RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
PFDN6-201ENST00000374606 SSH2Q76I76 1423 aa23.82■■□□□ 1.4
PFDN6-201ENST00000374606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
PFDN6-201ENST00000374606 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
PFDN6-201ENST00000374606 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
PFDN6-201ENST00000374606 PRDM11Q9NQV5 511 aa23.8■■□□□ 1.4
PFDN6-201ENST00000374606 TTC21BQ7Z4L5 1316 aa23.8■■□□□ 1.4
PFDN6-201ENST00000374606 MIER1Q8N108 512 aa23.79■■□□□ 1.4
PFDN6-201ENST00000374606 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
PFDN6-201ENST00000374606 RALBP1Q15311 655 aa23.78■■□□□ 1.4
PFDN6-201ENST00000374606 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
PFDN6-201ENST00000374606 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
PFDN6-201ENST00000374606 EZH2Q15910 746 aaKnown RBP23.76■■□□□ 1.39
PFDN6-201ENST00000374606 FYB1O15117 783 aa23.75■■□□□ 1.39
PFDN6-201ENST00000374606 NME9Q86XW9 330 aa23.75■■□□□ 1.39
PFDN6-201ENST00000374606 GGNBP2Q9H3C7 697 aa23.75■■□□□ 1.39
PFDN6-201ENST00000374606 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
PFDN6-201ENST00000374606 USP54Q70EL1 1684 aa23.74■■□□□ 1.39
PFDN6-201ENST00000374606 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
PFDN6-201ENST00000374606 TRIM37O94972 964 aa23.73■■□□□ 1.39
PFDN6-201ENST00000374606 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
PFDN6-201ENST00000374606 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
PFDN6-201ENST00000374606 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
PFDN6-201ENST00000374606 OVOS2A0A0J9YW53 1432 aa23.72■■□□□ 1.39
PFDN6-201ENST00000374606 OVOS2Q6IE36 1432 aa23.72■■□□□ 1.39
PFDN6-201ENST00000374606 PHRF1Q9P1Y6 1649 aaKnown RBP23.71■■□□□ 1.39
PFDN6-201ENST00000374606 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
PFDN6-201ENST00000374606 COG3Q96JB2 828 aa23.7■■□□□ 1.38
PFDN6-201ENST00000374606 STRN4Q9NRL3 753 aa23.7■■□□□ 1.38
PFDN6-201ENST00000374606 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
PFDN6-201ENST00000374606 CHRNA2Q15822 529 aa23.69■■□□□ 1.38
PFDN6-201ENST00000374606 APBA3O96018 575 aa23.68■■□□□ 1.38
PFDN6-201ENST00000374606 RREB1Q92766 1687 aa23.67■■□□□ 1.38
PFDN6-201ENST00000374606 ABTB2Q8N961 1025 aa23.67■■□□□ 1.38
PFDN6-201ENST00000374606 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
PFDN6-201ENST00000374606 PPP2R1AP30153 589 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.37
PFDN6-201ENST00000374606 NLRP6P59044 892 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
PFDN6-201ENST00000374606 PDE3BQ13370 1112 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 BARGINQ6ZT62 677 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 USP35Q9P2H5 1018 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.37
PFDN6-201ENST00000374606 NLRP13Q86W25 1043 aa23.63■■□□□ 1.37
PFDN6-201ENST00000374606 EVA1CP58658 441 aa23.62■■□□□ 1.37
PFDN6-201ENST00000374606 NBPF14Q5TI25 921 aa23.62■■□□□ 1.37
PFDN6-201ENST00000374606 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
PFDN6-201ENST00000374606 SLIT3O75094 1523 aa23.59■■□□□ 1.37
PFDN6-201ENST00000374606 YY1P25490 414 aa23.59■■□□□ 1.37
PFDN6-201ENST00000374606 AATKQ6ZMQ8 1374 aa23.59■■□□□ 1.37
PFDN6-201ENST00000374606 TCP11L2Q8N4U5 519 aa23.58■■□□□ 1.37
PFDN6-201ENST00000374606 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
PFDN6-201ENST00000374606 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
PFDN6-201ENST00000374606 MRS2Q9HD23 443 aa23.57■■□□□ 1.36
PFDN6-201ENST00000374606 LMO7Q8WWI1 1683 aa23.57■■□□□ 1.36
PFDN6-201ENST00000374606 USP19O94966 1318 aa23.57■■□□□ 1.36
PFDN6-201ENST00000374606 CPDO75976 1380 aa23.56■■□□□ 1.36
PFDN6-201ENST00000374606 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
PFDN6-201ENST00000374606 SMG6Q86US8 1419 aaKnown RBP23.56■■□□□ 1.36
PFDN6-201ENST00000374606 NFAT5O94916 1531 aa23.55■■□□□ 1.36
PFDN6-201ENST00000374606 SOX12O15370 315 aa23.54■■□□□ 1.36
PFDN6-201ENST00000374606 SPON1Q9HCB6 807 aa23.54■■□□□ 1.36
PFDN6-201ENST00000374606 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
PFDN6-201ENST00000374606 THRAP3Q9Y2W1 955 aaKnown RBP23.54■■□□□ 1.36
PFDN6-201ENST00000374606 PARP4Q9UKK3 1724 aaKnown RBP23.53■■□□□ 1.36
PFDN6-201ENST00000374606 CCDC184Q52MB2 194 aa23.53■■□□□ 1.36
PFDN6-201ENST00000374606 KCNH5Q8NCM2 988 aa23.53■■□□□ 1.36
PFDN6-201ENST00000374606 LTN1O94822 1766 aa23.52■■□□□ 1.36
PFDN6-201ENST00000374606 MTHFSP49914 203 aa23.51■■□□□ 1.35
PFDN6-201ENST00000374606 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
PFDN6-201ENST00000374606 KCNQ2O43526 872 aa23.5■■□□□ 1.35
PFDN6-201ENST00000374606 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
PFDN6-201ENST00000374606 FBLN1P23142 703 aa23.49■■□□□ 1.35
PFDN6-201ENST00000374606 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
PFDN6-201ENST00000374606 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
PFDN6-201ENST00000374606 PEAK1Q9H792 1746 aa23.49■■□□□ 1.35
PFDN6-201ENST00000374606 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
PFDN6-201ENST00000374606 EMILIN1Q9Y6C2 1016 aa23.48■■□□□ 1.35
PFDN6-201ENST00000374606 RGPD3A6NKT7 1758 aaPredicted RBP23.47■■□□□ 1.35
PFDN6-201ENST00000374606 RGPD4Q7Z3J3 1758 aa23.47■■□□□ 1.35
PFDN6-201ENST00000374606 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
PFDN6-201ENST00000374606 GCP02774 474 aa23.47■■□□□ 1.35
PFDN6-201ENST00000374606 MAP3K19Q56UN5 1328 aa23.47■■□□□ 1.35
PFDN6-201ENST00000374606 OVOS2A0A0G2JMS6 1433 aa23.47■■□□□ 1.35
PFDN6-201ENST00000374606 COL3A1P02461 1466 aaPredicted RBP23.47■■□□□ 1.35
PFDN6-201ENST00000374606 CRB1P82279 1406 aa23.45■■□□□ 1.34
PFDN6-201ENST00000374606 RTL1A6NKG5 1358 aa23.45■■□□□ 1.34
PFDN6-201ENST00000374606 FLT4P35916 1363 aa23.45■■□□□ 1.34
PFDN6-201ENST00000374606 KIF24Q5T7B8 1368 aa23.45■■□□□ 1.34
PFDN6-201ENST00000374606 INSRP06213 1382 aa23.42■■□□□ 1.34
PFDN6-201ENST00000374606 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
PFDN6-201ENST00000374606 AMPHP49418 695 aa23.42■■□□□ 1.34
PFDN6-201ENST00000374606 SBF2Q86WG5 1849 aa23.42■■□□□ 1.34
PFDN6-201ENST00000374606 ABCC6O95255 1503 aa23.41■■□□□ 1.34
PFDN6-201ENST00000374606 ZBTB7CA1YPR0 619 aa23.4■■□□□ 1.34
PFDN6-201ENST00000374606 PLSCR1O15162 318 aa23.4■■□□□ 1.34
PFDN6-201ENST00000374606 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
PFDN6-201ENST00000374606 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.33
PFDN6-201ENST00000374606 DDB1Q16531 1140 aa23.39■■□□□ 1.33
PFDN6-201ENST00000374606 ARHGEF25Q86VW2 580 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms