SULT6B1Q6IMI4 303 aa29.19■■■□□ 2.26
XPA-201ENST00000375128 KRT27Q7Z3Y8 459 aa29.19■■■□□ 2.26
XPA-201ENST00000375128 NUDCQ9Y266 331 aa29.19■■■□□ 2.26
XPA-201ENST00000375128 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
XPA-201ENST00000375128 NCAPD2Q15021 1401 aa29.18■■■□□ 2.26
XPA-201ENST00000375128 LRRC37A3O60309 1634 aa29.18■■■□□ 2.26
XPA-201ENST00000375128 MEGF6O75095 1541 aa29.17■■■□□ 2.26
XPA-201ENST00000375128 HMOX1P09601 288 aa29.16■■■□□ 2.26
XPA-201ENST00000375128 AEBP1Q8IUX7 1158 aa29.16■■■□□ 2.26
XPA-201ENST00000375128 FAM182BQ5T319 152 aa29.12■■■□□ 2.25
XPA-201ENST00000375128 OVOS2A0A0G2JMS6 1433 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms