RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
A1CF-203ENST00000373995 CPDO75976 1380 aa16.68■□□□□ 0.26
A1CF-203ENST00000373995 LRP6O75581 1613 aa16.68■□□□□ 0.26
A1CF-203ENST00000373995 ILDR1Q86SU0 546 aaPredicted RBP16.68■□□□□ 0.26
A1CF-203ENST00000373995 FBLN1P23142 703 aa16.67■□□□□ 0.26
A1CF-203ENST00000373995 GLIPR1L2Q4G1C9 344 aa16.67■□□□□ 0.26
A1CF-203ENST00000373995 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
A1CF-203ENST00000373995 SOX12O15370 315 aa16.66■□□□□ 0.26
A1CF-203ENST00000373995 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
A1CF-203ENST00000373995 RALBP1Q15311 655 aa16.66■□□□□ 0.26
A1CF-203ENST00000373995 ARHGEF25Q86VW2 580 aa16.66■□□□□ 0.26
A1CF-203ENST00000373995 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
A1CF-203ENST00000373995 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
A1CF-203ENST00000373995 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
A1CF-203ENST00000373995 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
A1CF-203ENST00000373995 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
A1CF-203ENST00000373995 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 NUTM2BA6NNL0 878 aaPredicted RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 NUTM2EB1AL46 878 aaPredicted RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
A1CF-203ENST00000373995 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
A1CF-203ENST00000373995 ABCC6O95255 1503 aa16.62■□□□□ 0.25
A1CF-203ENST00000373995 LTN1O94822 1766 aa16.62■□□□□ 0.25
A1CF-203ENST00000373995 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
A1CF-203ENST00000373995 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
A1CF-203ENST00000373995 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
A1CF-203ENST00000373995 COL18A1P39060 1754 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 ADAMTS2O95450 1211 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 PEAK1Q9H792 1746 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 ANP32CO43423 234 aa16.61■□□□□ 0.25
A1CF-203ENST00000373995 RBM10P98175 930 aaKnown RBP16.6■□□□□ 0.25
A1CF-203ENST00000373995 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
A1CF-203ENST00000373995 COL14A1Q05707 1796 aaKnown RBP16.59■□□□□ 0.25
A1CF-203ENST00000373995 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
A1CF-203ENST00000373995 MTHFSP49914 203 aa16.59■□□□□ 0.25
A1CF-203ENST00000373995 FLT4P35916 1363 aa16.59■□□□□ 0.25
A1CF-203ENST00000373995 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
A1CF-203ENST00000373995 CHRNA2Q15822 529 aa16.58■□□□□ 0.25
A1CF-203ENST00000373995 IP6K1Q92551 441 aa16.58■□□□□ 0.25
A1CF-203ENST00000373995 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.25
A1CF-203ENST00000373995 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.24
A1CF-203ENST00000373995 INSRP06213 1382 aa16.58■□□□□ 0.24
A1CF-203ENST00000373995 HOXC9P31274 260 aa16.58■□□□□ 0.24
A1CF-203ENST00000373995 SLIT2O94813 1529 aa16.58■□□□□ 0.24
A1CF-203ENST00000373995 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
A1CF-203ENST00000373995 AMPHP49418 695 aa16.57■□□□□ 0.24
A1CF-203ENST00000373995 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
A1CF-203ENST00000373995 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
A1CF-203ENST00000373995 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
A1CF-203ENST00000373995 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
A1CF-203ENST00000373995 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
A1CF-203ENST00000373995 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
A1CF-203ENST00000373995 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
A1CF-203ENST00000373995 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
A1CF-203ENST00000373995 NWD2Q9ULI1 1742 aa16.54■□□□□ 0.24
A1CF-203ENST00000373995 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
A1CF-203ENST00000373995 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
A1CF-203ENST00000373995 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
A1CF-203ENST00000373995 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
A1CF-203ENST00000373995 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
A1CF-203ENST00000373995 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
A1CF-203ENST00000373995 ERBB3P21860 1342 aa16.53■□□□□ 0.24
A1CF-203ENST00000373995 NRAPQ86VF7 1730 aa16.53■□□□□ 0.24
A1CF-203ENST00000373995 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
A1CF-203ENST00000373995 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
A1CF-203ENST00000373995 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
A1CF-203ENST00000373995 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
A1CF-203ENST00000373995 ANKRD24Q8TF21 1146 aa16.5■□□□□ 0.23
A1CF-203ENST00000373995 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
A1CF-203ENST00000373995 AFF2P51816 1311 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 IL13P35225 146 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 MIER1Q8N108 512 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
A1CF-203ENST00000373995 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
A1CF-203ENST00000373995 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
A1CF-203ENST00000373995 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
A1CF-203ENST00000373995 USP21Q9UK80 565 aa16.48■□□□□ 0.23
A1CF-203ENST00000373995 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
A1CF-203ENST00000373995 FAM208AQ9UK61 1670 aaKnown RBP16.47■□□□□ 0.23
A1CF-203ENST00000373995 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
A1CF-203ENST00000373995 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
A1CF-203ENST00000373995 CRB1P82279 1406 aa16.46■□□□□ 0.23
A1CF-203ENST00000373995 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
A1CF-203ENST00000373995 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
A1CF-203ENST00000373995 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
A1CF-203ENST00000373995 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
A1CF-203ENST00000373995 EVA1CP58658 441 aa16.46■□□□□ 0.23
A1CF-203ENST00000373995 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
A1CF-203ENST00000373995 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
A1CF-203ENST00000373995 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
A1CF-203ENST00000373995 VPS72Q15906 364 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms