RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 KRT85P78386 507 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 MIA2Q96PC5 1412 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 GBP2P32456 591 aaPredicted RBP18.42■□□□□ 0.54
CHST3-201ENST00000373115 FILIP1Q7Z7B0 1213 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 WIZO95785 1651 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 CBFA2T2O43439 604 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 SPATA32Q96LK8 384 aa18.42■□□□□ 0.54
CHST3-201ENST00000373115 ERC1Q8IUD2 1116 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHST3-201ENST00000373115 KIAA1328Q86T90 577 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 NLRP6P59044 892 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 ATF3P18847 181 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
CHST3-201ENST00000373115 CAMK4Q16566 473 aa18.4■□□□□ 0.54
CHST3-201ENST00000373115 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHST3-201ENST00000373115 MATR3P43243 847 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHST3-201ENST00000373115 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
CHST3-201ENST00000373115 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.54
CHST3-201ENST00000373115 SSR1P43307 286 aaKnown RBP18.39■□□□□ 0.53
CHST3-201ENST00000373115 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.53
CHST3-201ENST00000373115 MYL6BP14649 208 aa18.38■□□□□ 0.53
CHST3-201ENST00000373115 CWC27Q6UX04 472 aaKnown RBP18.38■□□□□ 0.53
CHST3-201ENST00000373115 PDRG1Q9NUG6 133 aa18.38■□□□□ 0.53
CHST3-201ENST00000373115 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
CHST3-201ENST00000373115 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
CHST3-201ENST00000373115 NUP62CLQ9H1M0 184 aa18.38■□□□□ 0.53
CHST3-201ENST00000373115 EZRP15311 586 aaKnown RBP18.37■□□□□ 0.53
CHST3-201ENST00000373115 CBX1P83916 185 aa18.37■□□□□ 0.53
CHST3-201ENST00000373115 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
CHST3-201ENST00000373115 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
CHST3-201ENST00000373115 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
CHST3-201ENST00000373115 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 IQCEQ6IPM2 695 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 SYCE3A1L190 88 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
CHST3-201ENST00000373115 TXLNBQ8N3L3 684 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 PDCL2Q8N4E4 241 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
CHST3-201ENST00000373115 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 CCDC113Q9H0I3 377 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
CHST3-201ENST00000373115 DYDC1Q8WWB3 177 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 NOL7Q9UMY1 257 aaKnown RBP18.35■□□□□ 0.53
CHST3-201ENST00000373115 RBM5P52756 815 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHST3-201ENST00000373115 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
CHST3-201ENST00000373115 AACSQ86V21 672 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 CEP57L1Q8IYX8 460 aa18.35■□□□□ 0.53
CHST3-201ENST00000373115 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
CHST3-201ENST00000373115 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
CHST3-201ENST00000373115 INCENPQ9NQS7 918 aa18.34■□□□□ 0.53
CHST3-201ENST00000373115 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
CHST3-201ENST00000373115 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
CHST3-201ENST00000373115 BACH2Q9BYV9 841 aa18.34■□□□□ 0.53
CHST3-201ENST00000373115 DHX8Q14562 1220 aaKnown RBP18.33■□□□□ 0.53
CHST3-201ENST00000373115 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.53
CHST3-201ENST00000373115 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.53
CHST3-201ENST00000373115 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.53
CHST3-201ENST00000373115 CCDC148Q8NFR7 591 aa18.33■□□□□ 0.52
CHST3-201ENST00000373115 CFAP100Q494V2 611 aa18.33■□□□□ 0.52
CHST3-201ENST00000373115 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.52
CHST3-201ENST00000373115 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
CHST3-201ENST00000373115 ESPNB1AK53 854 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 TAF4BQ92750 862 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 NEBLO76041 1014 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 CCDC97Q96F63 343 aaPredicted RBP18.32■□□□□ 0.52
CHST3-201ENST00000373115 USP8P40818 1118 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 TICAM2Q86XR7 235 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 CFAP45Q9UL16 551 aa18.32■□□□□ 0.52
CHST3-201ENST00000373115 CASQ1P31415 396 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 JAKMIP3Q5VZ66 844 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 UBXN4Q92575 508 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 GIMAP7Q8NHV1 300 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 SMTNL1A8MU46 457 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 TDO2P48775 406 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
CHST3-201ENST00000373115 ZNF644Q9H582 1327 aaPredicted RBP18.3■□□□□ 0.52
CHST3-201ENST00000373115 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
CHST3-201ENST00000373115 MCM4P33991 863 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 USP5P45974 858 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
CHST3-201ENST00000373115 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHST3-201ENST00000373115 TRERF1Q96PN7 1200 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 IL1RAPL2Q9NP60 686 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 RRP9O43818 475 aaKnown RBP18.3■□□□□ 0.52
CHST3-201ENST00000373115 ZNF76P36508 570 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
CHST3-201ENST00000373115 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
CHST3-201ENST00000373115 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms