RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 PTSQ03393 145 aa9.22□□□□□ -0.93
LINC00474-201ENST00000374014 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
LINC00474-201ENST00000374014 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.94
LINC00474-201ENST00000374014 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
LINC00474-201ENST00000374014 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
LINC00474-201ENST00000374014 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
LINC00474-201ENST00000374014 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 CBLBQ13191 982 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 Q6ZVU0 165 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 CNTNAP3BQ96NU0 1288 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 CNTNAP3Q9BZ76 1288 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
LINC00474-201ENST00000374014 SPINT1O43278 529 aa9.18□□□□□ -0.94
LINC00474-201ENST00000374014 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
LINC00474-201ENST00000374014 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
LINC00474-201ENST00000374014 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
LINC00474-201ENST00000374014 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
LINC00474-201ENST00000374014 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
LINC00474-201ENST00000374014 CCDC155Q8N6L0 562 aa9.17□□□□□ -0.94
LINC00474-201ENST00000374014 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
LINC00474-201ENST00000374014 COL25A1Q9BXS0 654 aaPredicted RBP9.17□□□□□ -0.94
LINC00474-201ENST00000374014 POLR3EQ9NVU0 708 aa9.17□□□□□ -0.94
LINC00474-201ENST00000374014 ARHGAP9Q9BRR9 750 aa9.16□□□□□ -0.94
LINC00474-201ENST00000374014 ADAMTS8Q9UP79 889 aa9.16□□□□□ -0.94
LINC00474-201ENST00000374014 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
LINC00474-201ENST00000374014 TMEM151AQ8N4L1 468 aa9.15□□□□□ -0.94
LINC00474-201ENST00000374014 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.94
LINC00474-201ENST00000374014 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
LINC00474-201ENST00000374014 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
LINC00474-201ENST00000374014 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
LINC00474-201ENST00000374014 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.95
LINC00474-201ENST00000374014 SLC35F4A4IF30 521 aa9.14□□□□□ -0.95
LINC00474-201ENST00000374014 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
LINC00474-201ENST00000374014 GDF11O95390 407 aa9.13□□□□□ -0.95
LINC00474-201ENST00000374014 RASSF7Q02833 373 aa9.13□□□□□ -0.95
LINC00474-201ENST00000374014 RNFT1Q5M7Z0 435 aa9.13□□□□□ -0.95
LINC00474-201ENST00000374014 ZBTB33Q86T24 672 aa9.13□□□□□ -0.95
LINC00474-201ENST00000374014 LRRN4Q8WUT4 740 aa9.13□□□□□ -0.95
LINC00474-201ENST00000374014 RNF225M0QZC1 329 aaPredicted RBP9.12□□□□□ -0.95
LINC00474-201ENST00000374014 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
LINC00474-201ENST00000374014 ZNF385CQ66K41 422 aaPredicted RBP9.12□□□□□ -0.95
LINC00474-201ENST00000374014 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
LINC00474-201ENST00000374014 ITGA6P23229 1130 aa9.11□□□□□ -0.95
LINC00474-201ENST00000374014 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
LINC00474-201ENST00000374014 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
LINC00474-201ENST00000374014 ZC3H4Q9UPT8 1303 aaKnown RBP9.1□□□□□ -0.95
LINC00474-201ENST00000374014 SHROOM4Q9ULL8 1493 aa9.1□□□□□ -0.95
LINC00474-201ENST00000374014 RELBQ01201 579 aa9.1□□□□□ -0.95
LINC00474-201ENST00000374014 NR6A1Q15406 480 aa9.1□□□□□ -0.95
LINC00474-201ENST00000374014 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
LINC00474-201ENST00000374014 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
LINC00474-201ENST00000374014 SLURP2P0DP57 97 aa9.09□□□□□ -0.95
LINC00474-201ENST00000374014 SV2AQ7L0J3 742 aa9.09□□□□□ -0.95
LINC00474-201ENST00000374014 OCSTAMPQ9BR26 566 aa9.09□□□□□ -0.95
LINC00474-201ENST00000374014 CDC14CA4D256 554 aa9.08□□□□□ -0.96
LINC00474-201ENST00000374014 PTK2Q05397 1052 aa9.08□□□□□ -0.96
LINC00474-201ENST00000374014 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
LINC00474-201ENST00000374014 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
LINC00474-201ENST00000374014 ADAM32Q8TC27 787 aa9.07□□□□□ -0.96
LINC00474-201ENST00000374014 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
LINC00474-201ENST00000374014 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
LINC00474-201ENST00000374014 GPSM3Q9Y4H4 160 aa9.07□□□□□ -0.96
LINC00474-201ENST00000374014 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
LINC00474-201ENST00000374014 SKIV2LQ15477 1246 aaKnown RBP9.06□□□□□ -0.96
LINC00474-201ENST00000374014 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
LINC00474-201ENST00000374014 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
LINC00474-201ENST00000374014 NBPF20Q3BBV1 942 aa9.05□□□□□ -0.96
LINC00474-201ENST00000374014 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
LINC00474-201ENST00000374014 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
LINC00474-201ENST00000374014 SH3D19Q5HYK7 790 aa9.03□□□□□ -0.96
LINC00474-201ENST00000374014 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
LINC00474-201ENST00000374014 PROCA1Q8NCQ7 364 aaPredicted RBP9.03□□□□□ -0.96
LINC00474-201ENST00000374014 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00474-201ENST00000374014 ADH1AP07327 375 aa9.02□□□□□ -0.97
LINC00474-201ENST00000374014 IRS1P35568 1242 aa9.02□□□□□ -0.97
LINC00474-201ENST00000374014 RAB15P59190 212 aa9.02□□□□□ -0.97
LINC00474-201ENST00000374014 LILRA1O75019 489 aa9.01□□□□□ -0.97
LINC00474-201ENST00000374014 AP1G2O75843 785 aa9.01□□□□□ -0.97
LINC00474-201ENST00000374014 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
LINC00474-201ENST00000374014 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
LINC00474-201ENST00000374014 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
LINC00474-201ENST00000374014 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
LINC00474-201ENST00000374014 ATP1B4Q9UN42 357 aaPredicted RBP9.01□□□□□ -0.97
LINC00474-201ENST00000374014 ERVH48-1M5A8F1 160 aa9□□□□□ -0.97
LINC00474-201ENST00000374014 ADAMTS2O95450 1211 aa9□□□□□ -0.97
LINC00474-201ENST00000374014 PTGIRP43119 386 aa9□□□□□ -0.97
LINC00474-201ENST00000374014 KDF1Q8NAX2 398 aaPredicted RBP9□□□□□ -0.97
LINC00474-201ENST00000374014 DNMT3AQ9Y6K1 912 aaPredicted RBP9□□□□□ -0.97
LINC00474-201ENST00000374014 LYPD4Q6UWN0 246 aa8.99□□□□□ -0.97
LINC00474-201ENST00000374014 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
LINC00474-201ENST00000374014 PNMA1Q8ND90 353 aa8.99□□□□□ -0.97
LINC00474-201ENST00000374014 ESPNB1AK53 854 aa8.98□□□□□ -0.97
LINC00474-201ENST00000374014 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
LINC00474-201ENST00000374014 GPAT2Q6NUI2 795 aa8.98□□□□□ -0.97
LINC00474-201ENST00000374014 KANK3Q6NY19 840 aa8.98□□□□□ -0.97
LINC00474-201ENST00000374014 LYSMD3Q7Z3D4 306 aa8.98□□□□□ -0.97
LINC00474-201ENST00000374014 SCARF2Q96GP6 870 aaPredicted RBP8.98□□□□□ -0.97
LINC00474-201ENST00000374014 CUEDC1Q9NWM3 386 aaPredicted RBP8.98□□□□□ -0.97
LINC00474-201ENST00000374014 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
LINC00474-201ENST00000374014 IGHA1P01876 353 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms