RNA–Protein interactions for RNA: ENST00000373040.4

RPA4-201, Transcript of replication protein A4, humanhuman

APPRIS P1 BASIC

Gene RPA4, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA4-201ENST00000373040 FLT4P35916 1363 aa14.55□□□□□ -0.08
RPA4-201ENST00000373040 FAM83GA6ND36 823 aa14.55□□□□□ -0.08
RPA4-201ENST00000373040 PRDM11Q9NQV5 511 aa14.55□□□□□ -0.08
RPA4-201ENST00000373040 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
RPA4-201ENST00000373040 ADAMTS2O95450 1211 aa14.54□□□□□ -0.08
RPA4-201ENST00000373040 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
RPA4-201ENST00000373040 RTL1A6NKG5 1358 aa14.53□□□□□ -0.08
RPA4-201ENST00000373040 COL18A1P39060 1754 aa14.53□□□□□ -0.08
RPA4-201ENST00000373040 DIAPH1O60610 1272 aaKnown RBP14.52□□□□□ -0.08
RPA4-201ENST00000373040 RGPD5Q99666 1765 aa14.52□□□□□ -0.09
RPA4-201ENST00000373040 PNISRQ8TF01 805 aaKnown RBP14.51□□□□□ -0.09
RPA4-201ENST00000373040 COL3A1P02461 1466 aaPredicted RBP14.51□□□□□ -0.09
RPA4-201ENST00000373040 IL13P35225 146 aa14.51□□□□□ -0.09
RPA4-201ENST00000373040 EIF4A2Q14240 407 aaKnown RBP14.51□□□□□ -0.09
RPA4-201ENST00000373040 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
RPA4-201ENST00000373040 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
RPA4-201ENST00000373040 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
RPA4-201ENST00000373040 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
RPA4-201ENST00000373040 ABCC6O95255 1503 aa14.49□□□□□ -0.09
RPA4-201ENST00000373040 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
RPA4-201ENST00000373040 LRP6O75581 1613 aa14.49□□□□□ -0.09
RPA4-201ENST00000373040 LMO7Q8WWI1 1683 aa14.49□□□□□ -0.09
RPA4-201ENST00000373040 CAMTA1Q9Y6Y1 1673 aa14.49□□□□□ -0.09
RPA4-201ENST00000373040 BTG4Q9NY30 223 aa14.48□□□□□ -0.09
RPA4-201ENST00000373040 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
RPA4-201ENST00000373040 FAM9BQ8IZU0 186 aa14.47□□□□□ -0.09
RPA4-201ENST00000373040 EVA1CP58658 441 aa14.47□□□□□ -0.09
RPA4-201ENST00000373040 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPA4-201ENST00000373040 NGLY1Q96IV0 654 aa14.47□□□□□ -0.09
RPA4-201ENST00000373040 C8orf37Q96NL8 207 aa14.47□□□□□ -0.09
RPA4-201ENST00000373040 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
RPA4-201ENST00000373040 U2AF1L5P0DN76 240 aaPredicted RBP14.46□□□□□ -0.09
RPA4-201ENST00000373040 U2AF1Q01081 240 aaKnown RBP eCLIP14.46□□□□□ -0.09
RPA4-201ENST00000373040 MEX3CQ5U5Q3 659 aaKnown RBP14.46□□□□□ -0.09
RPA4-201ENST00000373040 EYA1Q99502 592 aa14.46□□□□□ -0.09
RPA4-201ENST00000373040 ERBB3P21860 1342 aa14.46□□□□□ -0.09
RPA4-201ENST00000373040 CSB-PGBD3P0DP91 1061 aa14.45□□□□□ -0.1
RPA4-201ENST00000373040 NBPF6Q5VWK0 638 aa14.45□□□□□ -0.1
RPA4-201ENST00000373040 NBPF4Q96M43 638 aa14.45□□□□□ -0.1
RPA4-201ENST00000373040 COL5A2P05997 1499 aaPredicted RBP14.44□□□□□ -0.1
RPA4-201ENST00000373040 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
RPA4-201ENST00000373040 RGPD2P0DJD1 1756 aa14.44□□□□□ -0.1
RPA4-201ENST00000373040 PLCH1Q4KWH8 1693 aa14.44□□□□□ -0.1
RPA4-201ENST00000373040 SLIT2O94813 1529 aa14.44□□□□□ -0.1
RPA4-201ENST00000373040 WDR17Q8IZU2 1322 aa14.43□□□□□ -0.1
RPA4-201ENST00000373040 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
RPA4-201ENST00000373040 NLRP2Q9NX02 1062 aa14.43□□□□□ -0.1
RPA4-201ENST00000373040 IGSF1Q8N6C5 1336 aa14.43□□□□□ -0.1
RPA4-201ENST00000373040 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
RPA4-201ENST00000373040 HMOX1P09601 288 aa14.43□□□□□ -0.1
RPA4-201ENST00000373040 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
RPA4-201ENST00000373040 FCHSD2O94868 740 aa14.42□□□□□ -0.1
RPA4-201ENST00000373040 SULT6B1Q6IMI4 303 aa14.42□□□□□ -0.1
RPA4-201ENST00000373040 TOM1L2Q6ZVM7 507 aa14.42□□□□□ -0.1
RPA4-201ENST00000373040 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
RPA4-201ENST00000373040 USHBP1Q8N6Y0 703 aa14.42□□□□□ -0.1
RPA4-201ENST00000373040 NWD2Q9ULI1 1742 aa14.41□□□□□ -0.1
RPA4-201ENST00000373040 AEBP1Q8IUX7 1158 aa14.41□□□□□ -0.1
RPA4-201ENST00000373040 UNC5CLQ8IV45 518 aa14.41□□□□□ -0.1
RPA4-201ENST00000373040 NRAPQ86VF7 1730 aa14.4□□□□□ -0.1
RPA4-201ENST00000373040 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
RPA4-201ENST00000373040 USP21Q9UK80 565 aa14.4□□□□□ -0.1
RPA4-201ENST00000373040 BCL9LQ86UU0 1499 aa14.4□□□□□ -0.1
RPA4-201ENST00000373040 FAM208AQ9UK61 1670 aaKnown RBP14.4□□□□□ -0.1
RPA4-201ENST00000373040 AFF2P51816 1311 aa14.4□□□□□ -0.1
RPA4-201ENST00000373040 CARD10Q9BWT7 1032 aa14.39□□□□□ -0.11
RPA4-201ENST00000373040 CCDC146Q8IYE0 955 aa14.39□□□□□ -0.11
RPA4-201ENST00000373040 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
RPA4-201ENST00000373040 CRB1P82279 1406 aa14.38□□□□□ -0.11
RPA4-201ENST00000373040 KDRP35968 1356 aa14.38□□□□□ -0.11
RPA4-201ENST00000373040 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
RPA4-201ENST00000373040 RUNDC1Q96C34 613 aa14.38□□□□□ -0.11
RPA4-201ENST00000373040 PLEKHF1Q96S99 279 aa14.38□□□□□ -0.11
RPA4-201ENST00000373040 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
RPA4-201ENST00000373040 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
RPA4-201ENST00000373040 VPS72Q15906 364 aa14.36□□□□□ -0.11
RPA4-201ENST00000373040 CCDC9Q9Y3X0 531 aaKnown RBP14.36□□□□□ -0.11
RPA4-201ENST00000373040 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
RPA4-201ENST00000373040 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
RPA4-201ENST00000373040 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
RPA4-201ENST00000373040 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
RPA4-201ENST00000373040 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
RPA4-201ENST00000373040 NEFMP07197 916 aa14.34□□□□□ -0.11
RPA4-201ENST00000373040 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
RPA4-201ENST00000373040 RAPGEF4Q8WZA2 1011 aa14.34□□□□□ -0.11
RPA4-201ENST00000373040 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
RPA4-201ENST00000373040 MAPK8IP3Q9UPT6 1336 aa14.33□□□□□ -0.11
RPA4-201ENST00000373040 APAF1O14727 1248 aa14.33□□□□□ -0.12
RPA4-201ENST00000373040 IL2RBP14784 551 aa14.33□□□□□ -0.12
RPA4-201ENST00000373040 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.12
RPA4-201ENST00000373040 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
RPA4-201ENST00000373040 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.12
RPA4-201ENST00000373040 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
RPA4-201ENST00000373040 ATRNO75882 1429 aa14.31□□□□□ -0.12
RPA4-201ENST00000373040 PLEKHO1Q53GL0 409 aaPredicted RBP14.31□□□□□ -0.12
RPA4-201ENST00000373040 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
RPA4-201ENST00000373040 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
RPA4-201ENST00000373040 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
RPA4-201ENST00000373040 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
RPA4-201ENST00000373040 MEGF6O75095 1541 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms