RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
TRAPPC3-203ENST00000373163 MTFR1LQ9H019 292 aa23.06■■□□□ 1.28
TRAPPC3-203ENST00000373163 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
TRAPPC3-203ENST00000373163 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
TRAPPC3-203ENST00000373163 MARCH10Q8NA82 808 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC3-203ENST00000373163 BCL9O00512 1426 aa23.05■■□□□ 1.28
TRAPPC3-203ENST00000373163 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
TRAPPC3-203ENST00000373163 SGIP1Q9BQI5 828 aa23.03■■□□□ 1.28
TRAPPC3-203ENST00000373163 UTRNP46939 3433 aa23.03■■□□□ 1.28
TRAPPC3-203ENST00000373163 CDCA7Q9BWT1 371 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC3-203ENST00000373163 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
TRAPPC3-203ENST00000373163 ARXQ96QS3 562 aa22.99■■□□□ 1.27
TRAPPC3-203ENST00000373163 WDR17Q8IZU2 1322 aa22.99■■□□□ 1.27
TRAPPC3-203ENST00000373163 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC3-203ENST00000373163 NLRP6P59044 892 aa22.98■■□□□ 1.27
TRAPPC3-203ENST00000373163 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
TRAPPC3-203ENST00000373163 MAP3K5Q99683 1374 aa22.97■■□□□ 1.27
TRAPPC3-203ENST00000373163 SLIT3O75094 1523 aa22.97■■□□□ 1.27
TRAPPC3-203ENST00000373163 GIGYF1O75420 1035 aaPredicted RBP22.96■■□□□ 1.27
TRAPPC3-203ENST00000373163 AXIN2Q9Y2T1 843 aa22.96■■□□□ 1.27
TRAPPC3-203ENST00000373163 GPR162Q16538 588 aa22.94■■□□□ 1.26
TRAPPC3-203ENST00000373163 USP6P35125 1406 aa22.93■■□□□ 1.26
TRAPPC3-203ENST00000373163 EXOC5O00471 708 aa22.92■■□□□ 1.26
TRAPPC3-203ENST00000373163 CARD10Q9BWT7 1032 aa22.92■■□□□ 1.26
TRAPPC3-203ENST00000373163 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
TRAPPC3-203ENST00000373163 CHD4Q14839 1912 aa22.92■■□□□ 1.26
TRAPPC3-203ENST00000373163 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
TRAPPC3-203ENST00000373163 RAB3GAP2Q9H2M9 1393 aa22.91■■□□□ 1.26
TRAPPC3-203ENST00000373163 CSB-PGBD3P0DP91 1061 aa22.91■■□□□ 1.26
TRAPPC3-203ENST00000373163 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
TRAPPC3-203ENST00000373163 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
TRAPPC3-203ENST00000373163 COL18A1P39060 1754 aa22.89■■□□□ 1.26
TRAPPC3-203ENST00000373163 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
TRAPPC3-203ENST00000373163 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
TRAPPC3-203ENST00000373163 TNS2Q63HR2 1409 aa22.87■■□□□ 1.25
TRAPPC3-203ENST00000373163 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
TRAPPC3-203ENST00000373163 CENPJQ9HC77 1338 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC3-203ENST00000373163 ZNF827Q17R98 1081 aa22.85■■□□□ 1.25
TRAPPC3-203ENST00000373163 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
TRAPPC3-203ENST00000373163 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
TRAPPC3-203ENST00000373163 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
TRAPPC3-203ENST00000373163 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
TRAPPC3-203ENST00000373163 KCNH5Q8NCM2 988 aa22.84■■□□□ 1.25
TRAPPC3-203ENST00000373163 PIK3C2AO00443 1686 aa22.84■■□□□ 1.25
TRAPPC3-203ENST00000373163 SOX12O15370 315 aa22.83■■□□□ 1.25
TRAPPC3-203ENST00000373163 NBPF1Q3BBV0 1214 aa22.83■■□□□ 1.25
TRAPPC3-203ENST00000373163 NHSQ6T4R5 1651 aa22.83■■□□□ 1.24
TRAPPC3-203ENST00000373163 TRPM1Q7Z4N2 1603 aa22.8■■□□□ 1.24
TRAPPC3-203ENST00000373163 POLD1P28340 1107 aa22.8■■□□□ 1.24
TRAPPC3-203ENST00000373163 SLC16A10Q8TF71 515 aa22.79■■□□□ 1.24
TRAPPC3-203ENST00000373163 LRRC4BQ9NT99 713 aa22.79■■□□□ 1.24
TRAPPC3-203ENST00000373163 KIAA1210Q9ULL0 1709 aa22.79■■□□□ 1.24
TRAPPC3-203ENST00000373163 ABCC6O95255 1503 aa22.78■■□□□ 1.24
TRAPPC3-203ENST00000373163 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.24
TRAPPC3-203ENST00000373163 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
TRAPPC3-203ENST00000373163 TTC21BQ7Z4L5 1316 aa22.77■■□□□ 1.24
TRAPPC3-203ENST00000373163 NLGN2Q8NFZ4 835 aa22.76■■□□□ 1.23
TRAPPC3-203ENST00000373163 AKT1S1Q96B36 256 aa22.76■■□□□ 1.23
TRAPPC3-203ENST00000373163 ZNF692Q9BU19 519 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC3-203ENST00000373163 NFAT5O94916 1531 aa22.73■■□□□ 1.23
TRAPPC3-203ENST00000373163 IL2RBP14784 551 aa22.73■■□□□ 1.23
TRAPPC3-203ENST00000373163 PNPLA7Q6ZV29 1317 aa22.73■■□□□ 1.23
TRAPPC3-203ENST00000373163 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
TRAPPC3-203ENST00000373163 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
TRAPPC3-203ENST00000373163 GRIN3BO60391 1043 aa22.72■■□□□ 1.23
TRAPPC3-203ENST00000373163 SLC27A3Q5K4L6 730 aa22.72■■□□□ 1.23
TRAPPC3-203ENST00000373163 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
TRAPPC3-203ENST00000373163 ERBB3P21860 1342 aa22.71■■□□□ 1.23
TRAPPC3-203ENST00000373163 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
TRAPPC3-203ENST00000373163 YBX3P16989 372 aaKnown RBP eCLIP22.7■■□□□ 1.229e-6■■■□□ 18.1
TRAPPC3-203ENST00000373163 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
TRAPPC3-203ENST00000373163 BTAF1O14981 1849 aa22.7■■□□□ 1.22
TRAPPC3-203ENST00000373163 ATP10DQ9P241 1426 aa22.67■■□□□ 1.22
TRAPPC3-203ENST00000373163 CEP350Q5VT06 3117 aa22.67■■□□□ 1.22
TRAPPC3-203ENST00000373163 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
TRAPPC3-203ENST00000373163 GOLGB1Q14789 3259 aaKnown RBP22.65■■□□□ 1.22
TRAPPC3-203ENST00000373163 KCNQ4P56696 695 aa22.64■■□□□ 1.21
TRAPPC3-203ENST00000373163 QSER1Q2KHR3 1735 aa22.64■■□□□ 1.21
TRAPPC3-203ENST00000373163 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
TRAPPC3-203ENST00000373163 HSPA6P17066 643 aa22.63■■□□□ 1.21
TRAPPC3-203ENST00000373163 GPBP1L1Q9HC44 474 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC3-203ENST00000373163 ANKRD24Q8TF21 1146 aa22.62■■□□□ 1.21
TRAPPC3-203ENST00000373163 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
TRAPPC3-203ENST00000373163 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
TRAPPC3-203ENST00000373163 USP31Q70CQ4 1352 aa22.6■■□□□ 1.21
TRAPPC3-203ENST00000373163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.59■■□□□ 1.21
TRAPPC3-203ENST00000373163 MSH5O43196 834 aa22.58■■□□□ 1.21
TRAPPC3-203ENST00000373163 PRIM1P49642 420 aaKnown RBP22.57■■□□□ 1.2
TRAPPC3-203ENST00000373163 ANKRD36BQ8N2N9 1353 aa22.56■■□□□ 1.2
TRAPPC3-203ENST00000373163 ZNF526Q8TF50 670 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC3-203ENST00000373163 ADCY9O60503 1353 aa22.55■■□□□ 1.2
TRAPPC3-203ENST00000373163 NME9Q86XW9 330 aa22.55■■□□□ 1.2
TRAPPC3-203ENST00000373163 COL23A1Q86Y22 540 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC3-203ENST00000373163 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
TRAPPC3-203ENST00000373163 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
TRAPPC3-203ENST00000373163 CCNL1Q9UK58 526 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC3-203ENST00000373163 NSD2O96028 1365 aa22.53■■□□□ 1.2
TRAPPC3-203ENST00000373163 CD2APQ9Y5K6 639 aa22.53■■□□□ 1.2
TRAPPC3-203ENST00000373163 SBNO2Q9Y2G9 1366 aa22.5■■□□□ 1.19
TRAPPC3-203ENST00000373163 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms