RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
HSPG2-202ENST00000374676 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
HSPG2-202ENST00000374676 AXIN2Q9Y2T1 843 aa15.46■□□□□ 0.07
HSPG2-202ENST00000374676 RGPD5Q99666 1765 aa15.46■□□□□ 0.07
HSPG2-202ENST00000374676 AMPHP49418 695 aa15.45■□□□□ 0.06
HSPG2-202ENST00000374676 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
HSPG2-202ENST00000374676 RTL1A6NKG5 1358 aa15.45■□□□□ 0.06
HSPG2-202ENST00000374676 NRAPQ86VF7 1730 aa15.45■□□□□ 0.06
HSPG2-202ENST00000374676 HOXC9P31274 260 aa15.44■□□□□ 0.06
HSPG2-202ENST00000374676 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-202ENST00000374676 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
HSPG2-202ENST00000374676 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-202ENST00000374676 EVA1CP58658 441 aa15.43■□□□□ 0.06
HSPG2-202ENST00000374676 VPS72Q15906 364 aa15.43■□□□□ 0.06
HSPG2-202ENST00000374676 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
HSPG2-202ENST00000374676 ATRNO75882 1429 aa15.43■□□□□ 0.06
HSPG2-202ENST00000374676 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-202ENST00000374676 COL5A2P05997 1499 aaPredicted RBP15.42■□□□□ 0.06
HSPG2-202ENST00000374676 FLT4P35916 1363 aa15.42■□□□□ 0.06
HSPG2-202ENST00000374676 PEAK1Q9H792 1746 aa15.41■□□□□ 0.06
HSPG2-202ENST00000374676 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-202ENST00000374676 POTEAQ6S8J7 498 aa15.41■□□□□ 0.06
HSPG2-202ENST00000374676 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
HSPG2-202ENST00000374676 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
HSPG2-202ENST00000374676 INSRP06213 1382 aa15.4■□□□□ 0.06
HSPG2-202ENST00000374676 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
HSPG2-202ENST00000374676 RALBP1Q15311 655 aa15.4■□□□□ 0.06
HSPG2-202ENST00000374676 ERBB3P21860 1342 aa15.4■□□□□ 0.06
HSPG2-202ENST00000374676 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
HSPG2-202ENST00000374676 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
HSPG2-202ENST00000374676 HSP90AB2PQ58FF8 381 aa15.39■□□□□ 0.05
HSPG2-202ENST00000374676 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
HSPG2-202ENST00000374676 ANKRD24Q8TF21 1146 aa15.39■□□□□ 0.05
HSPG2-202ENST00000374676 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-202ENST00000374676 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
HSPG2-202ENST00000374676 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
HSPG2-202ENST00000374676 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
HSPG2-202ENST00000374676 PPP2R1AP30153 589 aa15.38■□□□□ 0.05
HSPG2-202ENST00000374676 MTHFSP49914 203 aa15.38■□□□□ 0.05
HSPG2-202ENST00000374676 CRB1P82279 1406 aa15.37■□□□□ 0.05
HSPG2-202ENST00000374676 CSB-PGBD3P0DP91 1061 aa15.37■□□□□ 0.05
HSPG2-202ENST00000374676 RXRBP28702 533 aa15.37■□□□□ 0.05
HSPG2-202ENST00000374676 CARD10Q9BWT7 1032 aa15.37■□□□□ 0.05
HSPG2-202ENST00000374676 CDK12Q9NYV4 1490 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-202ENST00000374676 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
HSPG2-202ENST00000374676 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
HSPG2-202ENST00000374676 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
HSPG2-202ENST00000374676 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
HSPG2-202ENST00000374676 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
HSPG2-202ENST00000374676 ONECUT3O60422 494 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-202ENST00000374676 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-202ENST00000374676 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
HSPG2-202ENST00000374676 GLI3P10071 1580 aa15.35■□□□□ 0.05
HSPG2-202ENST00000374676 TCP11L2Q8N4U5 519 aa15.34■□□□□ 0.05
HSPG2-202ENST00000374676 NLRP2Q9NX02 1062 aa15.34■□□□□ 0.05
HSPG2-202ENST00000374676 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
HSPG2-202ENST00000374676 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
HSPG2-202ENST00000374676 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
HSPG2-202ENST00000374676 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
HSPG2-202ENST00000374676 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
HSPG2-202ENST00000374676 IL13P35225 146 aa15.31■□□□□ 0.04
HSPG2-202ENST00000374676 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
HSPG2-202ENST00000374676 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
HSPG2-202ENST00000374676 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
HSPG2-202ENST00000374676 ANP32CO43423 234 aa15.3■□□□□ 0.04
HSPG2-202ENST00000374676 DIAPH1O60610 1272 aaKnown RBP15.3■□□□□ 0.04
HSPG2-202ENST00000374676 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
HSPG2-202ENST00000374676 EYA1Q99502 592 aa15.3■□□□□ 0.04
HSPG2-202ENST00000374676 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-202ENST00000374676 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-202ENST00000374676 NCAPD2Q15021 1401 aa15.28■□□□□ 0.04
HSPG2-202ENST00000374676 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
HSPG2-202ENST00000374676 WNK3Q9BYP7 1800 aa15.27■□□□□ 0.04
HSPG2-202ENST00000374676 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
HSPG2-202ENST00000374676 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
HSPG2-202ENST00000374676 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
HSPG2-202ENST00000374676 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
HSPG2-202ENST00000374676 IL2RBP14784 551 aa15.26■□□□□ 0.03
HSPG2-202ENST00000374676 PARP4Q9UKK3 1724 aaKnown RBP15.26■□□□□ 0.03
HSPG2-202ENST00000374676 RGS12O14924 1447 aa15.26■□□□□ 0.03
HSPG2-202ENST00000374676 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
HSPG2-202ENST00000374676 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
HSPG2-202ENST00000374676 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
HSPG2-202ENST00000374676 KDRP35968 1356 aa15.24■□□□□ 0.03
HSPG2-202ENST00000374676 EXOC5O00471 708 aa15.23■□□□□ 0.03
HSPG2-202ENST00000374676 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
HSPG2-202ENST00000374676 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
HSPG2-202ENST00000374676 A0A0G2JS52 829 aa15.22■□□□□ 0.03
HSPG2-202ENST00000374676 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-202ENST00000374676 MYT1Q01538 1121 aa15.22■□□□□ 0.03
HSPG2-202ENST00000374676 DDB1Q16531 1140 aa15.22■□□□□ 0.03
HSPG2-202ENST00000374676 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
HSPG2-202ENST00000374676 OVOS2A0A0G2JMS6 1433 aa15.21■□□□□ 0.03
HSPG2-202ENST00000374676 U2SURPO15042 1029 aaKnown RBP15.21■□□□□ 0.03
HSPG2-202ENST00000374676 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.03
HSPG2-202ENST00000374676 ILDR2Q71H61 639 aa15.21■□□□□ 0.03
HSPG2-202ENST00000374676 KRT27Q7Z3Y8 459 aa15.21■□□□□ 0.03
HSPG2-202ENST00000374676 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
HSPG2-202ENST00000374676 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
HSPG2-202ENST00000374676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms