RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 FAM98CQ17RN3 349 aaKnown RBP29.59■■■□□ 2.33
TMEM54-202ENST00000373463 UPF1Q92900 1129 aaKnown RBP eCLIP29.59■■■□□ 2.33
TMEM54-202ENST00000373463 KIF20BQ96Q89 1820 aa29.58■■■□□ 2.33
TMEM54-202ENST00000373463 FYB1O15117 783 aa29.56■■■□□ 2.32
TMEM54-202ENST00000373463 ABCC6O95255 1503 aa29.55■■■□□ 2.32
TMEM54-202ENST00000373463 EVA1CP58658 441 aa29.55■■■□□ 2.32
TMEM54-202ENST00000373463 NSD3Q9BZ95 1437 aa29.54■■■□□ 2.32
TMEM54-202ENST00000373463 POLR3GLQ9BT43 218 aa29.54■■■□□ 2.32
TMEM54-202ENST00000373463 GGNBP2Q9H3C7 697 aa29.52■■■□□ 2.32
TMEM54-202ENST00000373463 FBLN1P23142 703 aa29.51■■■□□ 2.31
TMEM54-202ENST00000373463 CRB1P82279 1406 aa29.51■■■□□ 2.31
TMEM54-202ENST00000373463 COG3Q96JB2 828 aa29.5■■■□□ 2.31
TMEM54-202ENST00000373463 USP35Q9P2H5 1018 aa29.5■■■□□ 2.31
TMEM54-202ENST00000373463 EP400Q96L91 3159 aa29.49■■■□□ 2.31
TMEM54-202ENST00000373463 WDR17Q8IZU2 1322 aa29.47■■■□□ 2.31
TMEM54-202ENST00000373463 BARGINQ6ZT62 677 aa29.47■■■□□ 2.31
TMEM54-202ENST00000373463 KIF7Q2M1P5 1343 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 WNK3Q9BYP7 1800 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 A0A0G2JS52 829 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 MYT1Q01538 1121 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 KRT27Q7Z3Y8 459 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 TCP11L2Q8N4U5 519 aa29.45■■■□□ 2.31
TMEM54-202ENST00000373463 MAP3K19Q56UN5 1328 aa29.44■■■□□ 2.3
TMEM54-202ENST00000373463 PARP4Q9UKK3 1724 aaKnown RBP29.42■■■□□ 2.3
TMEM54-202ENST00000373463 PANK3Q9H999 370 aa29.42■■■□□ 2.3
TMEM54-202ENST00000373463 TOM1L2Q6ZVM7 507 aa29.41■■■□□ 2.3
TMEM54-202ENST00000373463 THRAP3Q9Y2W1 955 aaKnown RBP29.41■■■□□ 2.3
TMEM54-202ENST00000373463 ERBB3P21860 1342 aa29.41■■■□□ 2.3
TMEM54-202ENST00000373463 PEAK1Q9H792 1746 aa29.4■■■□□ 2.3
TMEM54-202ENST00000373463 ANKRD26Q9UPS8 1709 aa29.4■■■□□ 2.3
TMEM54-202ENST00000373463 FAM182BQ5T319 152 aa29.39■■■□□ 2.3
TMEM54-202ENST00000373463 IP6K1Q92551 441 aa29.39■■■□□ 2.3
TMEM54-202ENST00000373463 LRRC37A3O60309 1634 aa29.38■■■□□ 2.29
TMEM54-202ENST00000373463 BLMP54132 1417 aaPredicted RBP29.38■■■□□ 2.29
TMEM54-202ENST00000373463 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
TMEM54-202ENST00000373463 CARD10Q9BWT7 1032 aa29.37■■■□□ 2.29
TMEM54-202ENST00000373463 CGNL1Q0VF96 1302 aa29.37■■■□□ 2.29
TMEM54-202ENST00000373463 DISP2A7MBM2 1401 aa29.37■■■□□ 2.29
TMEM54-202ENST00000373463 ANKRD24Q8TF21 1146 aa29.36■■■□□ 2.29
TMEM54-202ENST00000373463 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
TMEM54-202ENST00000373463 HOXC9P31274 260 aa29.35■■■□□ 2.29
TMEM54-202ENST00000373463 RGPD2P0DJD1 1756 aa29.33■■■□□ 2.29
TMEM54-202ENST00000373463 FAM208AQ9UK61 1670 aaKnown RBP29.32■■■□□ 2.28
TMEM54-202ENST00000373463 RTL1A6NKG5 1358 aa29.32■■■□□ 2.28
TMEM54-202ENST00000373463 CCDC7Q96M83 1385 aa29.32■■■□□ 2.28
TMEM54-202ENST00000373463 WASHC2AQ641Q2 1341 aa29.32■■■□□ 2.28
TMEM54-202ENST00000373463 AMPHP49418 695 aa29.3■■■□□ 2.28
TMEM54-202ENST00000373463 NLRP2Q9NX02 1062 aa29.28■■■□□ 2.28
TMEM54-202ENST00000373463 MAP2P11137 1827 aaKnown RBP29.28■■■□□ 2.28
TMEM54-202ENST00000373463 LTV1Q96GA3 475 aaPredicted RBP29.27■■■□□ 2.28
TMEM54-202ENST00000373463 EMILIN1Q9Y6C2 1016 aa29.27■■■□□ 2.28
TMEM54-202ENST00000373463 TNS1Q9HBL0 1735 aaKnown RBP29.26■■■□□ 2.27
TMEM54-202ENST00000373463 CCDC125Q86Z20 511 aa29.26■■■□□ 2.27
TMEM54-202ENST00000373463 PDE3BQ13370 1112 aa29.25■■■□□ 2.27
TMEM54-202ENST00000373463 RGPD1P0DJD0 1748 aa29.24■■■□□ 2.27
TMEM54-202ENST00000373463 HSP90AB2PQ58FF8 381 aa29.24■■■□□ 2.27
TMEM54-202ENST00000373463 INSRP06213 1382 aa29.24■■■□□ 2.27
TMEM54-202ENST00000373463 FLT4P35916 1363 aa29.24■■■□□ 2.27
TMEM54-202ENST00000373463 KIF24Q5T7B8 1368 aa29.24■■■□□ 2.27
TMEM54-202ENST00000373463 NSD2O96028 1365 aa29.23■■■□□ 2.27
TMEM54-202ENST00000373463 PER1O15534 1290 aaPredicted RBP29.22■■■□□ 2.27
TMEM54-202ENST00000373463 DDB1Q16531 1140 aa29.22■■■□□ 2.27
TMEM54-202ENST00000373463 CDCA7Q9BWT1 371 aaPredicted RBP29.22■■■□□ 2.27
TMEM54-202ENST00000373463 AMER1Q5JTC6 1135 aaPredicted RBP29.21■■■□□ 2.27
TMEM54-202ENST00000373463 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
TMEM54-202ENST00000373463 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.26
TMEM54-202ENST00000373463 TNS2Q63HR2 1409 aa29.2■■■□□ 2.26
TMEM54-202ENST00000373463 DEFB132Q7Z7B7 95 aa29.19■■■□□ 2.26
TMEM54-202ENST00000373463 MARCH10Q8NA82 808 aaPredicted RBP29.19■■■□□ 2.26
TMEM54-202ENST00000373463 KNSTRNQ9Y448 316 aa29.19■■■□□ 2.26
TMEM54-202ENST00000373463 SBF2Q86WG5 1849 aa29.18■■■□□ 2.26
TMEM54-202ENST00000373463 TNNT2P45379 298 aaPredicted RBP29.18■■■□□ 2.26
TMEM54-202ENST00000373463 NBPF6Q5VWK0 638 aa29.17■■■□□ 2.26
TMEM54-202ENST00000373463 NBPF4Q96M43 638 aa29.17■■■□□ 2.26
TMEM54-202ENST00000373463 IL2RBP14784 551 aa29.16■■■□□ 2.26
TMEM54-202ENST00000373463 OVOS2A0A0G2JMS6 1433 aa29.16■■■□□ 2.26
TMEM54-202ENST00000373463 SMG6Q86US8 1419 aaKnown RBP29.14■■■□□ 2.26
TMEM54-202ENST00000373463 TRIM37O94972 964 aa29.14■■■□□ 2.26
TMEM54-202ENST00000373463 MEGF6O75095 1541 aa29.14■■■□□ 2.25
TMEM54-202ENST00000373463 PPM1GO15355 546 aaPredicted RBP29.13■■■□□ 2.25
TMEM54-202ENST00000373463 SHANK3Q9BYB0 1731 aa29.13■■■□□ 2.25
TMEM54-202ENST00000373463 EXOC5O00471 708 aa29.12■■■□□ 2.25
TMEM54-202ENST00000373463 USHBP1Q8N6Y0 703 aa29.12■■■□□ 2.25
TMEM54-202ENST00000373463 BCL9O00512 1426 aa29.11■■■□□ 2.25
TMEM54-202ENST00000373463 MORC1Q86VD1 984 aa29.11■■■□□ 2.25
TMEM54-202ENST00000373463 SF3B2Q13435 895 aaKnown RBP29.1■■■□□ 2.25
TMEM54-202ENST00000373463 NCAPD2Q15021 1401 aa29.1■■■□□ 2.25
TMEM54-202ENST00000373463 PTF1AQ7RTS3 328 aa29.08■■■□□ 2.25
TMEM54-202ENST00000373463 EN1Q05925 392 aaPredicted RBP29.06■■■□□ 2.24
TMEM54-202ENST00000373463 BAG6P46379 1132 aa29.05■■■□□ 2.24
TMEM54-202ENST00000373463 NPC1L1Q9UHC9 1359 aa29.04■■■□□ 2.24
TMEM54-202ENST00000373463 CC2D1BQ5T0F9 858 aaKnown RBP29.04■■■□□ 2.24
TMEM54-202ENST00000373463 EIF4A2Q14240 407 aaKnown RBP29.03■■■□□ 2.24
TMEM54-202ENST00000373463 EYA1Q99502 592 aa29.02■■■□□ 2.24
TMEM54-202ENST00000373463 NHSQ6T4R5 1651 aa29.02■■■□□ 2.24
TMEM54-202ENST00000373463 APBA3O96018 575 aa29.01■■■□□ 2.23
TMEM54-202ENST00000373463 CAMKK2Q96RR4 588 aa29.01■■■□□ 2.23
TMEM54-202ENST00000373463 RREB1Q92766 1687 aa29■■■□□ 2.23
TMEM54-202ENST00000373463 EZH2Q15910 746 aaKnown RBP28.99■■■□□ 2.23
TMEM54-202ENST00000373463 PKD1L3Q7Z443 1732 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms