RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 ZSCAN29Q8IWY8 852 aaPredicted RBP17.23■□□□□ 0.35
SNX30-201ENST00000374232 CWC15Q9P013 229 aaKnown RBP17.23■□□□□ 0.35
SNX30-201ENST00000374232 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
SNX30-201ENST00000374232 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
SNX30-201ENST00000374232 TNNT1P13805 278 aa17.22■□□□□ 0.35
SNX30-201ENST00000374232 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
SNX30-201ENST00000374232 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
SNX30-201ENST00000374232 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 CCDC113Q9H0I3 377 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 CCDC69A6NI79 296 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
SNX30-201ENST00000374232 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.34
SNX30-201ENST00000374232 NEBLO76041 1014 aa17.2■□□□□ 0.34
SNX30-201ENST00000374232 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
SNX30-201ENST00000374232 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
SNX30-201ENST00000374232 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
SNX30-201ENST00000374232 PSMD1Q99460 953 aa17.2■□□□□ 0.34
SNX30-201ENST00000374232 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
SNX30-201ENST00000374232 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
SNX30-201ENST00000374232 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
SNX30-201ENST00000374232 ERLIN2O94905 339 aa17.19■□□□□ 0.34
SNX30-201ENST00000374232 GRPEL1Q9HAV7 217 aa17.19■□□□□ 0.34
SNX30-201ENST00000374232 LARP1BQ659C4 914 aaKnown RBP17.19■□□□□ 0.34
SNX30-201ENST00000374232 SYCE3A1L190 88 aa17.18■□□□□ 0.34
SNX30-201ENST00000374232 RRS1Q15050 365 aaKnown RBP17.18■□□□□ 0.34
SNX30-201ENST00000374232 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
SNX30-201ENST00000374232 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
SNX30-201ENST00000374232 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
SNX30-201ENST00000374232 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
SNX30-201ENST00000374232 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
SNX30-201ENST00000374232 AACSQ86V21 672 aa17.18■□□□□ 0.34
SNX30-201ENST00000374232 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 KLHL10Q6JEL2 608 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX30-201ENST00000374232 ZNHIT6Q9NWK9 470 aaKnown RBP17.17■□□□□ 0.34
SNX30-201ENST00000374232 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 WIZO95785 1651 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
SNX30-201ENST00000374232 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
SNX30-201ENST00000374232 KIAA0754O94854 1291 aa17.16■□□□□ 0.34
SNX30-201ENST00000374232 ZNF396Q96N95 335 aaPredicted RBP17.16■□□□□ 0.34
SNX30-201ENST00000374232 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
SNX30-201ENST00000374232 GNAI2P04899 355 aa17.16■□□□□ 0.34
SNX30-201ENST00000374232 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
SNX30-201ENST00000374232 POLR3GO15318 223 aaPredicted RBP17.15■□□□□ 0.34
SNX30-201ENST00000374232 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
SNX30-201ENST00000374232 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
SNX30-201ENST00000374232 LIG1P18858 919 aa17.15■□□□□ 0.34
SNX30-201ENST00000374232 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.34
SNX30-201ENST00000374232 TRMT1Q9NXH9 659 aaKnown RBP17.14■□□□□ 0.34
SNX30-201ENST00000374232 CCDC7Q96M83 1385 aa17.14■□□□□ 0.34
SNX30-201ENST00000374232 KIAA1328Q86T90 577 aa17.14■□□□□ 0.33
SNX30-201ENST00000374232 SPATA32Q96LK8 384 aa17.14■□□□□ 0.33
SNX30-201ENST00000374232 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
SNX30-201ENST00000374232 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
SNX30-201ENST00000374232 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
SNX30-201ENST00000374232 NBPF1Q3BBV0 1214 aa17.14■□□□□ 0.33
SNX30-201ENST00000374232 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
SNX30-201ENST00000374232 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 ZNF76P36508 570 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 CPLX3Q8WVH0 158 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 GBP2P32456 591 aaPredicted RBP17.13■□□□□ 0.33
SNX30-201ENST00000374232 CCDC66A2RUB6 948 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 TERF1P54274 439 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 CABP4P57796 275 aa17.13■□□□□ 0.33
SNX30-201ENST00000374232 ECM2O94769 699 aaPredicted RBP17.13■□□□□ 0.33
SNX30-201ENST00000374232 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
SNX30-201ENST00000374232 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
SNX30-201ENST00000374232 TDO2P48775 406 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 PDRG1Q9NUG6 133 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
SNX30-201ENST00000374232 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
SNX30-201ENST00000374232 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
SNX30-201ENST00000374232 ANKRD18AQ8IVF6 992 aa17.11■□□□□ 0.33
SNX30-201ENST00000374232 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
SNX30-201ENST00000374232 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
SNX30-201ENST00000374232 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
SNX30-201ENST00000374232 MPHOSPH8Q99549 860 aa17.1■□□□□ 0.33
SNX30-201ENST00000374232 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
SNX30-201ENST00000374232 ABCF2Q9UG63 623 aa17.1■□□□□ 0.33
SNX30-201ENST00000374232 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
SNX30-201ENST00000374232 STIM1Q13586 685 aa17.09■□□□□ 0.33
SNX30-201ENST00000374232 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
SNX30-201ENST00000374232 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
SNX30-201ENST00000374232 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms