RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
TCEA3-201ENST00000374601 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
TCEA3-201ENST00000374601 ZC3H6P61129 1189 aaKnown RBP18.91■□□□□ 0.62
TCEA3-201ENST00000374601 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
TCEA3-201ENST00000374601 NWD2Q9ULI1 1742 aa18.9■□□□□ 0.62
TCEA3-201ENST00000374601 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
TCEA3-201ENST00000374601 HOXC9P31274 260 aa18.89■□□□□ 0.61
TCEA3-201ENST00000374601 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
TCEA3-201ENST00000374601 ILDR2Q71H61 639 aa18.89■□□□□ 0.61
TCEA3-201ENST00000374601 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
TCEA3-201ENST00000374601 AMPHP49418 695 aa18.88■□□□□ 0.61
TCEA3-201ENST00000374601 SPATA31A6Q5VVP1 1343 aa18.88■□□□□ 0.61
TCEA3-201ENST00000374601 BLMP54132 1417 aaPredicted RBP18.88■□□□□ 0.61
TCEA3-201ENST00000374601 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
TCEA3-201ENST00000374601 HSP90AB2PQ58FF8 381 aa18.87■□□□□ 0.61
TCEA3-201ENST00000374601 IP6K1Q92551 441 aa18.87■□□□□ 0.61
TCEA3-201ENST00000374601 CHRNA2Q15822 529 aa18.86■□□□□ 0.61
TCEA3-201ENST00000374601 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
TCEA3-201ENST00000374601 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
TCEA3-201ENST00000374601 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
TCEA3-201ENST00000374601 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
TCEA3-201ENST00000374601 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
TCEA3-201ENST00000374601 AXIN2Q9Y2T1 843 aa18.84■□□□□ 0.61
TCEA3-201ENST00000374601 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
TCEA3-201ENST00000374601 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.61
TCEA3-201ENST00000374601 FAM83GA6ND36 823 aa18.83■□□□□ 0.6
TCEA3-201ENST00000374601 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
TCEA3-201ENST00000374601 ADAMTS2O95450 1211 aa18.82■□□□□ 0.6
TCEA3-201ENST00000374601 IL13P35225 146 aa18.82■□□□□ 0.6
TCEA3-201ENST00000374601 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
TCEA3-201ENST00000374601 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
TCEA3-201ENST00000374601 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
TCEA3-201ENST00000374601 SLIT2O94813 1529 aa18.8■□□□□ 0.6
TCEA3-201ENST00000374601 ERBB3P21860 1342 aa18.79■□□□□ 0.6
TCEA3-201ENST00000374601 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
TCEA3-201ENST00000374601 NCAPD2Q15021 1401 aa18.78■□□□□ 0.6
TCEA3-201ENST00000374601 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
TCEA3-201ENST00000374601 IGSF1Q8N6C5 1336 aa18.75■□□□□ 0.59
TCEA3-201ENST00000374601 U2SURPO15042 1029 aaKnown RBP18.75■□□□□ 0.59
TCEA3-201ENST00000374601 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
TCEA3-201ENST00000374601 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
TCEA3-201ENST00000374601 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
TCEA3-201ENST00000374601 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
TCEA3-201ENST00000374601 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
TCEA3-201ENST00000374601 EYA1Q99502 592 aa18.74■□□□□ 0.59
TCEA3-201ENST00000374601 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
TCEA3-201ENST00000374601 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
TCEA3-201ENST00000374601 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
TCEA3-201ENST00000374601 KDRP35968 1356 aa18.73■□□□□ 0.59
TCEA3-201ENST00000374601 DLG5Q8TDM6 1919 aa18.73■□□□□ 0.59
TCEA3-201ENST00000374601 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
TCEA3-201ENST00000374601 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
TCEA3-201ENST00000374601 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
TCEA3-201ENST00000374601 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
TCEA3-201ENST00000374601 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
TCEA3-201ENST00000374601 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
TCEA3-201ENST00000374601 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
TCEA3-201ENST00000374601 STRN4Q9NRL3 753 aa18.71■□□□□ 0.59
TCEA3-201ENST00000374601 CRB1P82279 1406 aa18.71■□□□□ 0.59
TCEA3-201ENST00000374601 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
TCEA3-201ENST00000374601 HMOX1P09601 288 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
TCEA3-201ENST00000374601 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
TCEA3-201ENST00000374601 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 SHANK3Q9BYB0 1731 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
TCEA3-201ENST00000374601 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
TCEA3-201ENST00000374601 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
TCEA3-201ENST00000374601 VIRMAQ69YN4 1812 aaKnown RBP18.69■□□□□ 0.58
TCEA3-201ENST00000374601 EVA1CP58658 441 aa18.68■□□□□ 0.58
TCEA3-201ENST00000374601 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
TCEA3-201ENST00000374601 MEGF6O75095 1541 aa18.67■□□□□ 0.58
TCEA3-201ENST00000374601 AFF2P51816 1311 aa18.67■□□□□ 0.58
TCEA3-201ENST00000374601 FCHSD2O94868 740 aa18.66■□□□□ 0.58
TCEA3-201ENST00000374601 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
TCEA3-201ENST00000374601 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
TCEA3-201ENST00000374601 PLEKHF1Q96S99 279 aa18.66■□□□□ 0.58
TCEA3-201ENST00000374601 GLI3P10071 1580 aa18.66■□□□□ 0.58
TCEA3-201ENST00000374601 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
TCEA3-201ENST00000374601 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
TCEA3-201ENST00000374601 USP21Q9UK80 565 aa18.64■□□□□ 0.57
TCEA3-201ENST00000374601 DISP2A7MBM2 1401 aa18.64■□□□□ 0.57
TCEA3-201ENST00000374601 ATRNO75882 1429 aa18.64■□□□□ 0.57
TCEA3-201ENST00000374601 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
TCEA3-201ENST00000374601 VPS72Q15906 364 aa18.62■□□□□ 0.57
TCEA3-201ENST00000374601 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
TCEA3-201ENST00000374601 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
TCEA3-201ENST00000374601 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
TCEA3-201ENST00000374601 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
TCEA3-201ENST00000374601 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
TCEA3-201ENST00000374601 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
TCEA3-201ENST00000374601 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.56
TCEA3-201ENST00000374601 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms